RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 MAMSTRQ6ZN01 415 aa11.18□□□□□ -0.62
PAAF1-215ENST00000544909 Q6ZTK2 550 aa11.18□□□□□ -0.62
PAAF1-215ENST00000544909 COX15Q7KZN9 410 aa11.18□□□□□ -0.62
PAAF1-215ENST00000544909 NDUFAF7Q7L592 441 aa11.18□□□□□ -0.62
PAAF1-215ENST00000544909 NAXDQ8IW45 347 aa11.18□□□□□ -0.62
PAAF1-215ENST00000544909 FTMTQ8N4E7 242 aa11.18□□□□□ -0.62
PAAF1-215ENST00000544909 BMPERQ8N8U9 685 aa11.18□□□□□ -0.62
PAAF1-215ENST00000544909 NFAM1Q8NET5 270 aaPredicted RBP11.18□□□□□ -0.62
PAAF1-215ENST00000544909 ST7LQ8TDW4 575 aa11.18□□□□□ -0.62
PAAF1-215ENST00000544909 DUSP19Q8WTR2 217 aa11.18□□□□□ -0.62
PAAF1-215ENST00000544909 PNPLA2Q96AD5 504 aa11.18□□□□□ -0.62
PAAF1-215ENST00000544909 SMAD5Q99717 465 aaKnown RBP11.18□□□□□ -0.62
PAAF1-215ENST00000544909 UQCC2Q9BRT2 126 aa11.18□□□□□ -0.62
PAAF1-215ENST00000544909 CHST11Q9NPF2 352 aa11.18□□□□□ -0.62
PAAF1-215ENST00000544909 WNT16Q9UBV4 365 aa11.18□□□□□ -0.62
PAAF1-215ENST00000544909 ZNF69Q9UC07 566 aa11.18□□□□□ -0.62
PAAF1-215ENST00000544909 NPIPA1Q9UND3 350 aa11.18□□□□□ -0.62
PAAF1-215ENST00000544909 RPH3AQ9Y2J0 694 aaPredicted RBP11.18□□□□□ -0.62
PAAF1-215ENST00000544909 RP1P56715 2156 aa11.17□□□□□ -0.62
PAAF1-215ENST00000544909 RPS10-NUDT3A0A1W2PQS6 291 aa11.17□□□□□ -0.62
PAAF1-215ENST00000544909 CDC14CA4D256 554 aa11.17□□□□□ -0.62
PAAF1-215ENST00000544909 PNPP00491 289 aa11.17□□□□□ -0.62
PAAF1-215ENST00000544909 CD74P04233 296 aa11.17□□□□□ -0.62
PAAF1-215ENST00000544909 NR2C1P13056 603 aa11.17□□□□□ -0.62
PAAF1-215ENST00000544909 TBPP20226 339 aa11.17□□□□□ -0.62
PAAF1-215ENST00000544909 HSD11B1P28845 292 aa11.17□□□□□ -0.62
PAAF1-215ENST00000544909 RAD52P43351 418 aa11.17□□□□□ -0.62
PAAF1-215ENST00000544909 MEF2DQ14814 521 aa11.17□□□□□ -0.62
PAAF1-215ENST00000544909 ZNF239Q16600 458 aaKnown RBP11.17□□□□□ -0.62
PAAF1-215ENST00000544909 SLC35D2Q76EJ3 337 aa11.17□□□□□ -0.62
PAAF1-215ENST00000544909 LYPD6Q86Y78 171 aa11.17□□□□□ -0.62
PAAF1-215ENST00000544909 STT3BQ8TCJ2 826 aa11.17□□□□□ -0.62
PAAF1-215ENST00000544909 SLC25A44Q96H78 314 aaPredicted RBP11.17□□□□□ -0.62
PAAF1-215ENST00000544909 KLHDC3Q9BQ90 382 aa11.17□□□□□ -0.62
PAAF1-215ENST00000544909 GINS4Q9BRT9 223 aa11.17□□□□□ -0.62
PAAF1-215ENST00000544909 IER2Q9BTL4 223 aa11.17□□□□□ -0.62
PAAF1-215ENST00000544909 SLC2A8Q9NY64 477 aa11.17□□□□□ -0.62
PAAF1-215ENST00000544909 OPN4Q9UHM6 478 aa11.17□□□□□ -0.62
PAAF1-215ENST00000544909 FLVCR2Q9UPI3 526 aa11.17□□□□□ -0.62
PAAF1-215ENST00000544909 ADAMTS20P59510 1910 aa11.17□□□□□ -0.62
PAAF1-215ENST00000544909 TMEM272A0A1B0GTI8 110 aa11.16□□□□□ -0.62
PAAF1-215ENST00000544909 A0A1W2PQ72 361 aa11.16□□□□□ -0.62
PAAF1-215ENST00000544909 METTL21EPA6NDL7 271 aa11.16□□□□□ -0.62
PAAF1-215ENST00000544909 H3BUI4 141 aa11.16□□□□□ -0.62
PAAF1-215ENST00000544909 PRKNO60260 465 aaPredicted RBP11.16□□□□□ -0.62
PAAF1-215ENST00000544909 ITGB2P05107 769 aa11.16□□□□□ -0.62
PAAF1-215ENST00000544909 ERCC1P07992 297 aaPredicted RBP11.16□□□□□ -0.62
PAAF1-215ENST00000544909 NFYAP23511 347 aaPredicted RBP11.16□□□□□ -0.62
PAAF1-215ENST00000544909 CALCRP30988 508 aa11.16□□□□□ -0.62
PAAF1-215ENST00000544909 HSF1Q00613 529 aa11.16□□□□□ -0.62
PAAF1-215ENST00000544909 EXOSC2Q13868 293 aaKnown RBP11.16□□□□□ -0.62
PAAF1-215ENST00000544909 CLVS2Q5SYC1 327 aa11.16□□□□□ -0.62
PAAF1-215ENST00000544909 STPG1Q5TH74 334 aa11.16□□□□□ -0.62
PAAF1-215ENST00000544909 ASPHD2Q6ICH7 369 aa11.16□□□□□ -0.62
PAAF1-215ENST00000544909 STEAP1BQ6NZ63 245 aa11.16□□□□□ -0.62
PAAF1-215ENST00000544909 MTFR2Q6P444 385 aa11.16□□□□□ -0.62
PAAF1-215ENST00000544909 TMEM205Q6UW68 189 aa11.16□□□□□ -0.62
PAAF1-215ENST00000544909 LRRC69Q6ZNQ3 347 aa11.16□□□□□ -0.62
PAAF1-215ENST00000544909 ANKRD37Q7Z713 158 aa11.16□□□□□ -0.62
PAAF1-215ENST00000544909 BPHLQ86WA6 291 aaPredicted RBP11.16□□□□□ -0.62
PAAF1-215ENST00000544909 ELMOD2Q8IZ81 293 aa11.16□□□□□ -0.62
PAAF1-215ENST00000544909 OR8H3Q8N146 312 aa11.16□□□□□ -0.62
PAAF1-215ENST00000544909 SLC25A43Q8WUT9 341 aaPredicted RBP11.16□□□□□ -0.62
PAAF1-215ENST00000544909 GCDHQ92947 438 aaPredicted RBP11.16□□□□□ -0.62
PAAF1-215ENST00000544909 MS4A3Q96HJ5 214 aa11.16□□□□□ -0.62
PAAF1-215ENST00000544909 ELF4Q99607 663 aaPredicted RBP11.16□□□□□ -0.62
PAAF1-215ENST00000544909 SLC26A1Q9H2B4 701 aa11.16□□□□□ -0.62
PAAF1-215ENST00000544909 APMAPQ9HDC9 416 aa11.16□□□□□ -0.62
PAAF1-215ENST00000544909 G6PC2Q9NQR9 355 aa11.16□□□□□ -0.62
PAAF1-215ENST00000544909 MRPL15Q9P015 296 aaKnown RBP11.16□□□□□ -0.62
PAAF1-215ENST00000544909 CTSFQ9UBX1 484 aa11.16□□□□□ -0.62
PAAF1-215ENST00000544909 SUSD2Q9UGT4 822 aa11.16□□□□□ -0.62
PAAF1-215ENST00000544909 NUP50Q9UKX7 468 aa11.16□□□□□ -0.62
PAAF1-215ENST00000544909 B3GALT1Q9Y5Z6 326 aa11.16□□□□□ -0.62
PAAF1-215ENST00000544909 EXPH5Q8NEV8 1989 aa11.16□□□□□ -0.62
PAAF1-215ENST00000544909 PCDH15Q96QU1 1955 aa11.16□□□□□ -0.62
PAAF1-215ENST00000544909 TRAV18A0A075B6X5 111 aa11.16□□□□□ -0.62
PAAF1-215ENST00000544909 A0A087WV48 116 aa11.16□□□□□ -0.62
PAAF1-215ENST00000544909 A0A1B0GTH9 108 aa11.16□□□□□ -0.62
PAAF1-215ENST00000544909 LOC102725191A0A1B0GVB3 256 aa11.16□□□□□ -0.62
PAAF1-215ENST00000544909 LOC107986453A0A1B0GWG9 222 aa11.16□□□□□ -0.62
PAAF1-215ENST00000544909 MS4A18H0YCH9 400 aa11.16□□□□□ -0.62
PAAF1-215ENST00000544909 PYCARD-AS1I3L0S3 204 aa11.16□□□□□ -0.62
PAAF1-215ENST00000544909 SOX1O00570 391 aaPredicted RBP11.16□□□□□ -0.62
PAAF1-215ENST00000544909 SDC3O75056 442 aa11.16□□□□□ -0.62
PAAF1-215ENST00000544909 GIMD1P0DJR0 217 aa11.16□□□□□ -0.62
PAAF1-215ENST00000544909 TMIGD3P0DMS9 266 aaPredicted RBP11.16□□□□□ -0.62
PAAF1-215ENST00000544909 RRASP10301 218 aa11.16□□□□□ -0.62
PAAF1-215ENST00000544909 GTF2F2P13984 249 aa11.16□□□□□ -0.62
PAAF1-215ENST00000544909 ADH6P28332 368 aa11.16□□□□□ -0.62
PAAF1-215ENST00000544909 DNASE1L1P49184 302 aa11.16□□□□□ -0.62
PAAF1-215ENST00000544909 ARPC4P59998 168 aa11.16□□□□□ -0.62
PAAF1-215ENST00000544909 TLE3Q04726 772 aa11.16□□□□□ -0.62
PAAF1-215ENST00000544909 MS4A18Q3C1V0 323 aa11.16□□□□□ -0.62
PAAF1-215ENST00000544909 THEM4Q5T1C6 240 aa11.16□□□□□ -0.62
PAAF1-215ENST00000544909 OR7E24Q6IFN5 339 aa11.16□□□□□ -0.62
PAAF1-215ENST00000544909 SLC25A45Q8N413 288 aa11.16□□□□□ -0.62
PAAF1-215ENST00000544909 RBP7Q96R05 134 aa11.16□□□□□ -0.62
PAAF1-215ENST00000544909 CMKLR1Q99788 373 aa11.16□□□□□ -0.62
PAAF1-215ENST00000544909 EDEM2Q9BV94 578 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms