RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 STEAP1BQ6NZ63 245 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 ESPNLQ6ZVH7 1005 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 ABHD12BQ7Z5M8 362 aaPredicted RBP5.26□□□□□ -1.57
VPS50-220ENST00000544910 BPIFB2Q8N4F0 458 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 ARIH2OSQ8N7S6 290 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 CCDC71LQ8N9Z2 235 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 PLPP7Q8NBV4 271 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 DUSP18Q8NEJ0 188 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 OR6M1Q8NGM8 313 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 SMIM4Q8WVI0 70 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 MIB2Q96AX9 1013 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 RAB39BQ96DA2 213 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 ST6GAL2Q96JF0 529 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 C1orf198Q9H425 327 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 FAM212BQ9NTI7 297 aaPredicted RBP5.26□□□□□ -1.57
VPS50-220ENST00000544910 FBXL4Q9UKA2 621 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 SLC7A11Q9UPY5 501 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 A0A1B0GUH1 482 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 A8MXE2 369 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 ALOX12BO75342 701 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 MPIG6BO95866 241 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 RAB6AP20340 208 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 GNRHRP30968 328 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 MAGEB1P43366 347 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 RFX2P48378 723 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 PPP1CAP62136 330 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 RSU1Q15404 277 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 CEBPEQ15744 281 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 DMKNQ6E0U4 476 aaPredicted RBP5.25□□□□□ -1.57
VPS50-220ENST00000544910 H1FNTQ75WM6 255 aaPredicted RBP5.25□□□□□ -1.57
VPS50-220ENST00000544910 DPPA2Q7Z7J5 298 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 NAXEQ8NCW5 288 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 C17orf47Q8NEP4 570 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 STRADBQ9C0K7 418 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 EXOSC3Q9NQT5 275 aaKnown RBP5.25□□□□□ -1.57
VPS50-220ENST00000544910 D6RAR5 112 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 PRKNO60260 465 aaPredicted RBP5.25□□□□□ -1.57
VPS50-220ENST00000544910 FADS1O60427 444 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 HTR3BO95264 441 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 P04436 131 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 LPLP06858 475 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 MNX1P50219 401 aaPredicted RBP5.25□□□□□ -1.57
VPS50-220ENST00000544910 ACKR1Q16570 336 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 ACTBL2Q562R1 376 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 FAM109BQ6ICB4 259 aaPredicted RBP5.25□□□□□ -1.57
VPS50-220ENST00000544910 FAM57BQ71RH2 274 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 RABEPKQ7Z6M1 372 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 CD163Q86VB7 1156 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 PPP1R3BQ86XI6 285 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 CLRN3Q8NCR9 226 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 CSNK2A3Q8NEV1 391 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 OIT3Q8WWZ8 545 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 DVL3Q92997 716 aaPredicted RBP5.25□□□□□ -1.57
VPS50-220ENST00000544910 KTI12Q96EK9 354 aaPredicted RBP5.25□□□□□ -1.57
VPS50-220ENST00000544910 TSSK2Q96PF2 358 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 TSPAN32Q96QS1 320 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 SLCO5A1Q9H2Y9 848 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 CHST11Q9NPF2 352 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 ALKBH4Q9NXW9 302 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 SLCO1C1Q9NYB5 712 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 WSB2Q9NYS7 404 aaPredicted RBP5.25□□□□□ -1.57
VPS50-220ENST00000544910 KPTNQ9Y664 436 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 NUDT21O43809 227 aaKnown RBP5.25□□□□□ -1.57
VPS50-220ENST00000544910 DOK2O60496 412 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 ATG12O94817 140 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 PMS2P2O95744 297 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 HLA-AP01891 365 aaKnown RBP5.25□□□□□ -1.57
VPS50-220ENST00000544910 ATF1P18846 271 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 PNLIPRP2P54317 469 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 ZNF117Q03924 483 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 PMPCAQ10713 525 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 SLC17A1Q14916 467 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 TMEM41BQ5BJD5 291 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 OR10K2Q6IF99 312 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 LPCAT3Q6P1A2 487 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 FAM199XQ6PEV8 388 aaPredicted RBP5.25□□□□□ -1.57
VPS50-220ENST00000544910 SYT13Q7L8C5 426 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 SGPP2Q8IWX5 399 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 GPR137CQ8N3F9 429 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 SLC22A24Q8N4F4 322 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 ASB13Q8WXK3 278 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 TXNIPQ9H3M7 391 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 HRH4Q9H3N8 390 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 MMP25Q9NPA2 562 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 KLF15Q9UIH9 416 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 RAB22AQ9UL26 194 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 IGHV3-20A0A0C4DH32 117 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 A0A1W2PQF6 199 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 POM121CA8CG34 1229 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 AKR7A2O43488 359 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 GSTZ1O43708 216 aaPredicted RBP5.25□□□□□ -1.57
VPS50-220ENST00000544910 MED6O75586 246 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 SYNGR4O95473 234 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 DIRAS3O95661 229 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 GAAP10253 952 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 IFNGR1P15260 489 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 GALNSP34059 522 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 CXCL12P48061 93 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 GZMKP49863 264 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 UBE2IP63279 158 aaKnown RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms