RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 AKAP9Q99996 3911 aa17.78■□□□□ 0.44
HMGA2-211ENST00000545998 TFP02787 698 aa17.78■□□□□ 0.44
HMGA2-211ENST00000545998 SERPINA5P05154 406 aa17.78■□□□□ 0.44
HMGA2-211ENST00000545998 GYPBP06028 91 aa17.78■□□□□ 0.44
HMGA2-211ENST00000545998 PCBD1P61457 104 aa17.78■□□□□ 0.44
HMGA2-211ENST00000545998 SNAPC1Q16533 368 aa17.78■□□□□ 0.44
HMGA2-211ENST00000545998 MEP1BQ16820 701 aa17.78■□□□□ 0.44
HMGA2-211ENST00000545998 C12orf73Q69YU5 71 aa17.78■□□□□ 0.44
HMGA2-211ENST00000545998 OR51L1Q8NGJ5 315 aa17.78■□□□□ 0.44
HMGA2-211ENST00000545998 LURAP1Q96LR2 239 aa17.78■□□□□ 0.44
HMGA2-211ENST00000545998 DCLRE1BQ9H816 532 aa17.78■□□□□ 0.44
HMGA2-211ENST00000545998 MOKQ9UQ07 419 aa17.78■□□□□ 0.44
HMGA2-211ENST00000545998 VPS13CQ709C8 3753 aa17.77■□□□□ 0.44
HMGA2-211ENST00000545998 PAICSP22234 425 aaKnown RBP17.77■□□□□ 0.44
HMGA2-211ENST00000545998 CALCRP30988 508 aa17.77■□□□□ 0.44
HMGA2-211ENST00000545998 RAD23AP54725 363 aa17.77■□□□□ 0.44
HMGA2-211ENST00000545998 PSG4Q00888 419 aa17.77■□□□□ 0.44
HMGA2-211ENST00000545998 ZNF672Q499Z4 452 aaPredicted RBP17.77■□□□□ 0.44
HMGA2-211ENST00000545998 PABPC1L2AQ5JQF8 200 aa17.77■□□□□ 0.44
HMGA2-211ENST00000545998 SLC22A25Q6T423 547 aa17.77■□□□□ 0.44
HMGA2-211ENST00000545998 IL17RDQ8NFM7 739 aa17.77■□□□□ 0.44
HMGA2-211ENST00000545998 PLEKHA8Q96JA3 519 aa17.77■□□□□ 0.44
HMGA2-211ENST00000545998 OR2H1Q9GZK4 316 aa17.77■□□□□ 0.44
HMGA2-211ENST00000545998 HINT3Q9NQE9 182 aaKnown RBP17.77■□□□□ 0.44
HMGA2-211ENST00000545998 MRPL22Q9NWU5 206 aaKnown RBP17.77■□□□□ 0.44
HMGA2-211ENST00000545998 TIMM10BQ9Y5J6 103 aa17.77■□□□□ 0.44
HMGA2-211ENST00000545998 IGHV2OR16-5A0A0B4J2B6 119 aa17.76■□□□□ 0.43
HMGA2-211ENST00000545998 PRR23D1E9PI22 279 aaPredicted RBP17.76■□□□□ 0.43
HMGA2-211ENST00000545998 CRYAAP02489 173 aa17.76■□□□□ 0.43
HMGA2-211ENST00000545998 PRR23D2P0DMB1 279 aaPredicted RBP17.76■□□□□ 0.43
HMGA2-211ENST00000545998 EFNB1P98172 346 aa17.76■□□□□ 0.43
HMGA2-211ENST00000545998 TEKQ02763 1124 aa17.76■□□□□ 0.43
HMGA2-211ENST00000545998 AQP6Q13520 282 aa17.76■□□□□ 0.43
HMGA2-211ENST00000545998 TRIP10Q15642 601 aa17.76■□□□□ 0.43
HMGA2-211ENST00000545998 PLBD1Q6P4A8 553 aa17.76■□□□□ 0.43
HMGA2-211ENST00000545998 ZNF771Q7L3S4 317 aaPredicted RBP17.76■□□□□ 0.43
HMGA2-211ENST00000545998 CPOQ8IVL8 374 aa17.76■□□□□ 0.43
HMGA2-211ENST00000545998 AKAP1Q92667 903 aaKnown RBP eCLIP17.76■□□□□ 0.43
HMGA2-211ENST00000545998 NEUROG1Q92886 237 aa17.76■□□□□ 0.43
HMGA2-211ENST00000545998 OTULINQ96BN8 352 aa17.76■□□□□ 0.43
HMGA2-211ENST00000545998 PRRG3Q9BZD7 231 aa17.76■□□□□ 0.43
HMGA2-211ENST00000545998 WNT5BQ9H1J7 359 aa17.76■□□□□ 0.43
HMGA2-211ENST00000545998 ASH2LQ9UBL3 628 aa17.76■□□□□ 0.43
HMGA2-211ENST00000545998 DSCAMO60469 2012 aa17.76■□□□□ 0.43
HMGA2-211ENST00000545998 CYSRT1A8MQ03 144 aa17.75■□□□□ 0.43
HMGA2-211ENST00000545998 E9PQ18 207 aa17.75■□□□□ 0.43
HMGA2-211ENST00000545998 ATP6V1G2-DDX39BF2Z307 99 aa17.75■□□□□ 0.43
HMGA2-211ENST00000545998 PRKYO43930 277 aa17.75■□□□□ 0.43
HMGA2-211ENST00000545998 HLA-DQA2P01906 255 aa17.75■□□□□ 0.43
HMGA2-211ENST00000545998 PLP2Q04941 152 aa17.75■□□□□ 0.43
HMGA2-211ENST00000545998 LINC01590Q5TEZ4 76 aa17.75■□□□□ 0.43
HMGA2-211ENST00000545998 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.75■□□□□ 0.43
HMGA2-211ENST00000545998 DEPDC4Q8N2C3 294 aa17.75■□□□□ 0.43
HMGA2-211ENST00000545998 CPEB3Q8NE35 698 aaKnown RBP17.75■□□□□ 0.43
HMGA2-211ENST00000545998 AKR7LQ8NHP1 331 aa17.75■□□□□ 0.43
HMGA2-211ENST00000545998 NRGNQ92686 78 aa17.75■□□□□ 0.43
HMGA2-211ENST00000545998 KCNS3Q9BQ31 491 aa17.75■□□□□ 0.43
HMGA2-211ENST00000545998 GRIP2Q9C0E4 1043 aa17.75■□□□□ 0.43
HMGA2-211ENST00000545998 UBTD1Q9HAC8 227 aa17.75■□□□□ 0.43
HMGA2-211ENST00000545998 LHFPL6Q9Y693 200 aa17.75■□□□□ 0.43
HMGA2-211ENST00000545998 M0R129 80 aa17.74■□□□□ 0.43
HMGA2-211ENST00000545998 HS3ST1O14792 307 aa17.74■□□□□ 0.43
HMGA2-211ENST00000545998 ZNF35P13682 527 aa17.74■□□□□ 0.43
HMGA2-211ENST00000545998 CDH11P55287 796 aa17.74■□□□□ 0.43
HMGA2-211ENST00000545998 ZIK1Q3SY52 487 aaPredicted RBP17.74■□□□□ 0.43
HMGA2-211ENST00000545998 LPCAT4Q643R3 524 aa17.74■□□□□ 0.43
HMGA2-211ENST00000545998 LYPD4Q6UWN0 246 aa17.74■□□□□ 0.43
HMGA2-211ENST00000545998 CXXC5Q7LFL8 322 aaKnown RBP17.74■□□□□ 0.43
HMGA2-211ENST00000545998 SLC30A7Q8NEW0 376 aa17.74■□□□□ 0.43
HMGA2-211ENST00000545998 MBOAT4Q96T53 435 aa17.74■□□□□ 0.43
HMGA2-211ENST00000545998 LIME1Q9H400 295 aa17.74■□□□□ 0.43
HMGA2-211ENST00000545998 C1orf198Q9H425 327 aa17.74■□□□□ 0.43
HMGA2-211ENST00000545998 TOR3AQ9H497 397 aa17.74■□□□□ 0.43
HMGA2-211ENST00000545998 NKX1-2Q9UD57 310 aaPredicted RBP17.74■□□□□ 0.43
HMGA2-211ENST00000545998 IQCMA0A1B0GVH7 501 aa17.74■□□□□ 0.43
HMGA2-211ENST00000545998 TVP23AA6NH52 213 aa17.74■□□□□ 0.43
HMGA2-211ENST00000545998 CASQ2O14958 399 aaPredicted RBP17.74■□□□□ 0.43
HMGA2-211ENST00000545998 SNAP29O95721 258 aa17.74■□□□□ 0.43
HMGA2-211ENST00000545998 PTHP01270 115 aa17.74■□□□□ 0.43
HMGA2-211ENST00000545998 APEX1P27695 318 aaKnown RBP17.74■□□□□ 0.43
HMGA2-211ENST00000545998 PEX2P28328 305 aa17.74■□□□□ 0.43
HMGA2-211ENST00000545998 FMO3P31513 532 aa17.74■□□□□ 0.43
HMGA2-211ENST00000545998 GGT2P36268 569 aa17.74■□□□□ 0.43
HMGA2-211ENST00000545998 SCRN3Q0VDG4 424 aa17.74■□□□□ 0.43
HMGA2-211ENST00000545998 ZNF774Q6NX45 483 aa17.74■□□□□ 0.43
HMGA2-211ENST00000545998 B3GLCTQ6Y288 498 aa17.74■□□□□ 0.43
HMGA2-211ENST00000545998 BBS1Q8NFJ9 593 aa17.74■□□□□ 0.43
HMGA2-211ENST00000545998 OR10H5Q8NGA6 315 aa17.74■□□□□ 0.43
HMGA2-211ENST00000545998 OR6K6Q8NGW6 343 aa17.74■□□□□ 0.43
HMGA2-211ENST00000545998 OR51V1Q9H2C8 321 aa17.74■□□□□ 0.43
HMGA2-211ENST00000545998 POLR1DQ9Y2S0 133 aa17.74■□□□□ 0.43
HMGA2-211ENST00000545998 MAP1AP78559 2803 aaPredicted RBP17.73■□□□□ 0.43
HMGA2-211ENST00000545998 E7EQL1 145 aa17.73■□□□□ 0.43
HMGA2-211ENST00000545998 PRODHO43272 600 aa17.73■□□□□ 0.43
HMGA2-211ENST00000545998 TLX2O43763 284 aaPredicted RBP17.73■□□□□ 0.43
HMGA2-211ENST00000545998 GLCEO94923 617 aa17.73■□□□□ 0.43
HMGA2-211ENST00000545998 SLC2A5P22732 501 aa17.73■□□□□ 0.43
HMGA2-211ENST00000545998 BLVRAP53004 296 aa17.73■□□□□ 0.43
HMGA2-211ENST00000545998 HIST1H3AP68431 136 aa17.73■□□□□ 0.43
HMGA2-211ENST00000545998 HGFACQ04756 655 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms