RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 MYL12BO14950 172 aa8.38□□□□□ -1.07
YBX3-215ENST00000544504 CD8BP10966 210 aa8.38□□□□□ -1.07
YBX3-215ENST00000544504 CD99P14209 185 aa8.38□□□□□ -1.07
YBX3-215ENST00000544504 NR1H2P55055 460 aa8.38□□□□□ -1.07
YBX3-215ENST00000544504 PCBD1P61457 104 aa8.38□□□□□ -1.07
YBX3-215ENST00000544504 ADAM8P78325 824 aa8.38□□□□□ -1.07
YBX3-215ENST00000544504 ROR2Q01974 943 aaKnown RBP8.38□□□□□ -1.07
YBX3-215ENST00000544504 FMODQ06828 376 aa8.38□□□□□ -1.07
YBX3-215ENST00000544504 MRPL28Q13084 256 aaKnown RBP8.38□□□□□ -1.07
YBX3-215ENST00000544504 TBCEQ15813 527 aaPredicted RBP8.38□□□□□ -1.07
YBX3-215ENST00000544504 C1QTNF12Q5T7M4 302 aa8.38□□□□□ -1.07
YBX3-215ENST00000544504 TSPO2Q5TGU0 170 aa8.38□□□□□ -1.07
YBX3-215ENST00000544504 RTL6Q6ICC9 239 aa8.38□□□□□ -1.07
YBX3-215ENST00000544504 SLC18B1Q6NT16 456 aa8.38□□□□□ -1.07
YBX3-215ENST00000544504 TMEM154Q6P9G4 183 aa8.38□□□□□ -1.07
YBX3-215ENST00000544504 KCTD18Q6PI47 426 aaPredicted RBP8.38□□□□□ -1.07
YBX3-215ENST00000544504 XKRXQ6PP77 449 aa8.38□□□□□ -1.07
YBX3-215ENST00000544504 PLEKHG7Q6ZR37 379 aa8.38□□□□□ -1.07
YBX3-215ENST00000544504 RHOUQ7L0Q8 258 aa8.38□□□□□ -1.07
YBX3-215ENST00000544504 NUFIP2Q7Z417 695 aaKnown RBP8.38□□□□□ -1.07
YBX3-215ENST00000544504 KCTD20Q7Z5Y7 419 aa8.38□□□□□ -1.07
YBX3-215ENST00000544504 SYT9Q86SS6 491 aa8.38□□□□□ -1.07
YBX3-215ENST00000544504 ERI1Q8IV48 349 aaKnown RBP8.38□□□□□ -1.07
YBX3-215ENST00000544504 TIGD4Q8IY51 512 aa8.38□□□□□ -1.07
YBX3-215ENST00000544504 CCDC36Q8IYA8 594 aa8.38□□□□□ -1.07
YBX3-215ENST00000544504 OR10H4Q8NGA5 316 aa8.38□□□□□ -1.07
YBX3-215ENST00000544504 OR6N2Q8NGY6 317 aa8.38□□□□□ -1.07
YBX3-215ENST00000544504 OR2AJ1Q8NGZ0 328 aa8.38□□□□□ -1.07
YBX3-215ENST00000544504 OR52N1Q8NH53 320 aa8.38□□□□□ -1.07
YBX3-215ENST00000544504 CCDC120Q96HB5 630 aa8.38□□□□□ -1.07
YBX3-215ENST00000544504 SIGLEC11Q96RL6 698 aa8.38□□□□□ -1.07
YBX3-215ENST00000544504 TMUB1Q9BVT8 246 aa8.38□□□□□ -1.07
YBX3-215ENST00000544504 SEC61A2Q9H9S3 476 aa8.38□□□□□ -1.07
YBX3-215ENST00000544504 SIAEQ9HAT2 523 aa8.38□□□□□ -1.07
YBX3-215ENST00000544504 CRLF2Q9HC73 371 aa8.38□□□□□ -1.07
YBX3-215ENST00000544504 GPR35Q9HC97 309 aa8.38□□□□□ -1.07
YBX3-215ENST00000544504 POLE4Q9NR33 117 aa8.38□□□□□ -1.07
YBX3-215ENST00000544504 PLSCR4Q9NRQ2 329 aa8.38□□□□□ -1.07
YBX3-215ENST00000544504 SLC7A10Q9NS82 523 aa8.38□□□□□ -1.07
YBX3-215ENST00000544504 ERVK-18Q9QC07 812 aa8.38□□□□□ -1.07
YBX3-215ENST00000544504 ZNF629Q9UEG4 869 aaPredicted RBP8.38□□□□□ -1.07
YBX3-215ENST00000544504 LAMP5Q9UJQ1 280 aa8.38□□□□□ -1.07
YBX3-215ENST00000544504 COMMD3-BMI1R4GMX3 469 aa8.38□□□□□ -1.07
YBX3-215ENST00000544504 FAM221AA4D161 298 aa8.37□□□□□ -1.07
YBX3-215ENST00000544504 FAM171A2A8MVW0 826 aa8.37□□□□□ -1.07
YBX3-215ENST00000544504 ZNF99A8MXY4 864 aaPredicted RBP8.37□□□□□ -1.07
YBX3-215ENST00000544504 J3QRE1 110 aa8.37□□□□□ -1.07
YBX3-215ENST00000544504 ZNF593O00488 134 aaPredicted RBP8.37□□□□□ -1.07
YBX3-215ENST00000544504 DVL2O14641 736 aa8.37□□□□□ -1.07
YBX3-215ENST00000544504 UPK3AO75631 287 aa8.37□□□□□ -1.07
YBX3-215ENST00000544504 MT-ND2P03891 347 aa8.37□□□□□ -1.07
YBX3-215ENST00000544504 CST2P09228 141 aa8.37□□□□□ -1.07
YBX3-215ENST00000544504 TACSTD2P09758 323 aa8.37□□□□□ -1.07
YBX3-215ENST00000544504 OR8G3PP0DMU2 310 aa8.37□□□□□ -1.07
YBX3-215ENST00000544504 GLI4P10075 376 aa8.37□□□□□ -1.07
YBX3-215ENST00000544504 GAAP10253 952 aa8.37□□□□□ -1.07
YBX3-215ENST00000544504 HOXB1P14653 301 aaPredicted RBP8.37□□□□□ -1.07
YBX3-215ENST00000544504 ATP6V1B1P15313 513 aa8.37□□□□□ -1.07
YBX3-215ENST00000544504 PAX7P23759 505 aa8.37□□□□□ -1.07
YBX3-215ENST00000544504 MPGP29372 298 aa8.37□□□□□ -1.07
YBX3-215ENST00000544504 TTKP33981 857 aa8.37□□□□□ -1.07
YBX3-215ENST00000544504 NTF4P34130 210 aa8.37□□□□□ -1.07
YBX3-215ENST00000544504 NAA10P41227 235 aaPredicted RBP8.37□□□□□ -1.07
YBX3-215ENST00000544504 CA7P43166 264 aa8.37□□□□□ -1.07
YBX3-215ENST00000544504 KIR2DL2P43627 348 aaPredicted RBP8.37□□□□□ -1.07
YBX3-215ENST00000544504 CDH15P55291 814 aa8.37□□□□□ -1.07
YBX3-215ENST00000544504 SIRPAP78324 504 aa8.37□□□□□ -1.07
YBX3-215ENST00000544504 GALEQ14376 348 aa8.37□□□□□ -1.07
YBX3-215ENST00000544504 IRF3Q14653 427 aa8.37□□□□□ -1.07
YBX3-215ENST00000544504 P2RY6Q15077 328 aa8.37□□□□□ -1.07
YBX3-215ENST00000544504 SGCAQ16586 387 aa8.37□□□□□ -1.07
YBX3-215ENST00000544504 PCK2Q16822 640 aa8.37□□□□□ -1.07
YBX3-215ENST00000544504 CEACAM16Q2WEN9 425 aa8.37□□□□□ -1.07
YBX3-215ENST00000544504 FAM27BQ5VT28 67 aa8.37□□□□□ -1.07
YBX3-215ENST00000544504 ZNF544Q6NX49 715 aa8.37□□□□□ -1.07
YBX3-215ENST00000544504 TFAP2EQ6VUC0 442 aa8.37□□□□□ -1.07
YBX3-215ENST00000544504 Q6ZT83 130 aa8.37□□□□□ -1.07
YBX3-215ENST00000544504 BEND4Q6ZU67 534 aa8.37□□□□□ -1.07
YBX3-215ENST00000544504 ZNF627Q7L945 461 aa8.37□□□□□ -1.07
YBX3-215ENST00000544504 FAM220AQ7Z4H9 259 aa8.37□□□□□ -1.07
YBX3-215ENST00000544504 CDC20BQ86Y33 519 aa8.37□□□□□ -1.07
YBX3-215ENST00000544504 GCNT2Q8N0V5 402 aa8.37□□□□□ -1.07
YBX3-215ENST00000544504 SPARTQ8N0X7 666 aa8.37□□□□□ -1.07
YBX3-215ENST00000544504 SYS1Q8N2H4 156 aa8.37□□□□□ -1.07
YBX3-215ENST00000544504 KLHL36Q8N4N3 616 aa8.37□□□□□ -1.07
YBX3-215ENST00000544504 ZNF511Q8NB15 262 aa8.37□□□□□ -1.07
YBX3-215ENST00000544504 C1orf162Q8NEQ5 155 aaPredicted RBP8.37□□□□□ -1.07
YBX3-215ENST00000544504 OR4F15Q8NGB8 312 aa8.37□□□□□ -1.07
YBX3-215ENST00000544504 OTOSQ8NHW6 89 aa8.37□□□□□ -1.07
YBX3-215ENST00000544504 C11orf40Q8WZ69 217 aa8.37□□□□□ -1.07
YBX3-215ENST00000544504 RORBQ92753 470 aa8.37□□□□□ -1.07
YBX3-215ENST00000544504 ALKBH3Q96Q83 286 aaPredicted RBP8.37□□□□□ -1.07
YBX3-215ENST00000544504 FOXB1Q99853 325 aa8.37□□□□□ -1.07
YBX3-215ENST00000544504 USB1Q9BQ65 265 aaKnown RBP8.37□□□□□ -1.07
YBX3-215ENST00000544504 C12orf49Q9H741 205 aa8.37□□□□□ -1.07
YBX3-215ENST00000544504 MOV10Q9HCE1 1003 aaKnown RBP8.37□□□□□ -1.07
YBX3-215ENST00000544504 TMEM38BQ9NVV0 291 aa8.37□□□□□ -1.07
YBX3-215ENST00000544504 PAK1IP1Q9NWT1 392 aaPredicted RBP8.37□□□□□ -1.07
YBX3-215ENST00000544504 ERVK13-1Q9NX77 482 aa8.37□□□□□ -1.07
YBX3-215ENST00000544504 CAB39Q9Y376 341 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms