RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 GDPGP1Q6ZNW5 385 aa26.86■■□□□ 1.89
CCM2-219ENST00000544363 LINGO2Q7L985 606 aa26.86■■□□□ 1.89
CCM2-219ENST00000544363 ZNF679Q8IYX0 411 aa26.86■■□□□ 1.89
CCM2-219ENST00000544363 ALDH16A1Q8IZ83 802 aa26.86■■□□□ 1.89
CCM2-219ENST00000544363 HAVCR2Q8TDQ0 301 aa26.86■■□□□ 1.89
CCM2-219ENST00000544363 TMEM203Q969S6 136 aa26.86■■□□□ 1.89
CCM2-219ENST00000544363 ALKBH3Q96Q83 286 aaPredicted RBP26.86■■□□□ 1.89
CCM2-219ENST00000544363 PTTG2Q9NZH5 202 aa26.86■■□□□ 1.89
CCM2-219ENST00000544363 POLR1DQ9Y2S0 133 aa26.86■■□□□ 1.89
CCM2-219ENST00000544363 PHF3Q92576 2039 aaKnown RBP26.85■■□□□ 1.89
CCM2-219ENST00000544363 A0A1W2PPW3 197 aa26.85■■□□□ 1.89
CCM2-219ENST00000544363 TMEM8BA6NDV4 472 aa26.85■■□□□ 1.89
CCM2-219ENST00000544363 HSPB2A8KAH6 182 aa26.85■■□□□ 1.89
CCM2-219ENST00000544363 PCSK6P29122 969 aa26.85■■□□□ 1.89
CCM2-219ENST00000544363 PSMB10P40306 273 aa26.85■■□□□ 1.89
CCM2-219ENST00000544363 TGM4P49221 684 aa26.85■■□□□ 1.89
CCM2-219ENST00000544363 HSPB2Q16082 182 aa26.85■■□□□ 1.89
CCM2-219ENST00000544363 TSPO2Q5TGU0 170 aa26.85■■□□□ 1.89
CCM2-219ENST00000544363 LIPNQ5VXI9 398 aa26.85■■□□□ 1.89
CCM2-219ENST00000544363 RPL22L1Q6P5R6 122 aaKnown RBP26.85■■□□□ 1.89
CCM2-219ENST00000544363 CORO6Q6QEF8 472 aa26.85■■□□□ 1.89
CCM2-219ENST00000544363 ARL9Q6T311 187 aa26.85■■□□□ 1.89
CCM2-219ENST00000544363 LRRN1Q6UXK5 716 aa26.85■■□□□ 1.89
CCM2-219ENST00000544363 HTRA1Q92743 480 aa26.85■■□□□ 1.89
CCM2-219ENST00000544363 NABP1Q96AH0 204 aa26.85■■□□□ 1.89
CCM2-219ENST00000544363 MROQ9BYG7 248 aa26.85■■□□□ 1.89
CCM2-219ENST00000544363 ELOVL3Q9HB03 270 aa26.85■■□□□ 1.89
CCM2-219ENST00000544363 GPR35Q9HC97 309 aa26.85■■□□□ 1.89
CCM2-219ENST00000544363 GLRX2Q9NS18 164 aa26.85■■□□□ 1.89
CCM2-219ENST00000544363 LHFPL6Q9Y693 200 aa26.85■■□□□ 1.89
CCM2-219ENST00000544363 CD53P19397 219 aa26.84■■□□□ 1.89
CCM2-219ENST00000544363 EDNRAP25101 427 aa26.84■■□□□ 1.89
CCM2-219ENST00000544363 MRPS34P82930 218 aaKnown RBP26.84■■□□□ 1.89
CCM2-219ENST00000544363 NFATC3Q12968 1075 aa26.84■■□□□ 1.89
CCM2-219ENST00000544363 CDK5R1Q15078 307 aa26.84■■□□□ 1.89
CCM2-219ENST00000544363 SOWAHCQ53LP3 525 aaPredicted RBP26.84■■□□□ 1.89
CCM2-219ENST00000544363 KRT77Q7Z794 578 aa26.84■■□□□ 1.89
CCM2-219ENST00000544363 GMPPAQ96IJ6 420 aaPredicted RBP26.84■■□□□ 1.89
CCM2-219ENST00000544363 CENPOQ9BU64 300 aa26.84■■□□□ 1.89
CCM2-219ENST00000544363 EXOSC4Q9NPD3 245 aaKnown RBP26.84■■□□□ 1.89
CCM2-219ENST00000544363 SSR3Q9UNL2 185 aa26.84■■□□□ 1.89
CCM2-219ENST00000544363 AGTR1P30556 359 aa26.83■■□□□ 1.89
CCM2-219ENST00000544363 HOXD11P31277 338 aaPredicted RBP26.83■■□□□ 1.89
CCM2-219ENST00000544363 NUFIP2Q7Z417 695 aaKnown RBP26.83■■□□□ 1.89
CCM2-219ENST00000544363 OR2AJ1Q8NGZ0 328 aa26.83■■□□□ 1.89
CCM2-219ENST00000544363 RNF166Q96A37 237 aaPredicted RBP26.83■■□□□ 1.89
CCM2-219ENST00000544363 APH1AQ96BI3 265 aa26.83■■□□□ 1.89
CCM2-219ENST00000544363 TM9SF2Q99805 663 aa26.83■■□□□ 1.89
CCM2-219ENST00000544363 TMED9Q9BVK6 235 aa26.83■■□□□ 1.89
CCM2-219ENST00000544363 C1orf198Q9H425 327 aa26.83■■□□□ 1.89
CCM2-219ENST00000544363 KRT33AO76009 404 aa26.83■■□□□ 1.88
CCM2-219ENST00000544363 RPP14O95059 124 aaKnown RBP26.83■■□□□ 1.88
CCM2-219ENST00000544363 ACSF3Q4G176 576 aaPredicted RBP26.83■■□□□ 1.88
CCM2-219ENST00000544363 CISD2Q8N5K1 135 aaKnown RBP26.83■■□□□ 1.88
CCM2-219ENST00000544363 WNT2BQ93097 391 aa26.83■■□□□ 1.88
CCM2-219ENST00000544363 MAP6Q96JE9 813 aa26.83■■□□□ 1.88
CCM2-219ENST00000544363 ZNF416Q9BWM5 594 aa26.83■■□□□ 1.88
CCM2-219ENST00000544363 SLC7A10Q9NS82 523 aa26.83■■□□□ 1.88
CCM2-219ENST00000544363 GDF2Q9UK05 429 aaPredicted RBP26.83■■□□□ 1.88
CCM2-219ENST00000544363 SS18L1O75177 396 aaPredicted RBP26.82■■□□□ 1.88
CCM2-219ENST00000544363 WNT11O96014 354 aa26.82■■□□□ 1.88
CCM2-219ENST00000544363 NPR2P20594 1047 aa26.82■■□□□ 1.88
CCM2-219ENST00000544363 TGFBR1P36897 503 aa26.82■■□□□ 1.88
CCM2-219ENST00000544363 ROR2Q01974 943 aaKnown RBP26.82■■□□□ 1.88
CCM2-219ENST00000544363 SLC3A1Q07837 685 aa26.82■■□□□ 1.88
CCM2-219ENST00000544363 CEACAM16Q2WEN9 425 aa26.82■■□□□ 1.88
CCM2-219ENST00000544363 CD200R1LQ6Q8B3 271 aa26.82■■□□□ 1.88
CCM2-219ENST00000544363 SPATC1Q76KD6 591 aa26.82■■□□□ 1.88
CCM2-219ENST00000544363 RNF133Q8WVZ7 376 aa26.82■■□□□ 1.88
CCM2-219ENST00000544363 SMIM19Q96E16 107 aa26.82■■□□□ 1.88
CCM2-219ENST00000544363 TRMT61AQ96FX7 289 aaKnown RBP26.82■■□□□ 1.88
CCM2-219ENST00000544363 DCUN1D5Q9BTE7 237 aa26.82■■□□□ 1.88
CCM2-219ENST00000544363 TMEM38BQ9NVV0 291 aa26.82■■□□□ 1.88
CCM2-219ENST00000544363 ASH2LQ9UBL3 628 aa26.82■■□□□ 1.88
CCM2-219ENST00000544363 IGHV3-9P01782 118 aa26.81■■□□□ 1.88
CCM2-219ENST00000544363 HLA-DPB1P04440 258 aa26.81■■□□□ 1.88
CCM2-219ENST00000544363 CD1AP06126 327 aa26.81■■□□□ 1.88
CCM2-219ENST00000544363 SF3B4Q15427 424 aaKnown RBP eCLIP26.81■■□□□ 1.88
CCM2-219ENST00000544363 ZNF585AQ6P3V2 769 aa26.81■■□□□ 1.88
CCM2-219ENST00000544363 DEGS2Q6QHC5 323 aa26.81■■□□□ 1.88
CCM2-219ENST00000544363 ZNF100Q8IYN0 542 aa26.81■■□□□ 1.88
CCM2-219ENST00000544363 NDNFQ8TB73 568 aa26.81■■□□□ 1.88
CCM2-219ENST00000544363 RPS4Y2Q8TD47 263 aa26.81■■□□□ 1.88
CCM2-219ENST00000544363 PGLYRP3Q96LB9 341 aa26.81■■□□□ 1.88
CCM2-219ENST00000544363 PRORYQ9H606 182 aa26.81■■□□□ 1.88
CCM2-219ENST00000544363 RNF167Q9H6Y7 350 aa26.81■■□□□ 1.88
CCM2-219ENST00000544363 TRBV2A0A0J9YWF9 115 aa26.8■■□□□ 1.88
CCM2-219ENST00000544363 TRDV1A0A1B0GX56 115 aa26.8■■□□□ 1.88
CCM2-219ENST00000544363 ZNF254O75437 659 aa26.8■■□□□ 1.88
CCM2-219ENST00000544363 RIDAP52758 137 aaKnown RBP26.8■■□□□ 1.88
CCM2-219ENST00000544363 FABP5Q01469 135 aa26.8■■□□□ 1.88
CCM2-219ENST00000544363 ENDOGQ14249 297 aaKnown RBP26.8■■□□□ 1.88
CCM2-219ENST00000544363 STK11Q15831 433 aa26.8■■□□□ 1.88
CCM2-219ENST00000544363 FAM27BQ5VT28 67 aa26.8■■□□□ 1.88
CCM2-219ENST00000544363 SLAMF6Q96DU3 332 aa26.8■■□□□ 1.88
CCM2-219ENST00000544363 SIAEQ9HAT2 523 aa26.8■■□□□ 1.88
CCM2-219ENST00000544363 LRP12Q9Y561 859 aa26.8■■□□□ 1.88
CCM2-219ENST00000544363 CACNA1CQ13936 2221 aa26.8■■□□□ 1.88
CCM2-219ENST00000544363 RPL36A-HNRNPH2H7BZ11 118 aa26.79■■□□□ 1.88
CCM2-219ENST00000544363 GDI2P50395 445 aaKnown RBP26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms