RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 DANCRP0C864 163 aa14.56□□□□□ -0.08
CCDC38-203ENST00000546803 APOBEC3AP31941 199 aaPredicted RBP14.56□□□□□ -0.08
CCDC38-203ENST00000546803 PYCR1P32322 319 aa14.56□□□□□ -0.08
CCDC38-203ENST00000546803 APLNRP35414 380 aa14.56□□□□□ -0.08
CCDC38-203ENST00000546803 TEKQ02763 1124 aa14.56□□□□□ -0.08
CCDC38-203ENST00000546803 HGFACQ04756 655 aa14.56□□□□□ -0.08
CCDC38-203ENST00000546803 PTGES3Q15185 160 aaKnown RBP14.56□□□□□ -0.08
CCDC38-203ENST00000546803 TBC1D28Q2M2D7 210 aa14.56□□□□□ -0.08
CCDC38-203ENST00000546803 AGAP6Q5VW22 663 aa14.56□□□□□ -0.08
CCDC38-203ENST00000546803 TMEM236Q5W0B7 351 aa14.56□□□□□ -0.08
CCDC38-203ENST00000546803 OR10H5Q8NGA6 315 aa14.56□□□□□ -0.08
CCDC38-203ENST00000546803 PLEKHA8Q96JA3 519 aa14.56□□□□□ -0.08
CCDC38-203ENST00000546803 CCL19Q99731 98 aa14.56□□□□□ -0.08
CCDC38-203ENST00000546803 C9orf16Q9BUW7 83 aa14.56□□□□□ -0.08
CCDC38-203ENST00000546803 GRIP2Q9C0E4 1043 aa14.56□□□□□ -0.08
CCDC38-203ENST00000546803 WNT5BQ9H1J7 359 aa14.56□□□□□ -0.08
CCDC38-203ENST00000546803 CA10Q9NS85 328 aa14.56□□□□□ -0.08
CCDC38-203ENST00000546803 USE1Q9NZ43 259 aa14.56□□□□□ -0.08
CCDC38-203ENST00000546803 POLR1DQ9Y2S0 133 aa14.56□□□□□ -0.08
CCDC38-203ENST00000546803 FAM171A2A8MVW0 826 aa14.55□□□□□ -0.08
CCDC38-203ENST00000546803 ANKRD65E5RJM6 399 aa14.55□□□□□ -0.08
CCDC38-203ENST00000546803 BAG2O95816 211 aa14.55□□□□□ -0.08
CCDC38-203ENST00000546803 TFP02787 698 aa14.55□□□□□ -0.08
CCDC38-203ENST00000546803 COX5BP10606 129 aa14.55□□□□□ -0.08
CCDC38-203ENST00000546803 ZNF823P16415 610 aa14.55□□□□□ -0.08
CCDC38-203ENST00000546803 SPI1P17947 270 aa14.55□□□□□ -0.08
CCDC38-203ENST00000546803 NR4A1P22736 598 aa14.55□□□□□ -0.08
CCDC38-203ENST00000546803 STOMP27105 288 aa14.55□□□□□ -0.08
CCDC38-203ENST00000546803 TTKP33981 857 aa14.55□□□□□ -0.08
CCDC38-203ENST00000546803 FABP6P51161 128 aa14.55□□□□□ -0.08
CCDC38-203ENST00000546803 GALK2Q01415 458 aa14.55□□□□□ -0.08
CCDC38-203ENST00000546803 DAG1Q14118 895 aa14.55□□□□□ -0.08
CCDC38-203ENST00000546803 DTX2Q86UW9 622 aa14.55□□□□□ -0.08
CCDC38-203ENST00000546803 FBXL14Q8N1E6 418 aa14.55□□□□□ -0.08
CCDC38-203ENST00000546803 CPEB3Q8NE35 698 aaKnown RBP14.55□□□□□ -0.08
CCDC38-203ENST00000546803 OR9Q1Q8NGQ5 310 aa14.55□□□□□ -0.08
CCDC38-203ENST00000546803 AKR7LQ8NHP1 331 aa14.55□□□□□ -0.08
CCDC38-203ENST00000546803 TMEM171Q8WVE6 324 aa14.55□□□□□ -0.08
CCDC38-203ENST00000546803 IGFBPL1Q8WX77 278 aa14.55□□□□□ -0.08
CCDC38-203ENST00000546803 GABARAPL3Q9BY60 117 aa14.55□□□□□ -0.08
CCDC38-203ENST00000546803 ZNF442Q9H7R0 627 aa14.55□□□□□ -0.08
CCDC38-203ENST00000546803 CDH20Q9HBT6 801 aa14.55□□□□□ -0.08
CCDC38-203ENST00000546803 BEX4Q9NWD9 120 aaPredicted RBP14.55□□□□□ -0.08
CCDC38-203ENST00000546803 TVP23BQ9NYZ1 205 aa14.55□□□□□ -0.08
CCDC38-203ENST00000546803 ASH2LQ9UBL3 628 aa14.55□□□□□ -0.08
CCDC38-203ENST00000546803 ORC6Q9Y5N6 252 aa14.55□□□□□ -0.08
CCDC38-203ENST00000546803 CACNA1DQ01668 2161 aa14.55□□□□□ -0.08
CCDC38-203ENST00000546803 ABCA4P78363 2273 aa14.54□□□□□ -0.08
CCDC38-203ENST00000546803 FBN2P35556 2912 aa14.54□□□□□ -0.08
CCDC38-203ENST00000546803 ERICH4A6NGS2 130 aa14.54□□□□□ -0.08
CCDC38-203ENST00000546803 ZAR1LA6NP61 321 aa14.54□□□□□ -0.08
CCDC38-203ENST00000546803 PRR23D1E9PI22 279 aaPredicted RBP14.54□□□□□ -0.08
CCDC38-203ENST00000546803 SGCEO43556 437 aa14.54□□□□□ -0.08
CCDC38-203ENST00000546803 GPANK1O95872 356 aa14.54□□□□□ -0.08
CCDC38-203ENST00000546803 ALPLP05186 524 aa14.54□□□□□ -0.08
CCDC38-203ENST00000546803 SOD3P08294 240 aa14.54□□□□□ -0.08
CCDC38-203ENST00000546803 PRR23D2P0DMB1 279 aaPredicted RBP14.54□□□□□ -0.08
CCDC38-203ENST00000546803 APEX1P27695 318 aaKnown RBP14.54□□□□□ -0.08
CCDC38-203ENST00000546803 PCSK6P29122 969 aa14.54□□□□□ -0.08
CCDC38-203ENST00000546803 FMO3P31513 532 aa14.54□□□□□ -0.08
CCDC38-203ENST00000546803 GDI2P50395 445 aaKnown RBP14.54□□□□□ -0.08
CCDC38-203ENST00000546803 ALDH3A2P51648 485 aa14.54□□□□□ -0.08
CCDC38-203ENST00000546803 RAD23AP54725 363 aa14.54□□□□□ -0.08
CCDC38-203ENST00000546803 NKX6-1P78426 367 aaPredicted RBP14.54□□□□□ -0.08
CCDC38-203ENST00000546803 SNAPC1Q16533 368 aa14.54□□□□□ -0.08
CCDC38-203ENST00000546803 MEP1BQ16820 701 aa14.54□□□□□ -0.08
CCDC38-203ENST00000546803 DEFB113Q30KQ7 82 aa14.54□□□□□ -0.08
CCDC38-203ENST00000546803 SLX4IPQ5VYV7 408 aa14.54□□□□□ -0.08
CCDC38-203ENST00000546803 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.54□□□□□ -0.08
CCDC38-203ENST00000546803 MUC15Q8N387 334 aa14.54□□□□□ -0.08
CCDC38-203ENST00000546803 GJC3Q8NFK1 279 aa14.54□□□□□ -0.08
CCDC38-203ENST00000546803 PTP4A1Q93096 173 aa14.54□□□□□ -0.08
CCDC38-203ENST00000546803 POM121L2Q96KW2 1035 aa14.54□□□□□ -0.08
CCDC38-203ENST00000546803 CDADC1Q9BWV3 514 aa14.54□□□□□ -0.08
CCDC38-203ENST00000546803 CXorf56Q9H5V9 222 aa14.54□□□□□ -0.08
CCDC38-203ENST00000546803 CBLN4Q9NTU7 201 aa14.54□□□□□ -0.08
CCDC38-203ENST00000546803 NDRG4Q9ULP0 352 aaKnown RBP14.54□□□□□ -0.08
CCDC38-203ENST00000546803 LAMP3Q9UQV4 416 aa14.54□□□□□ -0.08
CCDC38-203ENST00000546803 CELSR2Q9HCU4 2923 aa14.53□□□□□ -0.08
CCDC38-203ENST00000546803 PRR14LQ5THK1 2151 aa14.53□□□□□ -0.08
CCDC38-203ENST00000546803 FAM183AA6NL82 134 aa14.53□□□□□ -0.08
CCDC38-203ENST00000546803 EI24O14681 340 aa14.53□□□□□ -0.08
CCDC38-203ENST00000546803 DOK2O60496 412 aa14.53□□□□□ -0.08
CCDC38-203ENST00000546803 GLRXP35754 106 aa14.53□□□□□ -0.08
CCDC38-203ENST00000546803 GGT2P36268 569 aa14.53□□□□□ -0.08
CCDC38-203ENST00000546803 RPS23P62266 143 aaKnown RBP14.53□□□□□ -0.08
CCDC38-203ENST00000546803 HIST1H3AP68431 136 aa14.53□□□□□ -0.08
CCDC38-203ENST00000546803 DBPQ10586 325 aaPredicted RBP14.53□□□□□ -0.08
CCDC38-203ENST00000546803 SNTB2Q13425 540 aaKnown RBP14.53□□□□□ -0.08
CCDC38-203ENST00000546803 HIST2H3PS2Q5TEC6 136 aa14.53□□□□□ -0.08
CCDC38-203ENST00000546803 OTPQ5XKR4 325 aa14.53□□□□□ -0.08
CCDC38-203ENST00000546803 KRT80Q6KB66 452 aa14.53□□□□□ -0.08
CCDC38-203ENST00000546803 ZNF774Q6NX45 483 aa14.53□□□□□ -0.08
CCDC38-203ENST00000546803 PLBD1Q6P4A8 553 aa14.53□□□□□ -0.08
CCDC38-203ENST00000546803 UNQ6126/PRO20091Q6UXV3 157 aa14.53□□□□□ -0.08
CCDC38-203ENST00000546803 HIST2H3AQ71DI3 136 aa14.53□□□□□ -0.08
CCDC38-203ENST00000546803 CBR4Q8N4T8 237 aa14.53□□□□□ -0.08
CCDC38-203ENST00000546803 OR51L1Q8NGJ5 315 aa14.53□□□□□ -0.08
CCDC38-203ENST00000546803 OR6K6Q8NGW6 343 aa14.53□□□□□ -0.08
CCDC38-203ENST00000546803 OR2AJ1Q8NGZ0 328 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms