RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 CXADRP78310 365 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 PDGFRLQ15198 375 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 MEP1BQ16820 701 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 EEF1A1P5Q5VTE0 462 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 FDX2Q6P4F2 183 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 KCTD9Q7L273 389 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 LURAP1LQ8IV03 231 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 GATSQ8NAP1 163 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 OTOSQ8NHW6 89 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 CASTOR1Q8WTX7 329 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 FAM3CQ92520 227 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 OR8B4Q96RC9 309 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 LPAR4Q99677 370 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 CMKLR1Q99788 373 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 SLC17A9Q9BYT1 436 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 SYT4Q9H2B2 425 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 SEMA6CQ9H3T2 930 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 CHMP1AQ9HD42 196 aaPredicted RBP12.81□□□□□ -0.36
SRP54-202ENST00000546080 MMP25Q9NPA2 562 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 TMEM100Q9NV29 134 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 SLC2A8Q9NY64 477 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 TAS2R4Q9NYW5 299 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 MYEF2Q9P2K5 600 aaKnown RBP12.81□□□□□ -0.36
SRP54-202ENST00000546080 CGGBP1Q9UFW8 167 aaPredicted RBP12.81□□□□□ -0.36
SRP54-202ENST00000546080 CSAG2Q9Y5P2 127 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 TMEM235A6NFC5 223 aa12.8□□□□□ -0.36
SRP54-202ENST00000546080 ADH1BP00325 375 aa12.8□□□□□ -0.36
SRP54-202ENST00000546080 IL2RAP01589 272 aa12.8□□□□□ -0.36
SRP54-202ENST00000546080 HLA-DQA2P01906 255 aa12.8□□□□□ -0.36
SRP54-202ENST00000546080 CD2P06729 351 aa12.8□□□□□ -0.36
SRP54-202ENST00000546080 C5AR1P21730 350 aa12.8□□□□□ -0.36
SRP54-202ENST00000546080 VAMP1P23763 118 aa12.8□□□□□ -0.36
SRP54-202ENST00000546080 PPICP45877 212 aa12.8□□□□□ -0.36
SRP54-202ENST00000546080 VEGFBP49765 207 aa12.8□□□□□ -0.36
SRP54-202ENST00000546080 CCR4P51679 360 aa12.8□□□□□ -0.36
SRP54-202ENST00000546080 RAB38P57729 211 aa12.8□□□□□ -0.36
SRP54-202ENST00000546080 RPL18Q07020 188 aaKnown RBP12.8□□□□□ -0.36
SRP54-202ENST00000546080 SLC17A1Q14916 467 aa12.8□□□□□ -0.36
SRP54-202ENST00000546080 NKAPLQ5M9Q1 402 aa12.8□□□□□ -0.36
SRP54-202ENST00000546080 WBP2NLQ6ICG8 309 aa12.8□□□□□ -0.36
SRP54-202ENST00000546080 SLC35D2Q76EJ3 337 aa12.8□□□□□ -0.36
SRP54-202ENST00000546080 SKA3Q8IX90 412 aa12.8□□□□□ -0.36
SRP54-202ENST00000546080 BAP18Q8IXM2 172 aa12.8□□□□□ -0.36
SRP54-202ENST00000546080 ZNF440Q8IYI8 595 aa12.8□□□□□ -0.36
SRP54-202ENST00000546080 ZDHHC22Q8N966 263 aa12.8□□□□□ -0.36
SRP54-202ENST00000546080 SLC30A7Q8NEW0 376 aa12.8□□□□□ -0.36
SRP54-202ENST00000546080 OR4A4PQ8NGN8 299 aa12.8□□□□□ -0.36
SRP54-202ENST00000546080 LIPHQ8WWY8 451 aa12.8□□□□□ -0.36
SRP54-202ENST00000546080 RSC1A1Q92681 617 aa12.8□□□□□ -0.36
SRP54-202ENST00000546080 CCNL2Q96S94 520 aaPredicted RBP12.8□□□□□ -0.36
SRP54-202ENST00000546080 CRB3Q9BUF7 120 aa12.8□□□□□ -0.36
SRP54-202ENST00000546080 UQCC1Q9NVA1 299 aa12.8□□□□□ -0.36
SRP54-202ENST00000546080 A0A0A6YYH2 397 aa12.8□□□□□ -0.36
SRP54-202ENST00000546080 A0A0B4J2A0 478 aa12.8□□□□□ -0.36
SRP54-202ENST00000546080 FITM1A5D6W6 292 aa12.8□□□□□ -0.36
SRP54-202ENST00000546080 C5orf51A6NDU8 294 aa12.8□□□□□ -0.36
SRP54-202ENST00000546080 A6NJ64 397 aa12.8□□□□□ -0.36
SRP54-202ENST00000546080 HRKO00198 91 aa12.8□□□□□ -0.36
SRP54-202ENST00000546080 HEXAP06865 529 aa12.8□□□□□ -0.36
SRP54-202ENST00000546080 ASAH2BP0C7U1 165 aa12.8□□□□□ -0.36
SRP54-202ENST00000546080 PVRP15151 417 aa12.8□□□□□ -0.36
SRP54-202ENST00000546080 ABOP16442 354 aa12.8□□□□□ -0.36
SRP54-202ENST00000546080 PSMB6P28072 239 aa12.8□□□□□ -0.36
SRP54-202ENST00000546080 MOGAT2Q3SYC2 334 aa12.8□□□□□ -0.36
SRP54-202ENST00000546080 OTPQ5XKR4 325 aa12.8□□□□□ -0.36
SRP54-202ENST00000546080 IL34Q6ZMJ4 242 aa12.8□□□□□ -0.36
SRP54-202ENST00000546080 RD3Q7Z3Z2 195 aa12.8□□□□□ -0.36
SRP54-202ENST00000546080 ATG4DQ86TL0 474 aaPredicted RBP12.8□□□□□ -0.36
SRP54-202ENST00000546080 FAM174AQ8TBP5 190 aa12.8□□□□□ -0.36
SRP54-202ENST00000546080 TMED6Q8WW62 240 aa12.8□□□□□ -0.36
SRP54-202ENST00000546080 DEFB118Q96PH6 123 aa12.8□□□□□ -0.36
SRP54-202ENST00000546080 KXD1Q9BQD3 176 aa12.8□□□□□ -0.36
SRP54-202ENST00000546080 SELENOIQ9C0D9 397 aa12.8□□□□□ -0.36
SRP54-202ENST00000546080 SHPKQ9UHJ6 478 aa12.8□□□□□ -0.36
SRP54-202ENST00000546080 TBX21Q9UL17 535 aa12.8□□□□□ -0.36
SRP54-202ENST00000546080 TMED7Q9Y3B3 224 aa12.8□□□□□ -0.36
SRP54-202ENST00000546080 MRPS18BQ9Y676 258 aaKnown RBP12.8□□□□□ -0.36
SRP54-202ENST00000546080 TEX13DA0A0J9YY54 714 aaPredicted RBP12.79□□□□□ -0.36
SRP54-202ENST00000546080 C13orf42A0A1B0GVH6 325 aa12.79□□□□□ -0.36
SRP54-202ENST00000546080 A0A1W2PPC1 479 aa12.79□□□□□ -0.36
SRP54-202ENST00000546080 CPED1A4D0V7 1026 aa12.79□□□□□ -0.36
SRP54-202ENST00000546080 FOXS1O43638 330 aa12.79□□□□□ -0.36
SRP54-202ENST00000546080 EIF3GO75821 320 aaKnown RBP eCLIP12.79□□□□□ -0.36
SRP54-202ENST00000546080 FARS2O95363 451 aaKnown RBP12.79□□□□□ -0.36
SRP54-202ENST00000546080 GLAP06280 429 aa12.79□□□□□ -0.36
SRP54-202ENST00000546080 CRHP06850 196 aa12.79□□□□□ -0.36
SRP54-202ENST00000546080 CENPAP49450 140 aa12.79□□□□□ -0.36
SRP54-202ENST00000546080 NAAAQ02083 359 aa12.79□□□□□ -0.36
SRP54-202ENST00000546080 TMEM184AQ6ZMB5 413 aa12.79□□□□□ -0.36
SRP54-202ENST00000546080 TAF8Q7Z7C8 310 aa12.79□□□□□ -0.36
SRP54-202ENST00000546080 PARGQ86W56 976 aa12.79□□□□□ -0.36
SRP54-202ENST00000546080 CSNK1A1LQ8N752 337 aa12.79□□□□□ -0.36
SRP54-202ENST00000546080 OR14C36Q8NHC7 312 aa12.79□□□□□ -0.36
SRP54-202ENST00000546080 RNF128Q8TEB7 428 aa12.79□□□□□ -0.36
SRP54-202ENST00000546080 ASB5Q8WWX0 329 aa12.79□□□□□ -0.36
SRP54-202ENST00000546080 PPP1R14AQ96A00 147 aa12.79□□□□□ -0.36
SRP54-202ENST00000546080 LHX6Q9UPM6 363 aa12.79□□□□□ -0.36
SRP54-202ENST00000546080 COL4A2P08572 1712 aa12.79□□□□□ -0.36
SRP54-202ENST00000546080 MEX3AA1L020 520 aaKnown RBP12.79□□□□□ -0.36
SRP54-202ENST00000546080 DCDC2BA2VCK2 349 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms