RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 NOXO1Q8NFA2 376 aa1.55□□□□□ -2.16
CCDC38-206ENST00000548771 OR8J1Q8NGP2 316 aa1.55□□□□□ -2.16
CCDC38-206ENST00000548771 COQ8AQ8NI60 647 aa1.55□□□□□ -2.16
CCDC38-206ENST00000548771 RNF139Q8WU17 664 aa1.55□□□□□ -2.16
CCDC38-206ENST00000548771 RSPH1Q8WYR4 309 aa1.55□□□□□ -2.16
CCDC38-206ENST00000548771 NEURL3Q96EH8 262 aa1.55□□□□□ -2.16
CCDC38-206ENST00000548771 NARS2Q96I59 477 aaKnown RBP1.55□□□□□ -2.16
CCDC38-206ENST00000548771 ZNF681Q96N22 645 aa1.55□□□□□ -2.16
CCDC38-206ENST00000548771 SERPINB12Q96P63 405 aa1.55□□□□□ -2.16
CCDC38-206ENST00000548771 CAMK2N2Q96S95 79 aa1.55□□□□□ -2.16
CCDC38-206ENST00000548771 DOK1Q99704 481 aa1.55□□□□□ -2.16
CCDC38-206ENST00000548771 ING4Q9UNL4 249 aa1.55□□□□□ -2.16
CCDC38-206ENST00000548771 IKBKGQ9Y6K9 419 aa1.55□□□□□ -2.16
CCDC38-206ENST00000548771 CNTNAP1P78357 1384 aa1.55□□□□□ -2.16
CCDC38-206ENST00000548771 KANK1Q14678 1352 aa1.55□□□□□ -2.16
CCDC38-206ENST00000548771 ZNF816-ZNF321PA0A0X1KG74 233 aa1.54□□□□□ -2.16
CCDC38-206ENST00000548771 A0A1W2PPE3 182 aa1.54□□□□□ -2.16
CCDC38-206ENST00000548771 CDC7O00311 574 aa1.54□□□□□ -2.16
CCDC38-206ENST00000548771 DPM1O60762 260 aa1.54□□□□□ -2.16
CCDC38-206ENST00000548771 CCNKO75909 580 aa1.54□□□□□ -2.16
CCDC38-206ENST00000548771 CLIC3O95833 236 aa1.54□□□□□ -2.16
CCDC38-206ENST00000548771 ZNF806P0C7X5 589 aa1.54□□□□□ -2.16
CCDC38-206ENST00000548771 MCF2P10911 925 aa1.54□□□□□ -2.16
CCDC38-206ENST00000548771 CCNB1P14635 433 aa1.54□□□□□ -2.16
CCDC38-206ENST00000548771 MX1P20591 662 aa1.54□□□□□ -2.16
CCDC38-206ENST00000548771 KITLGP21583 273 aa1.54□□□□□ -2.16
CCDC38-206ENST00000548771 CASP14P31944 242 aa1.54□□□□□ -2.16
CCDC38-206ENST00000548771 AQP2P41181 271 aa1.54□□□□□ -2.16
CCDC38-206ENST00000548771 KIR3DL2P43630 455 aa1.54□□□□□ -2.16
CCDC38-206ENST00000548771 ACTR1AP61163 376 aa1.54□□□□□ -2.16
CCDC38-206ENST00000548771 IFT88Q13099 833 aa1.54□□□□□ -2.16
CCDC38-206ENST00000548771 ANKRD26P1Q6NSI1 321 aa1.54□□□□□ -2.16
CCDC38-206ENST00000548771 PLET1Q6UQ28 207 aa1.54□□□□□ -2.16
CCDC38-206ENST00000548771 RUFY3Q7L099 469 aa1.54□□□□□ -2.16
CCDC38-206ENST00000548771 BHLHA15Q7RTS1 189 aaPredicted RBP1.54□□□□□ -2.16
CCDC38-206ENST00000548771 EGFL6Q8IUX8 553 aa1.54□□□□□ -2.16
CCDC38-206ENST00000548771 ZCCHC7Q8N3Z6 543 aaKnown RBP1.54□□□□□ -2.16
CCDC38-206ENST00000548771 PLPPR1Q8TBJ4 325 aa1.54□□□□□ -2.16
CCDC38-206ENST00000548771 NTAN1Q96AB6 310 aa1.54□□□□□ -2.16
CCDC38-206ENST00000548771 ZBTB18Q99592 522 aa1.54□□□□□ -2.16
CCDC38-206ENST00000548771 SULT4A1Q9BR01 284 aa1.54□□□□□ -2.16
CCDC38-206ENST00000548771 UBE2ZQ9H832 354 aaPredicted RBP1.54□□□□□ -2.16
CCDC38-206ENST00000548771 DDX19AQ9NUU7 478 aaKnown RBP1.54□□□□□ -2.16
CCDC38-206ENST00000548771 ETNK2Q9NVF9 386 aa1.54□□□□□ -2.16
CCDC38-206ENST00000548771 KLHL28Q9NXS3 571 aa1.54□□□□□ -2.16
CCDC38-206ENST00000548771 TRMT112Q9UI30 125 aaKnown RBP1.54□□□□□ -2.16
CCDC38-206ENST00000548771 LSM7Q9UK45 103 aaKnown RBP1.54□□□□□ -2.16
CCDC38-206ENST00000548771 NUP50Q9UKX7 468 aa1.54□□□□□ -2.16
CCDC38-206ENST00000548771 GOLT1BQ9Y3E0 138 aa1.54□□□□□ -2.16
CCDC38-206ENST00000548771 ANKRD12Q6UB98 2062 aa1.54□□□□□ -2.16
CCDC38-206ENST00000548771 FAM240BA0A1B0GVZ2 78 aa1.53□□□□□ -2.16
CCDC38-206ENST00000548771 ZNF850A8MQ14 1090 aa1.53□□□□□ -2.16
CCDC38-206ENST00000548771 APCSP02743 223 aa1.53□□□□□ -2.16
CCDC38-206ENST00000548771 NCF2P19878 526 aaPredicted RBP1.53□□□□□ -2.16
CCDC38-206ENST00000548771 CEACAM3P40198 252 aa1.53□□□□□ -2.16
CCDC38-206ENST00000548771 CRYBB2P43320 205 aa1.53□□□□□ -2.16
CCDC38-206ENST00000548771 SLC11A1P49279 550 aa1.53□□□□□ -2.16
CCDC38-206ENST00000548771 SSR4P51571 173 aa1.53□□□□□ -2.16
CCDC38-206ENST00000548771 ARFIP1P53367 373 aa1.53□□□□□ -2.16
CCDC38-206ENST00000548771 MXD1Q05195 221 aa1.53□□□□□ -2.16
CCDC38-206ENST00000548771 CDC20Q12834 499 aa1.53□□□□□ -2.16
CCDC38-206ENST00000548771 SRSF5Q13243 272 aaKnown RBP1.53□□□□□ -2.16
CCDC38-206ENST00000548771 PON2Q15165 354 aa1.53□□□□□ -2.16
CCDC38-206ENST00000548771 ZMYND11Q15326 602 aa1.53□□□□□ -2.16
CCDC38-206ENST00000548771 METTL21CQ5VZV1 264 aa1.53□□□□□ -2.16
CCDC38-206ENST00000548771 SAXO2Q658L1 398 aa1.53□□□□□ -2.16
CCDC38-206ENST00000548771 CENPPQ6IPU0 288 aa1.53□□□□□ -2.16
CCDC38-206ENST00000548771 UBE2J2Q8N2K1 259 aa1.53□□□□□ -2.16
CCDC38-206ENST00000548771 LIX1Q8N485 282 aa1.53□□□□□ -2.16
CCDC38-206ENST00000548771 MS4A15Q8N5U1 240 aa1.53□□□□□ -2.16
CCDC38-206ENST00000548771 OR1S2Q8NGQ3 325 aa1.53□□□□□ -2.16
CCDC38-206ENST00000548771 OR10J6PQ8NGY7 276 aa1.53□□□□□ -2.16
CCDC38-206ENST00000548771 OR8U1Q8NH10 309 aa1.53□□□□□ -2.16
CCDC38-206ENST00000548771 SLC7A13Q8TCU3 470 aa1.53□□□□□ -2.16
CCDC38-206ENST00000548771 C15orf40Q8WUR7 153 aa1.53□□□□□ -2.16
CCDC38-206ENST00000548771 FLYWCH2Q96CP2 140 aaKnown RBP1.53□□□□□ -2.16
CCDC38-206ENST00000548771 RNF5Q99942 180 aa1.53□□□□□ -2.16
CCDC38-206ENST00000548771 CRACR2AQ9BSW2 395 aa1.53□□□□□ -2.16
CCDC38-206ENST00000548771 GCOM2Q9BZD3 368 aaPredicted RBP1.53□□□□□ -2.16
CCDC38-206ENST00000548771 SAV1Q9H4B6 383 aaPredicted RBP1.53□□□□□ -2.16
CCDC38-206ENST00000548771 CWH43Q9H720 699 aa1.53□□□□□ -2.16
CCDC38-206ENST00000548771 ZNF586Q9NXT0 402 aa1.53□□□□□ -2.16
CCDC38-206ENST00000548771 PTPRTO14522 1441 aa1.52□□□□□ -2.17
CCDC38-206ENST00000548771 GLYATL1P3A0A0U1RQE8 302 aa1.52□□□□□ -2.17
CCDC38-206ENST00000548771 CPLX1O14810 134 aa1.52□□□□□ -2.17
CCDC38-206ENST00000548771 ZNF207O43670 478 aaKnown RBP1.52□□□□□ -2.17
CCDC38-206ENST00000548771 GCM2O75603 506 aaPredicted RBP1.52□□□□□ -2.17
CCDC38-206ENST00000548771 CDRT1O95170 752 aa1.52□□□□□ -2.17
CCDC38-206ENST00000548771 TNNI1P19237 187 aa1.52□□□□□ -2.17
CCDC38-206ENST00000548771 WARSP23381 471 aaKnown RBP1.52□□□□□ -2.17
CCDC38-206ENST00000548771 F2RP25116 425 aa1.52□□□□□ -2.17
CCDC38-206ENST00000548771 CHMLP26374 656 aa1.52□□□□□ -2.17
CCDC38-206ENST00000548771 HNRNPH3P31942 346 aaKnown RBP1.52□□□□□ -2.17
CCDC38-206ENST00000548771 SSTR5P35346 364 aa1.52□□□□□ -2.17
CCDC38-206ENST00000548771 OPRK1P41145 380 aa1.52□□□□□ -2.17
CCDC38-206ENST00000548771 CCNHP51946 323 aaPredicted RBP1.52□□□□□ -2.17
CCDC38-206ENST00000548771 PLP1P60201 277 aa1.52□□□□□ -2.17
CCDC38-206ENST00000548771 UBE2NP61088 152 aaKnown RBP1.52□□□□□ -2.17
CCDC38-206ENST00000548771 RPL23AP62750 156 aaKnown RBP1.52□□□□□ -2.17
CCDC38-206ENST00000548771 ZNF816Q0VGE8 651 aaPredicted RBP1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms