RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 TMEM159Q96B96 161 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 C16orf74Q96GX8 76 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 TPD52L3Q96J77 140 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 PGLYRP4Q96LB8 373 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 TECTBQ96PL2 329 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 NPY6RQ99463 290 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 MAPKAP1Q9BPZ7 522 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 CCDC77Q9BR77 488 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 CNPY3Q9BT09 278 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 BLZF1Q9H2G9 400 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 ZDHHC11Q9H8X9 412 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 CISHQ9NSE2 258 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 RAB20Q9NX57 234 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 HMGXB4Q9UGU5 601 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 KIAA1257Q9ULG3 409 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 CLEC4AQ9UMR7 237 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 PRPF19Q9UMS4 504 aaKnown RBP2.86□□□□□ -1.95
PTCH1-216ENST00000548379 ATRXP46100 2492 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 FRYLO94915 3013 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 CEP250Q9BV73 2442 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 CHD6Q8TD26 2715 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 SPEGQ15772 3267 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 C2orf16Q68DN1 1984 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 CACNA1GO43497 2377 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 IGKV1D-8A0A087WSZ0 117 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 A0A1B0GUS0 222 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 GOLGA6L7A0A1B0GV03 622 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 KLLNB2CW77 178 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 M0QYV0 167 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 DCTN6O00399 190 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 HDAC3O15379 428 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 POLR2DO15514 142 aaKnown RBP2.85□□□□□ -1.95
PTCH1-216ENST00000548379 AQP9O43315 295 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 MED7O43513 233 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 AP2A1O95782 977 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 LIPCP11150 499 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 CTSEP14091 401 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 CD82P27701 267 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 GCAP28676 217 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 CEBPDP49716 269 aaPredicted RBP2.85□□□□□ -1.95
PTCH1-216ENST00000548379 HLCSP50747 726 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 BIDP55957 195 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 DAOAP59103 153 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 ACTR3P61158 418 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 RPS21P63220 83 aaKnown RBP2.85□□□□□ -1.95
PTCH1-216ENST00000548379 ENPEPQ07075 957 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 DEFB133Q30KQ1 61 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 CCDC14Q49A88 953 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 C11orf71Q6IPW1 123 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 IL34Q6ZMJ4 242 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 Q6ZSR6 202 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 FAM220AQ7Z4H9 259 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 HORMAD1Q86X24 394 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 CCDC50Q8IVM0 306 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 CCDC71LQ8N9Z2 235 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 BHLHE23Q8NDY6 225 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 CCDC112Q8NEF3 446 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 OR6C4Q8NGE1 309 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 OR8J1Q8NGP2 316 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 UBA3Q8TBC4 463 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 UBE2E3Q969T4 207 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 NT5C3BQ969T7 300 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 BTN2A3PQ96KV6 586 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 RPRD1AQ96P16 312 aaPredicted RBP2.85□□□□□ -1.95
PTCH1-216ENST00000548379 SLC38A2Q96QD8 506 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 TSG101Q99816 390 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 NICN1Q9BSH3 213 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 PTGES2Q9H7Z7 377 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 YY1AP1Q9H869 796 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 FN3KRPQ9HA64 309 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 ASCL3Q9NQ33 180 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 IL17CQ9P0M4 197 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 TRAF3IP3Q9Y228 551 aa2.85□□□□□ -1.95
PTCH1-216ENST00000548379 BAZ2BQ9UIF8 2168 aaKnown RBP2.84□□□□□ -1.95
PTCH1-216ENST00000548379 BAHCC1Q9P281 2608 aa2.84□□□□□ -1.95
PTCH1-216ENST00000548379 SPTY2D1-AS1A0A0U1RR47 76 aa2.84□□□□□ -1.95
PTCH1-216ENST00000548379 FAM231BA6NCW3 169 aa2.84□□□□□ -1.95
PTCH1-216ENST00000548379 SNTNA6NMZ2 147 aa2.84□□□□□ -1.95
PTCH1-216ENST00000548379 A8MU10 97 aa2.84□□□□□ -1.95
PTCH1-216ENST00000548379 CASQ2O14958 399 aaPredicted RBP2.84□□□□□ -1.95
PTCH1-216ENST00000548379 CETN3O15182 167 aa2.84□□□□□ -1.95
PTCH1-216ENST00000548379 NVLO15381 856 aaKnown RBP2.84□□□□□ -1.95
PTCH1-216ENST00000548379 ZNF264O43296 627 aa2.84□□□□□ -1.95
PTCH1-216ENST00000548379 ZNF208O43345 1280 aa2.84□□□□□ -1.95
PTCH1-216ENST00000548379 FCMRO60667 390 aa2.84□□□□□ -1.95
PTCH1-216ENST00000548379 B4GALT2O60909 372 aa2.84□□□□□ -1.95
PTCH1-216ENST00000548379 ERLIN1O75477 346 aa2.84□□□□□ -1.95
PTCH1-216ENST00000548379 CLDN11O75508 207 aa2.84□□□□□ -1.95
PTCH1-216ENST00000548379 YEATS4O95619 227 aa2.84□□□□□ -1.95
PTCH1-216ENST00000548379 IGLV3-27P01718 113 aa2.84□□□□□ -1.95
PTCH1-216ENST00000548379 PAEPP09466 180 aa2.84□□□□□ -1.95
PTCH1-216ENST00000548379 HSMCR30P0CW71 290 aa2.84□□□□□ -1.95
PTCH1-216ENST00000548379 NCK1P16333 377 aa2.84□□□□□ -1.95
PTCH1-216ENST00000548379 ZNF19P17023 458 aa2.84□□□□□ -1.95
PTCH1-216ENST00000548379 SYT1P21579 422 aa2.84□□□□□ -1.95
PTCH1-216ENST00000548379 ZBTB25P24278 435 aa2.84□□□□□ -1.95
PTCH1-216ENST00000548379 CCR1P32246 355 aa2.84□□□□□ -1.95
PTCH1-216ENST00000548379 DRD3P35462 400 aa2.84□□□□□ -1.95
PTCH1-216ENST00000548379 DDOSTP39656 456 aa2.84□□□□□ -1.95
PTCH1-216ENST00000548379 RPL13AP40429 203 aaKnown RBP2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms