RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 DUSP13Q9UII6 198 aa13.54□□□□□ -0.24
CCDC78-216ENST00000544996 GPR160Q9UJ42 338 aa13.54□□□□□ -0.24
CCDC78-216ENST00000544996 COA3Q9Y2R0 106 aaPredicted RBP13.54□□□□□ -0.24
CCDC78-216ENST00000544996 U3KQV3 271 aa13.54□□□□□ -0.24
CCDC78-216ENST00000544996 VPS13CQ709C8 3753 aa13.54□□□□□ -0.24
CCDC78-216ENST00000544996 ACANP16112 2415 aa13.53□□□□□ -0.24
CCDC78-216ENST00000544996 IGHV4-30-2A0A087WSY4 118 aa13.53□□□□□ -0.24
CCDC78-216ENST00000544996 DHRS12A0PJE2 317 aa13.53□□□□□ -0.24
CCDC78-216ENST00000544996 C5orf49A4QMS7 147 aa13.53□□□□□ -0.24
CCDC78-216ENST00000544996 M0R233 179 aa13.53□□□□□ -0.24
CCDC78-216ENST00000544996 LY6HO94772 140 aa13.53□□□□□ -0.24
CCDC78-216ENST00000544996 RENP00797 406 aa13.53□□□□□ -0.24
CCDC78-216ENST00000544996 SLC25A16P16260 332 aa13.53□□□□□ -0.24
CCDC78-216ENST00000544996 CDKN2AP42771 156 aaKnown RBP13.53□□□□□ -0.24
CCDC78-216ENST00000544996 CENPAP49450 140 aa13.53□□□□□ -0.24
CCDC78-216ENST00000544996 PDLIM4P50479 330 aa13.53□□□□□ -0.24
CCDC78-216ENST00000544996 ENDOGQ14249 297 aaKnown RBP13.53□□□□□ -0.24
CCDC78-216ENST00000544996 FLOT2Q14254 428 aa13.53□□□□□ -0.24
CCDC78-216ENST00000544996 GK3PQ14409 553 aa13.53□□□□□ -0.24
CCDC78-216ENST00000544996 MICAQ29983 383 aa13.53□□□□□ -0.24
CCDC78-216ENST00000544996 LEG1Q6P5S2 330 aa13.53□□□□□ -0.24
CCDC78-216ENST00000544996 PTCHD4Q6ZW05 846 aa13.53□□□□□ -0.24
CCDC78-216ENST00000544996 AQP11Q8NBQ7 271 aa13.53□□□□□ -0.24
CCDC78-216ENST00000544996 ICA1LQ8NDH6 482 aa13.53□□□□□ -0.24
CCDC78-216ENST00000544996 OR9Q2Q8NGE9 314 aa13.53□□□□□ -0.24
CCDC78-216ENST00000544996 C10orf105Q8TEF2 133 aa13.53□□□□□ -0.24
CCDC78-216ENST00000544996 SLC7A6OSQ96CW6 309 aaPredicted RBP13.53□□□□□ -0.24
CCDC78-216ENST00000544996 POM121L2Q96KW2 1035 aa13.53□□□□□ -0.24
CCDC78-216ENST00000544996 NUAK2Q9H093 628 aa13.53□□□□□ -0.24
CCDC78-216ENST00000544996 OR51B6Q9H340 312 aa13.53□□□□□ -0.24
CCDC78-216ENST00000544996 REV1Q9UBZ9 1251 aa13.53□□□□□ -0.24
CCDC78-216ENST00000544996 NDRG4Q9ULP0 352 aaKnown RBP13.53□□□□□ -0.24
CCDC78-216ENST00000544996 CDH10Q9Y6N8 788 aa13.53□□□□□ -0.24
CCDC78-216ENST00000544996 ZNF469Q96JG9 3925 aaPredicted RBP13.53□□□□□ -0.24
CCDC78-216ENST00000544996 A0A1W2PPW3 197 aa13.52□□□□□ -0.25
CCDC78-216ENST00000544996 NDUFS8O00217 210 aa13.52□□□□□ -0.25
CCDC78-216ENST00000544996 GNGT2O14610 69 aa13.52□□□□□ -0.25
CCDC78-216ENST00000544996 GASTP01350 101 aa13.52□□□□□ -0.25
CCDC78-216ENST00000544996 TP53P04637 393 aaPredicted RBP13.52□□□□□ -0.25
CCDC78-216ENST00000544996 GSTM3P21266 225 aa13.52□□□□□ -0.25
CCDC78-216ENST00000544996 RASSF2P50749 326 aa13.52□□□□□ -0.25
CCDC78-216ENST00000544996 LSM6P62312 80 aaKnown RBP13.52□□□□□ -0.25
CCDC78-216ENST00000544996 PPP1R8Q12972 351 aaKnown RBP13.52□□□□□ -0.25
CCDC78-216ENST00000544996 AQP6Q13520 282 aa13.52□□□□□ -0.25
CCDC78-216ENST00000544996 CARTPTQ16568 116 aa13.52□□□□□ -0.25
CCDC78-216ENST00000544996 MSMPQ1L6U9 139 aa13.52□□□□□ -0.25
CCDC78-216ENST00000544996 CLEC12AQ5QGZ9 265 aa13.52□□□□□ -0.25
CCDC78-216ENST00000544996 ZNF770Q6IQ21 691 aaPredicted RBP13.52□□□□□ -0.25
CCDC78-216ENST00000544996 PGM2L1Q6PCE3 622 aa13.52□□□□□ -0.25
CCDC78-216ENST00000544996 ARL9Q6T311 187 aa13.52□□□□□ -0.25
CCDC78-216ENST00000544996 UGT2A3Q6UWM9 527 aa13.52□□□□□ -0.25
CCDC78-216ENST00000544996 LRP11Q86VZ4 500 aa13.52□□□□□ -0.25
CCDC78-216ENST00000544996 SPATA24Q86W54 205 aa13.52□□□□□ -0.25
CCDC78-216ENST00000544996 C1orf174Q8IYL3 243 aa13.52□□□□□ -0.25
CCDC78-216ENST00000544996 ADGRG5Q8IZF4 528 aa13.52□□□□□ -0.25
CCDC78-216ENST00000544996 ZCCHC24Q8N2G6 241 aaKnown RBP13.52□□□□□ -0.25
CCDC78-216ENST00000544996 MAPK1IP1LQ8NDC0 245 aa13.52□□□□□ -0.25
CCDC78-216ENST00000544996 OR4K13Q8NH42 304 aa13.52□□□□□ -0.25
CCDC78-216ENST00000544996 SYNPRQ8TBG9 265 aa13.52□□□□□ -0.25
CCDC78-216ENST00000544996 CANT1Q8WVQ1 401 aa13.52□□□□□ -0.25
CCDC78-216ENST00000544996 FOXN4Q96NZ1 517 aa13.52□□□□□ -0.25
CCDC78-216ENST00000544996 SNX18Q96RF0 628 aa13.52□□□□□ -0.25
CCDC78-216ENST00000544996 NMNAT3Q96T66 252 aa13.52□□□□□ -0.25
CCDC78-216ENST00000544996 WNT5BQ9H1J7 359 aa13.52□□□□□ -0.25
CCDC78-216ENST00000544996 YY1AP1Q9H869 796 aa13.52□□□□□ -0.25
CCDC78-216ENST00000544996 FZR1Q9UM11 496 aa13.52□□□□□ -0.25
CCDC78-216ENST00000544996 MTORP42345 2549 aa13.51□□□□□ -0.25
CCDC78-216ENST00000544996 LOC100509620A0A075B734 347 aa13.51□□□□□ -0.25
CCDC78-216ENST00000544996 LOC390937A0A1W2PQ73 354 aa13.51□□□□□ -0.25
CCDC78-216ENST00000544996 ATP5HO75947 161 aa13.51□□□□□ -0.25
CCDC78-216ENST00000544996 CST1P01037 141 aa13.51□□□□□ -0.25
CCDC78-216ENST00000544996 SCG5P05408 212 aa13.51□□□□□ -0.25
CCDC78-216ENST00000544996 COX5BP10606 129 aa13.51□□□□□ -0.25
CCDC78-216ENST00000544996 ZNF250P15622 560 aa13.51□□□□□ -0.25
CCDC78-216ENST00000544996 HIST1H1CP16403 213 aaKnown RBP13.51□□□□□ -0.25
CCDC78-216ENST00000544996 KLF3P57682 345 aaPredicted RBP13.51□□□□□ -0.25
CCDC78-216ENST00000544996 GLO1Q04760 184 aa13.51□□□□□ -0.25
CCDC78-216ENST00000544996 BNIP1Q12981 228 aa13.51□□□□□ -0.25
CCDC78-216ENST00000544996 MOGQ16653 247 aa13.51□□□□□ -0.25
CCDC78-216ENST00000544996 NKPD1Q17RQ9 610 aa13.51□□□□□ -0.25
CCDC78-216ENST00000544996 ZNF774Q6NX45 483 aa13.51□□□□□ -0.25
CCDC78-216ENST00000544996 RASSF6Q6ZTQ3 369 aa13.51□□□□□ -0.25
CCDC78-216ENST00000544996 OR1J1Q8NGS3 322 aa13.51□□□□□ -0.25
CCDC78-216ENST00000544996 PIMREGQ9BSJ6 248 aa13.51□□□□□ -0.25
CCDC78-216ENST00000544996 EGLN3Q9H6Z9 239 aa13.51□□□□□ -0.25
CCDC78-216ENST00000544996 SRA1Q9HD15 236 aaKnown RBP13.51□□□□□ -0.25
CCDC78-216ENST00000544996 TBC1D23Q9NUY8 699 aa13.51□□□□□ -0.25
CCDC78-216ENST00000544996 SLCO1C1Q9NYB5 712 aa13.51□□□□□ -0.25
CCDC78-216ENST00000544996 IL20Q9NYY1 176 aa13.51□□□□□ -0.25
CCDC78-216ENST00000544996 B9D1Q9UPM9 204 aa13.51□□□□□ -0.25
CCDC78-216ENST00000544996 POLR1DQ9Y2S0 133 aa13.51□□□□□ -0.25
CCDC78-216ENST00000544996 GSC2O15499 205 aa13.5□□□□□ -0.25
CCDC78-216ENST00000544996 SGCEO43556 437 aa13.5□□□□□ -0.25
CCDC78-216ENST00000544996 DOK2O60496 412 aa13.5□□□□□ -0.25
CCDC78-216ENST00000544996 MPZL1O95297 269 aa13.5□□□□□ -0.25
CCDC78-216ENST00000544996 DAOP14920 347 aa13.5□□□□□ -0.25
CCDC78-216ENST00000544996 GCH1P30793 250 aa13.5□□□□□ -0.25
CCDC78-216ENST00000544996 ALDH3B1P43353 468 aa13.5□□□□□ -0.25
CCDC78-216ENST00000544996 ARHGDIAP52565 204 aa13.5□□□□□ -0.25
CCDC78-216ENST00000544996 KCNMB1Q16558 191 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms