RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 CRYGSP22914 178 aa18.38■□□□□ 0.53
CACNB3-210ENST00000548874 CAPZA2P47755 286 aa18.38■□□□□ 0.53
CACNB3-210ENST00000548874 HSPA13P48723 471 aa18.38■□□□□ 0.53
CACNB3-210ENST00000548874 GSG1Q2KHT4 349 aa18.38■□□□□ 0.53
CACNB3-210ENST00000548874 MEPCEQ7L2J0 689 aaKnown RBP18.38■□□□□ 0.53
CACNB3-210ENST00000548874 MDP1Q86V88 176 aa18.38■□□□□ 0.53
CACNB3-210ENST00000548874 WFDC8Q8IUA0 241 aa18.38■□□□□ 0.53
CACNB3-210ENST00000548874 ZMYND19Q96E35 227 aaPredicted RBP18.38■□□□□ 0.53
CACNB3-210ENST00000548874 RASSF1Q9NS23 344 aa18.38■□□□□ 0.53
CACNB3-210ENST00000548874 DNAJC27Q9NZQ0 273 aa18.38■□□□□ 0.53
CACNB3-210ENST00000548874 H2AFY2Q9P0M6 372 aaPredicted RBP18.38■□□□□ 0.53
CACNB3-210ENST00000548874 KCNG2Q9UJ96 466 aa18.38■□□□□ 0.53
CACNB3-210ENST00000548874 LHFPL6Q9Y693 200 aa18.38■□□□□ 0.53
CACNB3-210ENST00000548874 HSPE1-MOB4S4R3N1 261 aa18.38■□□□□ 0.53
CACNB3-210ENST00000548874 SLC22A31A6NKX4 558 aa18.37■□□□□ 0.53
CACNB3-210ENST00000548874 IGKV3-15P01624 115 aa18.37■□□□□ 0.53
CACNB3-210ENST00000548874 GNAO1P09471 354 aa18.37■□□□□ 0.53
CACNB3-210ENST00000548874 CD79AP11912 226 aa18.37■□□□□ 0.53
CACNB3-210ENST00000548874 ZNF32P17041 273 aa18.37■□□□□ 0.53
CACNB3-210ENST00000548874 GSTT1P30711 240 aa18.37■□□□□ 0.53
CACNB3-210ENST00000548874 ISL1P61371 349 aa18.37■□□□□ 0.53
CACNB3-210ENST00000548874 RPS7P62081 194 aaKnown RBP18.37■□□□□ 0.53
CACNB3-210ENST00000548874 RAB1AP62820 205 aa18.37■□□□□ 0.53
CACNB3-210ENST00000548874 PIGFQ07326 219 aa18.37■□□□□ 0.53
CACNB3-210ENST00000548874 AQP6Q13520 282 aa18.37■□□□□ 0.53
CACNB3-210ENST00000548874 MAD2L1BPQ15013 274 aaPredicted RBP18.37■□□□□ 0.53
CACNB3-210ENST00000548874 PCK2Q16822 640 aa18.37■□□□□ 0.53
CACNB3-210ENST00000548874 C3orf36Q3SXR2 165 aa18.37■□□□□ 0.53
CACNB3-210ENST00000548874 TEX30Q5JUR7 227 aa18.37■□□□□ 0.53
CACNB3-210ENST00000548874 C6orf52Q5T4I8 152 aa18.37■□□□□ 0.53
CACNB3-210ENST00000548874 LCN1P1Q5VSP4 162 aa18.37■□□□□ 0.53
CACNB3-210ENST00000548874 MEDAGQ5VYS4 303 aa18.37■□□□□ 0.53
CACNB3-210ENST00000548874 B3GLCTQ6Y288 498 aa18.37■□□□□ 0.53
CACNB3-210ENST00000548874 TIGD4Q8IY51 512 aa18.37■□□□□ 0.53
CACNB3-210ENST00000548874 SETD9Q8NE22 299 aa18.37■□□□□ 0.53
CACNB3-210ENST00000548874 OR10H5Q8NGA6 315 aa18.37■□□□□ 0.53
CACNB3-210ENST00000548874 APH1BQ8WW43 257 aa18.37■□□□□ 0.53
CACNB3-210ENST00000548874 KCNN2Q9H2S1 579 aa18.37■□□□□ 0.53
CACNB3-210ENST00000548874 WDR76Q9H967 626 aa18.37■□□□□ 0.53
CACNB3-210ENST00000548874 HAO2Q9NYQ3 351 aa18.37■□□□□ 0.53
CACNB3-210ENST00000548874 AASSQ9UDR5 926 aa18.37■□□□□ 0.53
CACNB3-210ENST00000548874 KCNN3Q9UGI6 736 aa18.37■□□□□ 0.53
CACNB3-210ENST00000548874 ENTPD6O75354 484 aa18.36■□□□□ 0.53
CACNB3-210ENST00000548874 IGLV1-44P01699 117 aa18.36■□□□□ 0.53
CACNB3-210ENST00000548874 PSKH1P11801 424 aa18.36■□□□□ 0.53
CACNB3-210ENST00000548874 ZNF823P16415 610 aa18.36■□□□□ 0.53
CACNB3-210ENST00000548874 HTR1FP30939 366 aa18.36■□□□□ 0.53
CACNB3-210ENST00000548874 ARR3P36575 388 aa18.36■□□□□ 0.53
CACNB3-210ENST00000548874 CDH11P55287 796 aa18.36■□□□□ 0.53
CACNB3-210ENST00000548874 PCBD1P61457 104 aa18.36■□□□□ 0.53
CACNB3-210ENST00000548874 HIST1H3AP68431 136 aa18.36■□□□□ 0.53
CACNB3-210ENST00000548874 ADAM8P78325 824 aa18.36■□□□□ 0.53
CACNB3-210ENST00000548874 IL5RAQ01344 420 aa18.36■□□□□ 0.53
CACNB3-210ENST00000548874 GGTLC2Q14390 218 aa18.36■□□□□ 0.53
CACNB3-210ENST00000548874 DAZAP2Q15038 168 aaPredicted RBP18.36■□□□□ 0.53
CACNB3-210ENST00000548874 HIST2H3PS2Q5TEC6 136 aa18.36■□□□□ 0.53
CACNB3-210ENST00000548874 HIST2H3AQ71DI3 136 aa18.36■□□□□ 0.53
CACNB3-210ENST00000548874 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.36■□□□□ 0.53
CACNB3-210ENST00000548874 C1QTNF6Q9BXI9 259 aa18.36■□□□□ 0.53
CACNB3-210ENST00000548874 CCNB1IP1Q9NPC3 277 aa18.36■□□□□ 0.53
CACNB3-210ENST00000548874 ASH2LQ9UBL3 628 aa18.36■□□□□ 0.53
CACNB3-210ENST00000548874 WARS2Q9UGM6 360 aaKnown RBP18.36■□□□□ 0.53
CACNB3-210ENST00000548874 CYB5R1Q9UHQ9 305 aa18.36■□□□□ 0.53
CACNB3-210ENST00000548874 TIMM10BQ9Y5J6 103 aa18.36■□□□□ 0.53
CACNB3-210ENST00000548874 CASKO14936 926 aa18.35■□□□□ 0.53
CACNB3-210ENST00000548874 SIAH2O43255 324 aa18.35■□□□□ 0.53
CACNB3-210ENST00000548874 ENTPD1P49961 510 aa18.35■□□□□ 0.53
CACNB3-210ENST00000548874 ZNF83P51522 516 aa18.35■□□□□ 0.53
CACNB3-210ENST00000548874 PSG4Q00888 419 aa18.35■□□□□ 0.53
CACNB3-210ENST00000548874 TMED1Q13445 227 aa18.35■□□□□ 0.53
CACNB3-210ENST00000548874 ALKBH2Q6NS38 261 aa18.35■□□□□ 0.53
CACNB3-210ENST00000548874 SLC18B1Q6NT16 456 aa18.35■□□□□ 0.53
CACNB3-210ENST00000548874 TMEM53Q6P2H8 277 aa18.35■□□□□ 0.53
CACNB3-210ENST00000548874 C8orf59Q8N0T1 100 aaPredicted RBP18.35■□□□□ 0.53
CACNB3-210ENST00000548874 RFKQ969G6 155 aa18.35■□□□□ 0.53
CACNB3-210ENST00000548874 INTS14Q96SY0 518 aa18.35■□□□□ 0.53
CACNB3-210ENST00000548874 OR2H1Q9GZK4 316 aa18.35■□□□□ 0.53
CACNB3-210ENST00000548874 RNF121Q9H920 327 aa18.35■□□□□ 0.53
CACNB3-210ENST00000548874 NGBQ9NPG2 151 aa18.35■□□□□ 0.53
CACNB3-210ENST00000548874 POLR1DQ9Y2S0 133 aa18.35■□□□□ 0.53
CACNB3-210ENST00000548874 DEFB108AA8MXU0 73 aa18.34■□□□□ 0.53
CACNB3-210ENST00000548874 SELENOFO60613 162 aa18.34■□□□□ 0.53
CACNB3-210ENST00000548874 WBP4O75554 376 aaKnown RBP18.34■□□□□ 0.53
CACNB3-210ENST00000548874 RAB36O95755 333 aa18.34■□□□□ 0.53
CACNB3-210ENST00000548874 COX6B1P14854 86 aa18.34■□□□□ 0.53
CACNB3-210ENST00000548874 ZNF14P17017 642 aaPredicted RBP18.34■□□□□ 0.53
CACNB3-210ENST00000548874 COL8A1P27658 744 aa18.34■□□□□ 0.53
CACNB3-210ENST00000548874 SCRN3Q0VDG4 424 aa18.34■□□□□ 0.53
CACNB3-210ENST00000548874 PABPC1L2AQ5JQF8 200 aa18.34■□□□□ 0.53
CACNB3-210ENST00000548874 MYPOPQ86VE0 399 aaPredicted RBP18.34■□□□□ 0.53
CACNB3-210ENST00000548874 ERI1Q8IV48 349 aaKnown RBP18.34■□□□□ 0.53
CACNB3-210ENST00000548874 ZNF584Q8IVC4 421 aa18.34■□□□□ 0.53
CACNB3-210ENST00000548874 FBLIM1Q8WUP2 373 aa18.34■□□□□ 0.53
CACNB3-210ENST00000548874 ZNF184Q99676 751 aaPredicted RBP18.34■□□□□ 0.53
CACNB3-210ENST00000548874 ANKRD60Q9BZ19 345 aa18.34■□□□□ 0.53
CACNB3-210ENST00000548874 WNT5BQ9H1J7 359 aa18.34■□□□□ 0.53
CACNB3-210ENST00000548874 CLN6Q9NWW5 311 aa18.34■□□□□ 0.53
CACNB3-210ENST00000548874 FBXL3Q9UKT7 428 aa18.34■□□□□ 0.53
CACNB3-210ENST00000548874 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.34■□□□□ 0.53
CACNB3-210ENST00000548874 IGHV1-18A0A0C4DH31 117 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms