RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 PCBD1P61457 104 aa16.53■□□□□ 0.24
DDX55-211ENST00000544429 HSF2Q03933 536 aa16.53■□□□□ 0.24
DDX55-211ENST00000544429 CRMP1Q14194 572 aa16.53■□□□□ 0.24
DDX55-211ENST00000544429 ACSM5Q6NUN0 579 aa16.53■□□□□ 0.24
DDX55-211ENST00000544429 SLC27A4Q6P1M0 643 aa16.53■□□□□ 0.24
DDX55-211ENST00000544429 LRRC75A-AS1Q8N1F1 130 aa16.53■□□□□ 0.24
DDX55-211ENST00000544429 IQCF1Q8N6M8 205 aa16.53■□□□□ 0.24
DDX55-211ENST00000544429 CYB561A3Q8NBI2 242 aa16.53■□□□□ 0.24
DDX55-211ENST00000544429 ZNRF4Q8WWF5 429 aa16.53■□□□□ 0.24
DDX55-211ENST00000544429 C11orf40Q8WZ69 217 aa16.53■□□□□ 0.24
DDX55-211ENST00000544429 FOXN4Q96NZ1 517 aa16.53■□□□□ 0.24
DDX55-211ENST00000544429 PKP2Q99959 881 aa16.53■□□□□ 0.24
DDX55-211ENST00000544429 KCNS3Q9BQ31 491 aa16.53■□□□□ 0.24
DDX55-211ENST00000544429 FN3KQ9H479 309 aa16.53■□□□□ 0.24
DDX55-211ENST00000544429 RNF121Q9H920 327 aa16.53■□□□□ 0.24
DDX55-211ENST00000544429 SLC25A19Q9HC21 320 aa16.53■□□□□ 0.24
DDX55-211ENST00000544429 SRA1Q9HD15 236 aaKnown RBP16.53■□□□□ 0.24
DDX55-211ENST00000544429 PAPOLBQ9NRJ5 636 aaKnown RBP16.53■□□□□ 0.24
DDX55-211ENST00000544429 FAIMQ9NVQ4 179 aa16.53■□□□□ 0.24
DDX55-211ENST00000544429 LAMP3Q9UQV4 416 aa16.53■□□□□ 0.24
DDX55-211ENST00000544429 TIMM10BQ9Y5J6 103 aa16.53■□□□□ 0.24
DDX55-211ENST00000544429 ATP23Q9Y6H3 246 aa16.53■□□□□ 0.24
DDX55-211ENST00000544429 H3BN98 237 aa16.52■□□□□ 0.24
DDX55-211ENST00000544429 ICMTO60725 284 aa16.52■□□□□ 0.24
DDX55-211ENST00000544429 GPANK1O95872 356 aa16.52■□□□□ 0.24
DDX55-211ENST00000544429 PTHP01270 115 aa16.52■□□□□ 0.24
DDX55-211ENST00000544429 TFP02787 698 aa16.52■□□□□ 0.24
DDX55-211ENST00000544429 HIST1H3AP68431 136 aa16.52■□□□□ 0.24
DDX55-211ENST00000544429 PPP2R2BQ00005 443 aa16.52■□□□□ 0.24
DDX55-211ENST00000544429 GLO1Q04760 184 aa16.52■□□□□ 0.24
DDX55-211ENST00000544429 AQP6Q13520 282 aa16.52■□□□□ 0.24
DDX55-211ENST00000544429 GINS1Q14691 196 aa16.52■□□□□ 0.24
DDX55-211ENST00000544429 MST1LQ2TV78 715 aa16.52■□□□□ 0.24
DDX55-211ENST00000544429 HIST2H3PS2Q5TEC6 136 aa16.52■□□□□ 0.24
DDX55-211ENST00000544429 HIST2H3AQ71DI3 136 aa16.52■□□□□ 0.24
DDX55-211ENST00000544429 KRTAP1-3Q8IUG1 177 aa16.52■□□□□ 0.24
DDX55-211ENST00000544429 C10orf67Q8IYJ2 551 aa16.52■□□□□ 0.24
DDX55-211ENST00000544429 MUC15Q8N387 334 aa16.52■□□□□ 0.24
DDX55-211ENST00000544429 PAQR4Q8N4S7 273 aaPredicted RBP16.52■□□□□ 0.24
DDX55-211ENST00000544429 SLC30A7Q8NEW0 376 aa16.52■□□□□ 0.24
DDX55-211ENST00000544429 TMEM171Q8WVE6 324 aa16.52■□□□□ 0.24
DDX55-211ENST00000544429 POM121L2Q96KW2 1035 aa16.52■□□□□ 0.24
DDX55-211ENST00000544429 GSX2Q9BZM3 304 aa16.52■□□□□ 0.24
DDX55-211ENST00000544429 CCNB1IP1Q9NPC3 277 aa16.52■□□□□ 0.24
DDX55-211ENST00000544429 TMEFF2Q9UIK5 374 aaPredicted RBP16.52■□□□□ 0.24
DDX55-211ENST00000544429 OAZ3Q9UMX2 235 aa16.52■□□□□ 0.24
DDX55-211ENST00000544429 VPS13CQ709C8 3753 aa16.51■□□□□ 0.23
DDX55-211ENST00000544429 LOC100509620A0A075B734 347 aa16.51■□□□□ 0.23
DDX55-211ENST00000544429 ZNF23P17027 643 aa16.51■□□□□ 0.23
DDX55-211ENST00000544429 APEX1P27695 318 aaKnown RBP16.51■□□□□ 0.23
DDX55-211ENST00000544429 ART1P52961 327 aa16.51■□□□□ 0.23
DDX55-211ENST00000544429 PLP2Q04941 152 aa16.51■□□□□ 0.23
DDX55-211ENST00000544429 ADIPOQQ15848 244 aa16.51■□□□□ 0.23
DDX55-211ENST00000544429 ZSCAN26Q16670 478 aa16.51■□□□□ 0.23
DDX55-211ENST00000544429 SWI5Q1ZZU3 235 aa16.51■□□□□ 0.23
DDX55-211ENST00000544429 AGAP6Q5VW22 663 aa16.51■□□□□ 0.23
DDX55-211ENST00000544429 SPNS3Q6ZMD2 512 aa16.51■□□□□ 0.23
DDX55-211ENST00000544429 OR2T4Q8NH00 348 aa16.51■□□□□ 0.23
DDX55-211ENST00000544429 AKR7LQ8NHP1 331 aa16.51■□□□□ 0.23
DDX55-211ENST00000544429 SEMA6AQ9H2E6 1030 aa16.51■□□□□ 0.23
DDX55-211ENST00000544429 RERGLQ9H628 205 aa16.51■□□□□ 0.23
DDX55-211ENST00000544429 CBLN4Q9NTU7 201 aa16.51■□□□□ 0.23
DDX55-211ENST00000544429 MRPL22Q9NWU5 206 aaKnown RBP16.51■□□□□ 0.23
DDX55-211ENST00000544429 LHFPL6Q9Y693 200 aa16.51■□□□□ 0.23
DDX55-211ENST00000544429 MAP1AP78559 2803 aaPredicted RBP16.5■□□□□ 0.23
DDX55-211ENST00000544429 IQCMA0A1B0GVH7 501 aa16.5■□□□□ 0.23
DDX55-211ENST00000544429 SURF4O15260 269 aa16.5■□□□□ 0.23
DDX55-211ENST00000544429 IFNGP01579 166 aa16.5■□□□□ 0.23
DDX55-211ENST00000544429 COX5BP10606 129 aa16.5■□□□□ 0.23
DDX55-211ENST00000544429 STOMP27105 288 aa16.5■□□□□ 0.23
DDX55-211ENST00000544429 PCSK6P29122 969 aa16.5■□□□□ 0.23
DDX55-211ENST00000544429 THBS4P35443 961 aa16.5■□□□□ 0.23
DDX55-211ENST00000544429 GGT2P36268 569 aa16.5■□□□□ 0.23
DDX55-211ENST00000544429 FABP6P51161 128 aa16.5■□□□□ 0.23
DDX55-211ENST00000544429 CRISP1P54107 249 aa16.5■□□□□ 0.23
DDX55-211ENST00000544429 ESRRGP62508 458 aa16.5■□□□□ 0.23
DDX55-211ENST00000544429 SCRN3Q0VDG4 424 aa16.5■□□□□ 0.23
DDX55-211ENST00000544429 EFNB3Q15768 340 aa16.5■□□□□ 0.23
DDX55-211ENST00000544429 MEP1BQ16820 701 aa16.5■□□□□ 0.23
DDX55-211ENST00000544429 MSMPQ1L6U9 139 aa16.5■□□□□ 0.23
DDX55-211ENST00000544429 LINC01590Q5TEZ4 76 aa16.5■□□□□ 0.23
DDX55-211ENST00000544429 OTPQ5XKR4 325 aa16.5■□□□□ 0.23
DDX55-211ENST00000544429 FBXL14Q8N1E6 418 aa16.5■□□□□ 0.23
DDX55-211ENST00000544429 PTP4A1Q93096 173 aa16.5■□□□□ 0.23
DDX55-211ENST00000544429 OSBPL10Q9BXB5 764 aa16.5■□□□□ 0.23
DDX55-211ENST00000544429 CXorf56Q9H5V9 222 aa16.5■□□□□ 0.23
DDX55-211ENST00000544429 S100A14Q9HCY8 104 aa16.5■□□□□ 0.23
DDX55-211ENST00000544429 KIF17Q9P2E2 1029 aa16.5■□□□□ 0.23
DDX55-211ENST00000544429 ASH2LQ9UBL3 628 aa16.5■□□□□ 0.23
DDX55-211ENST00000544429 ZNF469Q96JG9 3925 aaPredicted RBP16.5■□□□□ 0.23
DDX55-211ENST00000544429 ITPR3Q14573 2671 aa16.5■□□□□ 0.23
DDX55-211ENST00000544429 RIIAD1A6NNX1 92 aa16.49■□□□□ 0.23
DDX55-211ENST00000544429 SYNGR3O43761 229 aa16.49■□□□□ 0.23
DDX55-211ENST00000544429 MITFO75030 526 aaPredicted RBP16.49■□□□□ 0.23
DDX55-211ENST00000544429 CCL2P13500 99 aa16.49■□□□□ 0.23
DDX55-211ENST00000544429 ZNF3P17036 446 aa16.49■□□□□ 0.23
DDX55-211ENST00000544429 SPI1P17947 270 aa16.49■□□□□ 0.23
DDX55-211ENST00000544429 POU1F1P28069 291 aa16.49■□□□□ 0.23
DDX55-211ENST00000544429 EPHA2P29317 976 aa16.49■□□□□ 0.23
DDX55-211ENST00000544429 GLRXP35754 106 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms