RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, human

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC2-223	ENST00000542552	GLB1L2	Q8IW92	636 aa		13.28	□□□□□ -0.28
ECHDC2-223	ENST00000542552	ZCCHC24	Q8N2G6	241 aa	Known RBP	13.28	□□□□□ -0.28
ECHDC2-223	ENST00000542552	AKR7L	Q8NHP1	331 aa		13.28	□□□□□ -0.28
ECHDC2-223	ENST00000542552	C10orf105	Q8TEF2	133 aa		13.28	□□□□□ -0.28
ECHDC2-223	ENST00000542552	VRK1	Q99986	396 aa	Predicted RBP	13.28	□□□□□ -0.28
ECHDC2-223	ENST00000542552	LRMDA	Q9H2I8	198 aa		13.28	□□□□□ -0.28
ECHDC2-223	ENST00000542552	EMC7	Q9NPA0	242 aa		13.28	□□□□□ -0.28
ECHDC2-223	ENST00000542552	IL20	Q9NYY1	176 aa		13.28	□□□□□ -0.28
ECHDC2-223	ENST00000542552	FN1	P02751	2386 aa	Known RBP	13.27	□□□□□ -0.29
ECHDC2-223	ENST00000542552	IGLV1-36	A0A0B4J1U3	117 aa		13.27	□□□□□ -0.29
ECHDC2-223	ENST00000542552	DCTN6	O00399	190 aa		13.27	□□□□□ -0.29
ECHDC2-223	ENST00000542552	SYNGR3	O43761	229 aa		13.27	□□□□□ -0.29
ECHDC2-223	ENST00000542552	DNAJC8	O75937	253 aa	Predicted RBP	13.27	□□□□□ -0.29
ECHDC2-223	ENST00000542552	CCNB2	O95067	398 aa		13.27	□□□□□ -0.29
ECHDC2-223	ENST00000542552	CSF3	P09919	207 aa		13.27	□□□□□ -0.29
ECHDC2-223	ENST00000542552	FAM157B	P0CG42	384 aa		13.27	□□□□□ -0.29
ECHDC2-223	ENST00000542552	HIST1H1C	P16403	213 aa	Known RBP	13.27	□□□□□ -0.29
ECHDC2-223	ENST00000542552	HOXB6	P17509	224 aa	Known RBP	13.27	□□□□□ -0.29
ECHDC2-223	ENST00000542552	WNT5A	P41221	380 aa		13.27	□□□□□ -0.29
ECHDC2-223	ENST00000542552	RAD52	P43351	418 aa		13.27	□□□□□ -0.29
ECHDC2-223	ENST00000542552	LSM6	P62312	80 aa	Known RBP	13.27	□□□□□ -0.29
ECHDC2-223	ENST00000542552	PPP1R8	Q12972	351 aa	Known RBP	13.27	□□□□□ -0.29
ECHDC2-223	ENST00000542552	GK3P	Q14409	553 aa		13.27	□□□□□ -0.29
ECHDC2-223	ENST00000542552	MICA	Q29983	383 aa		13.27	□□□□□ -0.29
ECHDC2-223	ENST00000542552	ALDH16A1	Q8IZ83	802 aa		13.27	□□□□□ -0.29
ECHDC2-223	ENST00000542552	CANT1	Q8WVQ1	401 aa		13.27	□□□□□ -0.29
ECHDC2-223	ENST00000542552	FAM168A	Q92567	244 aa		13.27	□□□□□ -0.29
ECHDC2-223	ENST00000542552	TSSK2	Q96PF2	358 aa		13.27	□□□□□ -0.29
ECHDC2-223	ENST00000542552	IFT27	Q9BW83	186 aa		13.27	□□□□□ -0.29
ECHDC2-223	ENST00000542552	CHID1	Q9BWS9	393 aa		13.27	□□□□□ -0.29
ECHDC2-223	ENST00000542552	DGCR6L	Q9BY27	220 aa		13.27	□□□□□ -0.29
ECHDC2-223	ENST00000542552	BCL2L14	Q9BZR8	327 aa		13.27	□□□□□ -0.29
ECHDC2-223	ENST00000542552	RAB1B	Q9H0U4	201 aa		13.27	□□□□□ -0.29
ECHDC2-223	ENST00000542552	EGLN3	Q9H6Z9	239 aa		13.27	□□□□□ -0.29
ECHDC2-223	ENST00000542552	REEP1	Q9H902	201 aa		13.27	□□□□□ -0.29
ECHDC2-223	ENST00000542552	MYEF2	Q9P2K5	600 aa	Known RBP	13.27	□□□□□ -0.29
ECHDC2-223	ENST00000542552	COA3	Q9Y2R0	106 aa	Predicted RBP	13.27	□□□□□ -0.29
ECHDC2-223	ENST00000542552	FKBP7	Q9Y680	259 aa		13.27	□□□□□ -0.29
ECHDC2-223	ENST00000542552	CDH10	Q9Y6N8	788 aa		13.27	□□□□□ -0.29
ECHDC2-223	ENST00000542552	YLPM1	P49750	1951 aa	Known RBP	13.27	□□□□□ -0.29
ECHDC2-223	ENST00000542552	IGLV3-9	A0A075B6K5	115 aa		13.26	□□□□□ -0.29
ECHDC2-223	ENST00000542552	DHRS12	A0PJE2	317 aa		13.26	□□□□□ -0.29
ECHDC2-223	ENST00000542552	C5orf49	A4QMS7	147 aa		13.26	□□□□□ -0.29
ECHDC2-223	ENST00000542552	BHLHE40	O14503	412 aa		13.26	□□□□□ -0.29
ECHDC2-223	ENST00000542552	GSC2	O15499	205 aa		13.26	□□□□□ -0.29
ECHDC2-223	ENST00000542552	MPZL1	O95297	269 aa		13.26	□□□□□ -0.29
ECHDC2-223	ENST00000542552	STAMBP	O95630	424 aa		13.26	□□□□□ -0.29
ECHDC2-223	ENST00000542552	ADRA2A	P08913	450 aa		13.26	□□□□□ -0.29
ECHDC2-223	ENST00000542552	CRABP1	P29762	137 aa		13.26	□□□□□ -0.29
ECHDC2-223	ENST00000542552	GDI2	P50395	445 aa	Known RBP	13.26	□□□□□ -0.29
ECHDC2-223	ENST00000542552	RPL13AP3	Q6NVV1	102 aa		13.26	□□□□□ -0.29
ECHDC2-223	ENST00000542552	ZNF774	Q6NX45	483 aa		13.26	□□□□□ -0.29
ECHDC2-223	ENST00000542552	RASSF6	Q6ZTQ3	369 aa		13.26	□□□□□ -0.29
ECHDC2-223	ENST00000542552		Q71RC1	249 aa	Predicted RBP	13.26	□□□□□ -0.29
ECHDC2-223	ENST00000542552	OR6V1	Q8N148	313 aa		13.26	□□□□□ -0.29
ECHDC2-223	ENST00000542552	AQP11	Q8NBQ7	271 aa		13.26	□□□□□ -0.29
ECHDC2-223	ENST00000542552	MAPK1IP1L	Q8NDC0	245 aa		13.26	□□□□□ -0.29
ECHDC2-223	ENST00000542552	OR8D4	Q8NGM9	314 aa		13.26	□□□□□ -0.29
ECHDC2-223	ENST00000542552	NEU4	Q8WWR8	484 aa	Predicted RBP	13.26	□□□□□ -0.29
ECHDC2-223	ENST00000542552	FOXN4	Q96NZ1	517 aa		13.26	□□□□□ -0.29
ECHDC2-223	ENST00000542552	NMNAT3	Q96T66	252 aa		13.26	□□□□□ -0.29
ECHDC2-223	ENST00000542552	DDO	Q99489	341 aa		13.26	□□□□□ -0.29
ECHDC2-223	ENST00000542552	SYT3	Q9BQG1	590 aa		13.26	□□□□□ -0.29
ECHDC2-223	ENST00000542552	CADM1	Q9BY67	442 aa	Known RBP	13.26	□□□□□ -0.29
ECHDC2-223	ENST00000542552	PLA2G12A	Q9BZM1	189 aa		13.26	□□□□□ -0.29
ECHDC2-223	ENST00000542552	MYOZ1	Q9NP98	299 aa	Predicted RBP	13.26	□□□□□ -0.29
ECHDC2-223	ENST00000542552	FZR1	Q9UM11	496 aa		13.26	□□□□□ -0.29
ECHDC2-223	ENST00000542552	B9D1	Q9UPM9	204 aa		13.26	□□□□□ -0.29
ECHDC2-223	ENST00000542552	POMP	Q9Y244	141 aa		13.26	□□□□□ -0.29
ECHDC2-223	ENST00000542552	SAMHD1	Q9Y3Z3	626 aa	Known RBP	13.26	□□□□□ -0.29
ECHDC2-223	ENST00000542552		U3KQV3	271 aa		13.26	□□□□□ -0.29
ECHDC2-223	ENST00000542552	HIVEP2	P31629	2446 aa		13.25	□□□□□ -0.29
ECHDC2-223	ENST00000542552	NAV3	Q8IVL0	2385 aa		13.25	□□□□□ -0.29
ECHDC2-223	ENST00000542552	TCRBV3S1	A0A5B6	114 aa		13.25	□□□□□ -0.29
ECHDC2-223	ENST00000542552	OR6C68	A6NDL8	312 aa		13.25	□□□□□ -0.29
ECHDC2-223	ENST00000542552	VWC2L	B2RUY7	222 aa		13.25	□□□□□ -0.29
ECHDC2-223	ENST00000542552	TP53	P04637	393 aa	Predicted RBP	13.25	□□□□□ -0.29
ECHDC2-223	ENST00000542552	GAA	P10253	952 aa		13.25	□□□□□ -0.29
ECHDC2-223	ENST00000542552	COX5B	P10606	129 aa		13.25	□□□□□ -0.29
ECHDC2-223	ENST00000542552	SLC25A16	P16260	332 aa		13.25	□□□□□ -0.29
ECHDC2-223	ENST00000542552	ERVS71-1	P61550	626 aa		13.25	□□□□□ -0.29
ECHDC2-223	ENST00000542552	LOXL1	Q08397	574 aa	Predicted RBP	13.25	□□□□□ -0.29
ECHDC2-223	ENST00000542552	SCRN3	Q0VDG4	424 aa		13.25	□□□□□ -0.29
ECHDC2-223	ENST00000542552	AQP6	Q13520	282 aa		13.25	□□□□□ -0.29
ECHDC2-223	ENST00000542552	ZNF362	Q5T0B9	420 aa	Predicted RBP	13.25	□□□□□ -0.29
ECHDC2-223	ENST00000542552	RGS7BP	Q6MZT1	257 aa	Predicted RBP	13.25	□□□□□ -0.29
ECHDC2-223	ENST00000542552	LEG1	Q6P5S2	330 aa		13.25	□□□□□ -0.29
ECHDC2-223	ENST00000542552	DNM1P34	Q6PK57	102 aa		13.25	□□□□□ -0.29
ECHDC2-223	ENST00000542552	CD300LD	Q6UXZ3	194 aa		13.25	□□□□□ -0.29
ECHDC2-223	ENST00000542552	ZBTB46	Q86UZ6	589 aa		13.25	□□□□□ -0.29
ECHDC2-223	ENST00000542552	ZNF101	Q8IZC7	436 aa		13.25	□□□□□ -0.29
ECHDC2-223	ENST00000542552	PAPD5	Q8NDF8	572 aa	Known RBP	13.25	□□□□□ -0.29
ECHDC2-223	ENST00000542552	NPEPL1	Q8NDH3	523 aa		13.25	□□□□□ -0.29
ECHDC2-223	ENST00000542552	OR4K13	Q8NH42	304 aa		13.25	□□□□□ -0.29
ECHDC2-223	ENST00000542552	C11orf40	Q8WZ69	217 aa		13.25	□□□□□ -0.29
ECHDC2-223	ENST00000542552	MS4A5	Q9H3V2	200 aa		13.25	□□□□□ -0.29
ECHDC2-223	ENST00000542552	DYNLRB1	Q9NP97	96 aa		13.25	□□□□□ -0.29
ECHDC2-223	ENST00000542552	REV1	Q9UBZ9	1251 aa		13.25	□□□□□ -0.29
ECHDC2-223	ENST00000542552	DUSP13	Q9UII6	198 aa		13.25	□□□□□ -0.29
ECHDC2-223	ENST00000542552	ABCA1	O95477	2261 aa		13.25	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms