RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 C1orf162Q8NEQ5 155 aaPredicted RBP5.55□□□□□ -1.52
PRKDC-211ENST00000546304 SDR9C7Q8NEX9 313 aa5.55□□□□□ -1.52
PRKDC-211ENST00000546304 FNDC8Q8TC99 324 aa5.55□□□□□ -1.52
PRKDC-211ENST00000546304 TMEM54Q969K7 222 aa5.55□□□□□ -1.52
PRKDC-211ENST00000546304 NMD3Q96D46 503 aaKnown RBP5.55□□□□□ -1.52
PRKDC-211ENST00000546304 MRPL13Q9BYD1 178 aaKnown RBP5.55□□□□□ -1.52
PRKDC-211ENST00000546304 PRRG3Q9BZD7 231 aa5.55□□□□□ -1.52
PRKDC-211ENST00000546304 ACTR6Q9GZN1 396 aa5.55□□□□□ -1.52
PRKDC-211ENST00000546304 SYT4Q9H2B2 425 aa5.55□□□□□ -1.52
PRKDC-211ENST00000546304 RIBC2Q9H4K1 309 aa5.55□□□□□ -1.52
PRKDC-211ENST00000546304 SLC25A19Q9HC21 320 aa5.55□□□□□ -1.52
PRKDC-211ENST00000546304 CRLF2Q9HC73 371 aa5.55□□□□□ -1.52
PRKDC-211ENST00000546304 GPR35Q9HC97 309 aa5.55□□□□□ -1.52
PRKDC-211ENST00000546304 ELOVL5Q9NYP7 299 aa5.55□□□□□ -1.52
PRKDC-211ENST00000546304 ZNF346Q9UL40 294 aaKnown RBP5.55□□□□□ -1.52
PRKDC-211ENST00000546304 RRP15Q9Y3B9 282 aaKnown RBP5.55□□□□□ -1.52
PRKDC-211ENST00000546304 ORC6Q9Y5N6 252 aa5.55□□□□□ -1.52
PRKDC-211ENST00000546304 NOTCH2Q04721 2471 aa5.55□□□□□ -1.52
PRKDC-211ENST00000546304 RTTNQ86VV8 2226 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 IGKV1D-43A0A0B4J1Z2 117 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 CIB4A0PJX0 185 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 SLC22A23A1A5C7 686 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 OR5H1A6NKK0 313 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 ZAR1LA6NP61 321 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 ZNF99A8MXY4 864 aaPredicted RBP5.54□□□□□ -1.52
PRKDC-211ENST00000546304 IMPA2O14732 288 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 CASQ2O14958 399 aaPredicted RBP5.54□□□□□ -1.52
PRKDC-211ENST00000546304 DHHO43323 396 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 IDH3BO43837 385 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 AHCYL1O43865 530 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 RENP00797 406 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 IFNGP01579 166 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 QDPRP09417 244 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 B4GALT1P15291 398 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 CTLA4P16410 223 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 EPHA2P29317 976 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 PEX19P40855 299 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 ZNF84P51523 738 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 ZNF133P52736 654 aaPredicted RBP5.54□□□□□ -1.52
PRKDC-211ENST00000546304 CRISP1P54107 249 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 ESRRGP62508 458 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 MYBPC1Q00872 1141 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.54□□□□□ -1.52
PRKDC-211ENST00000546304 CRMP1Q14194 572 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 GINS1Q14691 196 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 TSC22D1Q15714 1073 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 STK11Q15831 433 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 HIST3H3Q16695 136 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 LRRC36Q1X8D7 754 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 PRR31Q5SQ13 230 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 C10orf128Q5T292 105 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 OGFRL1Q5TC84 451 aaPredicted RBP5.54□□□□□ -1.52
PRKDC-211ENST00000546304 DNM1P34Q6PK57 102 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 KLHL24Q6TFL4 600 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 ZBTB49Q6ZSB9 765 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 SPATC1Q76KD6 591 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 C17orf78Q8N4C9 275 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 ZNF433Q8N7K0 673 aaPredicted RBP5.54□□□□□ -1.52
PRKDC-211ENST00000546304 CYB561A3Q8NBI2 242 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 ACBD4Q8NC06 268 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 STEAP2Q8NFT2 490 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 OR52E2Q8NGJ4 325 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 OR1K1Q8NGR3 316 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 OR4K13Q8NH42 304 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 NSMAFQ92636 917 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 MCHR2Q969V1 340 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 S100PBPQ96BU1 408 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 SLC38A2Q96QD8 506 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 SNX18Q96RF0 628 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 NMNAT3Q96T66 252 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 FOXB1Q99853 325 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 SYT3Q9BQG1 590 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 MED18Q9BUE0 208 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 TEX12Q9BXU0 123 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 RACGAP1Q9H0H5 632 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 OR10A4Q9H209 315 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 VCXQ9H320 206 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 NELFAQ9H3P2 528 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 FN3KQ9H479 309 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 RPRD1BQ9NQG5 326 aaKnown RBP5.54□□□□□ -1.52
PRKDC-211ENST00000546304 C8orf4Q9NR00 106 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 CMC2Q9NRP2 79 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 TMEM38BQ9NVV0 291 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 VSX1Q9NZR4 365 aaPredicted RBP5.54□□□□□ -1.52
PRKDC-211ENST00000546304 NKX1-2Q9UD57 310 aaPredicted RBP5.54□□□□□ -1.52
PRKDC-211ENST00000546304 KLHL21Q9UJP4 597 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 GPR52Q9Y2T5 361 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 NAV2Q8IVL1 2488 aa5.54□□□□□ -1.52
PRKDC-211ENST00000546304 CSMD2Q7Z408 3487 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 IGLV1-36A0A0B4J1U3 117 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 A0A1W2PPL8 197 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 OR6C68A6NDL8 312 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 TUBAL3A6NHL2 446 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 M0R129 80 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 SURF4O15260 269 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 MGRN1O60291 552 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 ATP6V1G2O95670 118 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 HMGN1P05114 100 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 PPP3CBP16298 524 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 PAICSP22234 425 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms