RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 TRIM64BA6NI03 449 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 AQP12BA6NM10 295 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 A8MV72 311 aaPredicted RBP4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 J3KTA2 159 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 IFNL4K9M1U5 179 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 FFAR1O14842 300 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 ARPC3O15145 178 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 SGCEO43556 437 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 SLC16A7O60669 478 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 E2F6O75461 281 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 SEC14L2O76054 403 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 ABHD16AO95870 558 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 TXNDC12O95881 172 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 HLA-DQA2P01906 255 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 APOC1P02654 83 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 ADRA2AP08913 450 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 ZNF250P15622 560 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 ZNF823P16415 610 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 SELEP16581 610 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 TNFRSF1AP19438 455 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 MAKP20794 623 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 ACHEP22303 614 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 CALCRP30988 508 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 SLC15A1P46059 708 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 GPR4P46093 362 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 HMGA2P52926 109 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 RAD23AP54725 363 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 ERVK-25P63136 954 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 TUBA1BP68363 451 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 TUBA4AP68366 448 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 MYBPC1Q00872 1141 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 MALLQ13021 153 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 SNCBQ16143 134 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 FXNQ16595 210 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 HFEQ30201 348 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 RFX4Q33E94 735 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 CHRFAM7AQ494W8 412 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 PABPC1L2AQ5JQF8 200 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 FAM166AQ6J272 317 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 SLC27A4Q6P1M0 643 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 SLC25A47Q6Q0C1 308 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 TBPL2Q6SJ96 375 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 NHLRC1Q6VVB1 395 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 TUBA1AQ71U36 451 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 TRPM8Q7Z2W7 1104 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 AQP12AQ8IXF9 295 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 ZNF786Q8N393 782 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 SVOPLQ8N434 492 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 FITM2Q8N6M3 262 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 FAM86B1Q8N7N1 296 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 OR13C2Q8NGS9 318 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 OR2T4Q8NH00 348 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 MOSPD2Q8NHP6 518 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 C10orf105Q8TEF2 133 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 DNAJC9Q8WXX5 260 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 RDH5Q92781 318 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 ZNF837Q96EG3 531 aaPredicted RBP4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 ELMOD3Q96FG2 381 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 C7orf34Q96L11 122 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 DHRS1Q96LJ7 313 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 ERMAPQ96PL5 475 aaPredicted RBP4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 TSPAN32Q96QS1 320 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 SHARPINQ9H0F6 387 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 RERGLQ9H628 205 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 CHODLQ9H9P2 273 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 NRIP3Q9NQ35 241 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 HINT3Q9NQE9 182 aaKnown RBP4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 POLE4Q9NR33 117 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 ARL8BQ9NVJ2 186 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 TBCCD1Q9NVR7 557 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 TMEM160Q9NX00 188 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 NKIRAS2Q9NYR9 191 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 PLEK2Q9NYT0 353 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 VSX1Q9NZR4 365 aaPredicted RBP4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 TAAR3PQ9P1P4 343 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 KLHL21Q9UJP4 597 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 KCNS2Q9ULS6 477 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 SIGLEC7Q9Y286 467 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 IER3IP1Q9Y5U9 82 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 HRNRQ86YZ3 2850 aaPredicted RBP4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 ZANQ9Y493 2812 aa4.84□□□□□ -1.63
CLSTN3-215ENST00000544584 RIIAD1A6NNX1 92 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 RNF212BA8MTL3 300 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 CDC42EP2O14613 210 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 TIMM8AO60220 97 aaPredicted RBP4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 PIP5K1CO60331 668 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 DOK2O60496 412 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 PTP4A3O75365 173 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 DNAJC8O75937 253 aaPredicted RBP4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 PRSS23O95084 383 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 SLC2A10O95528 541 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 LY6G6DO95868 133 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 CST1P01037 141 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 IGHV3-13P01766 116 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 TFP02787 698 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 HMGN1P05114 100 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 CELA3BP08861 270 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 ANXA8P13928 327 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 ZNF3P17036 446 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 ZNF32P17041 273 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms