RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 MS4A3Q96HJ5 214 aa12.54□□□□□ -0.4
DDX54-203ENST00000546869 OR2H1Q9GZK4 316 aa12.54□□□□□ -0.4
DDX54-203ENST00000546869 UBTD1Q9HAC8 227 aa12.54□□□□□ -0.4
DDX54-203ENST00000546869 POU2F3Q9UKI9 436 aa12.54□□□□□ -0.4
DDX54-203ENST00000546869 SPEF1Q9Y4P9 236 aa12.54□□□□□ -0.4
DDX54-203ENST00000546869 SPG11Q96JI7 2443 aa12.53□□□□□ -0.4
DDX54-203ENST00000546869 ICMTO60725 284 aa12.53□□□□□ -0.4
DDX54-203ENST00000546869 TFP02787 698 aa12.53□□□□□ -0.4
DDX54-203ENST00000546869 ALPLP05186 524 aa12.53□□□□□ -0.4
DDX54-203ENST00000546869 PAX1P15863 534 aa12.53□□□□□ -0.4
DDX54-203ENST00000546869 IGFBP5P24593 272 aa12.53□□□□□ -0.4
DDX54-203ENST00000546869 PCSK6P29122 969 aa12.53□□□□□ -0.4
DDX54-203ENST00000546869 TTKP33981 857 aa12.53□□□□□ -0.4
DDX54-203ENST00000546869 NKX6-1P78426 367 aaPredicted RBP12.53□□□□□ -0.4
DDX54-203ENST00000546869 EFNB1P98172 346 aa12.53□□□□□ -0.4
DDX54-203ENST00000546869 TEKQ02763 1124 aa12.53□□□□□ -0.4
DDX54-203ENST00000546869 HGFACQ04756 655 aa12.53□□□□□ -0.4
DDX54-203ENST00000546869 SCRN3Q0VDG4 424 aa12.53□□□□□ -0.4
DDX54-203ENST00000546869 UGT2A3Q6UWM9 527 aa12.53□□□□□ -0.4
DDX54-203ENST00000546869 IQCF1Q8N6M8 205 aa12.53□□□□□ -0.4
DDX54-203ENST00000546869 CYB561A3Q8NBI2 242 aa12.53□□□□□ -0.4
DDX54-203ENST00000546869 ICA1LQ8NDH6 482 aa12.53□□□□□ -0.4
DDX54-203ENST00000546869 CPEB3Q8NE35 698 aaKnown RBP12.53□□□□□ -0.4
DDX54-203ENST00000546869 SLC30A7Q8NEW0 376 aa12.53□□□□□ -0.4
DDX54-203ENST00000546869 NEUROG1Q92886 237 aa12.53□□□□□ -0.4
DDX54-203ENST00000546869 STMN2Q93045 179 aa12.53□□□□□ -0.4
DDX54-203ENST00000546869 POM121L2Q96KW2 1035 aa12.53□□□□□ -0.4
DDX54-203ENST00000546869 GABARAPL3Q9BY60 117 aa12.53□□□□□ -0.4
DDX54-203ENST00000546869 PRRG3Q9BZD7 231 aa12.53□□□□□ -0.4
DDX54-203ENST00000546869 WNT5BQ9H1J7 359 aa12.53□□□□□ -0.4
DDX54-203ENST00000546869 FN3KQ9H479 309 aa12.53□□□□□ -0.4
DDX54-203ENST00000546869 RERGLQ9H628 205 aa12.53□□□□□ -0.4
DDX54-203ENST00000546869 ZNF442Q9H7R0 627 aa12.53□□□□□ -0.4
DDX54-203ENST00000546869 EMC7Q9NPA0 242 aa12.53□□□□□ -0.4
DDX54-203ENST00000546869 BEX4Q9NWD9 120 aaPredicted RBP12.53□□□□□ -0.4
DDX54-203ENST00000546869 ATPIF1Q9UII2 106 aa12.53□□□□□ -0.4
DDX54-203ENST00000546869 ATP23Q9Y6H3 246 aa12.53□□□□□ -0.4
DDX54-203ENST00000546869 RAI1Q7Z5J4 1906 aaPredicted RBP12.52□□□□□ -0.4
DDX54-203ENST00000546869 CADP27708 2225 aa12.52□□□□□ -0.41
DDX54-203ENST00000546869 SAC3D1A6NKF1 404 aa12.52□□□□□ -0.41
DDX54-203ENST00000546869 ZAR1LA6NP61 321 aa12.52□□□□□ -0.41
DDX54-203ENST00000546869 VSTM5A8MXK1 200 aa12.52□□□□□ -0.41
DDX54-203ENST00000546869 MITFO75030 526 aaPredicted RBP12.52□□□□□ -0.41
DDX54-203ENST00000546869 MPZL1O95297 269 aa12.52□□□□□ -0.41
DDX54-203ENST00000546869 SPI1P17947 270 aa12.52□□□□□ -0.41
DDX54-203ENST00000546869 PAICSP22234 425 aaKnown RBP12.52□□□□□ -0.41
DDX54-203ENST00000546869 STOMP27105 288 aa12.52□□□□□ -0.41
DDX54-203ENST00000546869 ALDH3A2P51648 485 aa12.52□□□□□ -0.41
DDX54-203ENST00000546869 PCK2Q16822 640 aa12.52□□□□□ -0.41
DDX54-203ENST00000546869 TBC1D28Q2M2D7 210 aa12.52□□□□□ -0.41
DDX54-203ENST00000546869 TEX30Q5JUR7 227 aa12.52□□□□□ -0.41
DDX54-203ENST00000546869 AGAP6Q5VW22 663 aa12.52□□□□□ -0.41
DDX54-203ENST00000546869 SLX4IPQ5VYV7 408 aa12.52□□□□□ -0.41
DDX54-203ENST00000546869 B3GLCTQ6Y288 498 aa12.52□□□□□ -0.41
DDX54-203ENST00000546869 C1orf174Q8IYL3 243 aa12.52□□□□□ -0.41
DDX54-203ENST00000546869 PROKR2Q8NFJ6 384 aa12.52□□□□□ -0.41
DDX54-203ENST00000546869 GJC3Q8NFK1 279 aa12.52□□□□□ -0.41
DDX54-203ENST00000546869 CIB1Q99828 191 aa12.52□□□□□ -0.41
DDX54-203ENST00000546869 FOXC2Q99958 501 aa12.52□□□□□ -0.41
DDX54-203ENST00000546869 C9orf16Q9BUW7 83 aa12.52□□□□□ -0.41
DDX54-203ENST00000546869 CA10Q9NS85 328 aa12.52□□□□□ -0.41
DDX54-203ENST00000546869 CYB5R1Q9UHQ9 305 aa12.52□□□□□ -0.41
DDX54-203ENST00000546869 NDRG4Q9ULP0 352 aaKnown RBP12.52□□□□□ -0.41
DDX54-203ENST00000546869 NAV2Q8IVL1 2488 aa12.52□□□□□ -0.41
DDX54-203ENST00000546869 POLQO75417 2590 aa12.51□□□□□ -0.41
DDX54-203ENST00000546869 PRR23D1E9PI22 279 aaPredicted RBP12.51□□□□□ -0.41
DDX54-203ENST00000546869 OVOL3O00110 214 aa12.51□□□□□ -0.41
DDX54-203ENST00000546869 PRODHO43272 600 aa12.51□□□□□ -0.41
DDX54-203ENST00000546869 CD8AP01732 235 aa12.51□□□□□ -0.41
DDX54-203ENST00000546869 PRR23D2P0DMB1 279 aaPredicted RBP12.51□□□□□ -0.41
DDX54-203ENST00000546869 FMO3P31513 532 aa12.51□□□□□ -0.41
DDX54-203ENST00000546869 APLNRP35414 380 aa12.51□□□□□ -0.41
DDX54-203ENST00000546869 GLRXP35754 106 aa12.51□□□□□ -0.41
DDX54-203ENST00000546869 GGT2P36268 569 aa12.51□□□□□ -0.41
DDX54-203ENST00000546869 DAG1Q14118 895 aa12.51□□□□□ -0.41
DDX54-203ENST00000546869 DEFB113Q30KQ7 82 aa12.51□□□□□ -0.41
DDX54-203ENST00000546869 LINC01590Q5TEZ4 76 aa12.51□□□□□ -0.41
DDX54-203ENST00000546869 TMEM236Q5W0B7 351 aa12.51□□□□□ -0.41
DDX54-203ENST00000546869 C12orf73Q69YU5 71 aa12.51□□□□□ -0.41
DDX54-203ENST00000546869 LRRC75A-AS1Q8N1F1 130 aa12.51□□□□□ -0.41
DDX54-203ENST00000546869 MUC15Q8N387 334 aa12.51□□□□□ -0.41
DDX54-203ENST00000546869 OR10H5Q8NGA6 315 aa12.51□□□□□ -0.41
DDX54-203ENST00000546869 TMEM171Q8WVE6 324 aa12.51□□□□□ -0.41
DDX54-203ENST00000546869 ZNRF4Q8WWF5 429 aa12.51□□□□□ -0.41
DDX54-203ENST00000546869 IPCEF1Q8WWN9 437 aaPredicted RBP12.51□□□□□ -0.41
DDX54-203ENST00000546869 FOXN4Q96NZ1 517 aa12.51□□□□□ -0.41
DDX54-203ENST00000546869 CCL19Q99731 98 aa12.51□□□□□ -0.41
DDX54-203ENST00000546869 TRAF4Q9BUZ4 470 aaPredicted RBP12.51□□□□□ -0.41
DDX54-203ENST00000546869 CXXC4Q9H2H0 198 aa12.51□□□□□ -0.41
DDX54-203ENST00000546869 MARCH7Q9H992 704 aa12.51□□□□□ -0.41
DDX54-203ENST00000546869 CBLN4Q9NTU7 201 aa12.51□□□□□ -0.41
DDX54-203ENST00000546869 MRPL22Q9NWU5 206 aaKnown RBP12.51□□□□□ -0.41
DDX54-203ENST00000546869 ASH2LQ9UBL3 628 aa12.51□□□□□ -0.41
DDX54-203ENST00000546869 FBXO9Q9UK97 447 aaPredicted RBP12.51□□□□□ -0.41
DDX54-203ENST00000546869 PLEKHA6Q9Y2H5 1048 aa12.51□□□□□ -0.41
DDX54-203ENST00000546869 LHFPL6Q9Y693 200 aa12.51□□□□□ -0.41
DDX54-203ENST00000546869 LOC100509620A0A075B734 347 aa12.5□□□□□ -0.41
DDX54-203ENST00000546869 OR6C6A6NF89 314 aa12.5□□□□□ -0.41
DDX54-203ENST00000546869 E9PQ18 207 aa12.5□□□□□ -0.41
DDX54-203ENST00000546869 SGCEO43556 437 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms