RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, human

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-223	ENST00000542838	PCP4L1	A6NKN8	68 aa		11.64	□□□□□ -0.55
DDX11-223	ENST00000542838	TTLL8	A6PVC2	850 aa		11.64	□□□□□ -0.55
DDX11-223	ENST00000542838	UTS2	O95399	124 aa		11.64	□□□□□ -0.55
DDX11-223	ENST00000542838	SLC25A4	P12235	298 aa		11.64	□□□□□ -0.55
DDX11-223	ENST00000542838	MFGE8	Q08431	387 aa	Predicted RBP	11.64	□□□□□ -0.55
DDX11-223	ENST00000542838	NKPD1	Q17RQ9	610 aa		11.64	□□□□□ -0.55
DDX11-223	ENST00000542838	SLC18B1	Q6NT16	456 aa		11.64	□□□□□ -0.55
DDX11-223	ENST00000542838	LPCAT3	Q6P1A2	487 aa		11.64	□□□□□ -0.55
DDX11-223	ENST00000542838		Q6ZSR6	202 aa		11.64	□□□□□ -0.55
DDX11-223	ENST00000542838	ZSCAN1	Q8NBB4	408 aa		11.64	□□□□□ -0.55
DDX11-223	ENST00000542838	METTL21A	Q8WXB1	218 aa		11.64	□□□□□ -0.55
DDX11-223	ENST00000542838	ASB17	Q8WXJ9	295 aa		11.64	□□□□□ -0.55
DDX11-223	ENST00000542838	FGF14	Q92915	247 aa		11.64	□□□□□ -0.55
DDX11-223	ENST00000542838	SLC25A44	Q96H78	314 aa	Predicted RBP	11.64	□□□□□ -0.55
DDX11-223	ENST00000542838	SLC6A7	Q99884	636 aa		11.64	□□□□□ -0.55
DDX11-223	ENST00000542838	SLCO5A1	Q9H2Y9	848 aa		11.64	□□□□□ -0.55
DDX11-223	ENST00000542838		A0A1W2PPC1	479 aa		11.64	□□□□□ -0.55
DDX11-223	ENST00000542838	TNF	P01375	233 aa		11.64	□□□□□ -0.55
DDX11-223	ENST00000542838	GP1BA	P07359	652 aa		11.64	□□□□□ -0.55
DDX11-223	ENST00000542838	PMPCA	Q10713	525 aa		11.64	□□□□□ -0.55
DDX11-223	ENST00000542838	BIK	Q13323	160 aa		11.64	□□□□□ -0.55
DDX11-223	ENST00000542838	TEX30	Q5JUR7	227 aa		11.64	□□□□□ -0.55
DDX11-223	ENST00000542838	OR10K2	Q6IF99	312 aa		11.64	□□□□□ -0.55
DDX11-223	ENST00000542838	C19orf47	Q8N9M1	422 aa	Known RBP	11.64	□□□□□ -0.55
DDX11-223	ENST00000542838	OR13C8	Q8NGS7	320 aa		11.64	□□□□□ -0.55
DDX11-223	ENST00000542838	PPP1R1C	Q8WVI7	109 aa		11.64	□□□□□ -0.55
DDX11-223	ENST00000542838	SLC25A36	Q96CQ1	311 aa		11.64	□□□□□ -0.55
DDX11-223	ENST00000542838	HPF1	Q9NWY4	346 aa		11.64	□□□□□ -0.55
DDX11-223	ENST00000542838	LOC100509620	A0A075B734	347 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	RNF222	A6NCQ9	220 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	FAM25E	A8MYX2	175 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	DOK2	O60496	412 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	SLC16A7	O60669	478 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	CLPS	P04118	112 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	CXCR1	P25024	350 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	RIDA	P52758	137 aa	Known RBP	11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	ATP1B3	P54709	279 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	SKP1	P63208	163 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	PRTG	Q2VWP7	1150 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	MOGAT2	Q3SYC2	334 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	C1QL3	Q5VWW1	255 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	MDGA2	Q7Z553	956 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	ADGRE4P	Q86SQ3	457 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	CD163	Q86VB7	1156 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	CCDC36	Q8IYA8	594 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	JAGN1	Q8N5M9	183 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	OR4S1	Q8NGB4	309 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	OR5T2	Q8NGG2	359 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	OR51A2	Q8NGJ7	313 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	EDEM2	Q9BV94	578 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	CERS4	Q9HA82	394 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	KLK13	Q9UKR3	277 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	PLEKHA6	Q9Y2H5	1048 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	KIAA0100	Q14667	2235 aa	Known RBP	11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	F5	P12259	2224 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	FITM1	A5D6W6	292 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	TMEM235	A6NFC5	223 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	CD74	P04233	296 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	CAPZA1	P52907	286 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	PPIA	P62937	165 aa	Known RBP	11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	SRSF4	Q08170	494 aa	Known RBP	11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	SPOCK1	Q08629	439 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	SNTB1	Q13884	538 aa	Known RBP	11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	KIF26B	Q2KJY2	2108 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	PRAMEF17	Q5VTA0	474 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	C3orf33	Q6P1S2	294 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	ACOT7L	Q6ZUV0	252 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	ZNF584	Q8IVC4	421 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	LINC00518	Q8N0U6	118 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	FRMD1	Q8N878	549 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	GPBAR1	Q8TDU6	330 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	MMAB	Q96EY8	250 aa	Predicted RBP	11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	ZNF587	Q96SQ5	575 aa	Predicted RBP	11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	SAV1	Q9H4B6	383 aa	Predicted RBP	11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	IGFLR1	Q9H665	355 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	PRMT8	Q9NR22	394 aa	Predicted RBP	11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	MRPL22	Q9NWU5	206 aa	Known RBP	11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	VSIG4	Q9Y279	399 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	PRELID3B	Q9Y3B1	194 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	ARID1B	Q8NFD5	2236 aa	Predicted RBP	11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	OR14I1	A6ND48	311 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	TMEM200C	A6NKL6	621 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	C17orf105	B2RV13	164 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	DISC1	C4P0D8	188 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	ABCD4	O14678	606 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	IL33	O95760	270 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	BGLAP	P02818	100 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	DNASE1L1	P49184	302 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	ADAM8	P78325	824 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	EIF2B1	Q14232	305 aa	Known RBP	11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	PAN3	Q58A45	887 aa	Known RBP	11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	KCTD18	Q6PI47	426 aa	Predicted RBP	11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	PAPD4	Q6PIY7	484 aa	Known RBP	11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	PRR22	Q8IZ63	422 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	FAM160A2	Q8N612	972 aa	Predicted RBP	11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	ZNF321P	Q8N8H1	164 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	OR13H1	Q8NG92	308 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	NKD1	Q969G9	470 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	PHYHIPL	Q96FC7	376 aa		11.63	□□□□□ -0.55
DDX11-223	ENST00000542838	NXF5	Q9H1B4	397 aa	Known RBP	11.63	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms