RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 SLCO1C1Q9NYB5 712 aa11.19□□□□□ -0.62
TNFRSF1A-215ENST00000543359 VSX1Q9NZR4 365 aaPredicted RBP11.19□□□□□ -0.62
TNFRSF1A-215ENST00000543359 GRHPRQ9UBQ7 328 aa11.19□□□□□ -0.62
TNFRSF1A-215ENST00000543359 IL20RAQ9UHF4 553 aa11.19□□□□□ -0.62
TNFRSF1A-215ENST00000543359 TAGLN3Q9UI15 199 aa11.19□□□□□ -0.62
TNFRSF1A-215ENST00000543359 ARL2BPQ9Y2Y0 163 aa11.19□□□□□ -0.62
TNFRSF1A-215ENST00000543359 FAM32AQ9Y421 112 aaKnown RBP11.19□□□□□ -0.62
TNFRSF1A-215ENST00000543359 TENM1Q9UKZ4 2725 aa11.19□□□□□ -0.62
TNFRSF1A-215ENST00000543359 A0A1W2PPW3 197 aa11.18□□□□□ -0.62
TNFRSF1A-215ENST00000543359 WNT9BO14905 357 aa11.18□□□□□ -0.62
TNFRSF1A-215ENST00000543359 NDUFB2O95178 105 aa11.18□□□□□ -0.62
TNFRSF1A-215ENST00000543359 TGFAP01135 160 aa11.18□□□□□ -0.62
TNFRSF1A-215ENST00000543359 NGFP01138 241 aa11.18□□□□□ -0.62
TNFRSF1A-215ENST00000543359 MSR1P21757 451 aa11.18□□□□□ -0.62
TNFRSF1A-215ENST00000543359 ACHEP22303 614 aa11.18□□□□□ -0.62
TNFRSF1A-215ENST00000543359 CCNOP22674 350 aa11.18□□□□□ -0.62
TNFRSF1A-215ENST00000543359 SDHAP31040 664 aa11.18□□□□□ -0.62
TNFRSF1A-215ENST00000543359 RPL4P36578 427 aaKnown RBP11.18□□□□□ -0.62
TNFRSF1A-215ENST00000543359 MPV17P39210 176 aa11.18□□□□□ -0.62
TNFRSF1A-215ENST00000543359 GDI2P50395 445 aaKnown RBP11.18□□□□□ -0.62
TNFRSF1A-215ENST00000543359 TMEM33P57088 247 aa11.18□□□□□ -0.62
TNFRSF1A-215ENST00000543359 PCBD1P61457 104 aa11.18□□□□□ -0.62
TNFRSF1A-215ENST00000543359 FGD3Q5JSP0 725 aa11.18□□□□□ -0.62
TNFRSF1A-215ENST00000543359 SAMD4BQ5PRF9 694 aaKnown RBP11.18□□□□□ -0.62
TNFRSF1A-215ENST00000543359 FAM120AOSQ5T036 256 aa11.18□□□□□ -0.62
TNFRSF1A-215ENST00000543359 MBNL2Q5VZF2 373 aaKnown RBP11.18□□□□□ -0.62
TNFRSF1A-215ENST00000543359 FAM166AQ6J272 317 aa11.18□□□□□ -0.62
TNFRSF1A-215ENST00000543359 PTCHD4Q6ZW05 846 aa11.18□□□□□ -0.62
TNFRSF1A-215ENST00000543359 RFPL4BQ6ZWI9 263 aa11.18□□□□□ -0.62
TNFRSF1A-215ENST00000543359 CXXC5Q7LFL8 322 aaKnown RBP11.18□□□□□ -0.62
TNFRSF1A-215ENST00000543359 RRM2BQ7LG56 351 aa11.18□□□□□ -0.62
TNFRSF1A-215ENST00000543359 OR1J1Q8NGS3 322 aa11.18□□□□□ -0.62
TNFRSF1A-215ENST00000543359 RSRC1Q96IZ7 334 aaKnown RBP11.18□□□□□ -0.62
TNFRSF1A-215ENST00000543359 ZNF570Q96NI8 536 aa11.18□□□□□ -0.62
TNFRSF1A-215ENST00000543359 LRRC37BQ96QE4 947 aa11.18□□□□□ -0.62
TNFRSF1A-215ENST00000543359 SNX18Q96RF0 628 aa11.18□□□□□ -0.62
TNFRSF1A-215ENST00000543359 BEX2Q9BXY8 128 aa11.18□□□□□ -0.62
TNFRSF1A-215ENST00000543359 NKIRAS2Q9NYR9 191 aa11.18□□□□□ -0.62
TNFRSF1A-215ENST00000543359 MAGEL2Q9UJ55 1249 aa11.18□□□□□ -0.62
TNFRSF1A-215ENST00000543359 KLHL21Q9UJP4 597 aa11.18□□□□□ -0.62
TNFRSF1A-215ENST00000543359 TEX13CA0A0J9YWL9 993 aa11.17□□□□□ -0.62
TNFRSF1A-215ENST00000543359 A0A1W2PPL8 197 aa11.17□□□□□ -0.62
TNFRSF1A-215ENST00000543359 UNC119BA6NIH7 251 aa11.17□□□□□ -0.62
TNFRSF1A-215ENST00000543359 ARPC2O15144 300 aa11.17□□□□□ -0.62
TNFRSF1A-215ENST00000543359 CDKN2AP42771 156 aaKnown RBP11.17□□□□□ -0.62
TNFRSF1A-215ENST00000543359 MMP15P51511 669 aa11.17□□□□□ -0.62
TNFRSF1A-215ENST00000543359 CDH15P55291 814 aa11.17□□□□□ -0.62
TNFRSF1A-215ENST00000543359 SELENOVP59797 346 aa11.17□□□□□ -0.62
TNFRSF1A-215ENST00000543359 KRR1Q13601 381 aaKnown RBP11.17□□□□□ -0.62
TNFRSF1A-215ENST00000543359 KRT72Q14CN4 511 aa11.17□□□□□ -0.62
TNFRSF1A-215ENST00000543359 NKPD1Q17RQ9 610 aa11.17□□□□□ -0.62
TNFRSF1A-215ENST00000543359 PCGF3Q3KNV8 242 aa11.17□□□□□ -0.62
TNFRSF1A-215ENST00000543359 SPATA46Q5T0L3 261 aa11.17□□□□□ -0.62
TNFRSF1A-215ENST00000543359 OTPQ5XKR4 325 aa11.17□□□□□ -0.62
TNFRSF1A-215ENST00000543359 GPR139Q6DWJ6 353 aa11.17□□□□□ -0.62
TNFRSF1A-215ENST00000543359 DPY19L2P2Q6ZN68 376 aa11.17□□□□□ -0.62
TNFRSF1A-215ENST00000543359 ALDH16A1Q8IZ83 802 aa11.17□□□□□ -0.62
TNFRSF1A-215ENST00000543359 FITM2Q8N6M3 262 aa11.17□□□□□ -0.62
TNFRSF1A-215ENST00000543359 SLC25A40Q8TBP6 338 aa11.17□□□□□ -0.62
TNFRSF1A-215ENST00000543359 KLF14Q8TD94 323 aaPredicted RBP11.17□□□□□ -0.62
TNFRSF1A-215ENST00000543359 IPCEF1Q8WWN9 437 aaPredicted RBP11.17□□□□□ -0.62
TNFRSF1A-215ENST00000543359 WACQ9BTA9 647 aa11.17□□□□□ -0.62
TNFRSF1A-215ENST00000543359 OR2J1Q9GZK6 312 aa11.17□□□□□ -0.62
TNFRSF1A-215ENST00000543359 SYT4Q9H2B2 425 aa11.17□□□□□ -0.62
TNFRSF1A-215ENST00000543359 IL1RAPQ9NPH3 570 aa11.17□□□□□ -0.62
TNFRSF1A-215ENST00000543359 ZNF275Q9NSD4 429 aaPredicted RBP11.17□□□□□ -0.62
TNFRSF1A-215ENST00000543359 LPAR3Q9UBY5 353 aa11.17□□□□□ -0.62
TNFRSF1A-215ENST00000543359 KCNS2Q9ULS6 477 aa11.17□□□□□ -0.62
TNFRSF1A-215ENST00000543359 IER3IP1Q9Y5U9 82 aa11.17□□□□□ -0.62
TNFRSF1A-215ENST00000543359 V9GYQ6 96 aa11.17□□□□□ -0.62
TNFRSF1A-215ENST00000543359 C12orf71A8MTZ7 269 aa11.16□□□□□ -0.62
TNFRSF1A-215ENST00000543359 DCTN6O00399 190 aa11.16□□□□□ -0.62
TNFRSF1A-215ENST00000543359 XKRYO14609 159 aa11.16□□□□□ -0.62
TNFRSF1A-215ENST00000543359 GMNNO75496 209 aa11.16□□□□□ -0.62
TNFRSF1A-215ENST00000543359 MPZL1O95297 269 aa11.16□□□□□ -0.62
TNFRSF1A-215ENST00000543359 COX5BP10606 129 aa11.16□□□□□ -0.62
TNFRSF1A-215ENST00000543359 ITGA2P17301 1181 aa11.16□□□□□ -0.62
TNFRSF1A-215ENST00000543359 THBS2P35442 1172 aa11.16□□□□□ -0.62
TNFRSF1A-215ENST00000543359 GUCA1AP43080 201 aaPredicted RBP11.16□□□□□ -0.62
TNFRSF1A-215ENST00000543359 CRYBB2P43320 205 aa11.16□□□□□ -0.62
TNFRSF1A-215ENST00000543359 LMO4P61968 165 aa11.16□□□□□ -0.62
TNFRSF1A-215ENST00000543359 CCL8P80075 99 aa11.16□□□□□ -0.62
TNFRSF1A-215ENST00000543359 KCNMB1Q16558 191 aa11.16□□□□□ -0.62
TNFRSF1A-215ENST00000543359 RFX4Q33E94 735 aa11.16□□□□□ -0.62
TNFRSF1A-215ENST00000543359 ZNF718Q3SXZ3 478 aa11.16□□□□□ -0.62
TNFRSF1A-215ENST00000543359 SPATS1Q496A3 300 aa11.16□□□□□ -0.62
TNFRSF1A-215ENST00000543359 IL17RELQ6ZVW7 336 aa11.16□□□□□ -0.62
TNFRSF1A-215ENST00000543359 VASH1Q7L8A9 365 aaPredicted RBP11.16□□□□□ -0.62
TNFRSF1A-215ENST00000543359 C1orf174Q8IYL3 243 aa11.16□□□□□ -0.62
TNFRSF1A-215ENST00000543359 DEFB107AQ8IZN7 70 aa11.16□□□□□ -0.62
TNFRSF1A-215ENST00000543359 LINC01356Q8N9X3 169 aa11.16□□□□□ -0.62
TNFRSF1A-215ENST00000543359 CLDND2Q8NHS1 167 aa11.16□□□□□ -0.62
TNFRSF1A-215ENST00000543359 SPATA3Q8NHX4 192 aa11.16□□□□□ -0.62
TNFRSF1A-215ENST00000543359 C4orf45Q96LM5 186 aa11.16□□□□□ -0.62
TNFRSF1A-215ENST00000543359 NSMCE2Q96MF7 247 aa11.16□□□□□ -0.62
TNFRSF1A-215ENST00000543359 CCT8L2Q96SF2 557 aa11.16□□□□□ -0.62
TNFRSF1A-215ENST00000543359 NUAK2Q9H093 628 aa11.16□□□□□ -0.62
TNFRSF1A-215ENST00000543359 SHARPINQ9H0F6 387 aa11.16□□□□□ -0.62
TNFRSF1A-215ENST00000543359 POFUT1Q9H488 388 aa11.16□□□□□ -0.62
TNFRSF1A-215ENST00000543359 EIF3KQ9UBQ5 218 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms