RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 CNN2Q99439 309 aaKnown RBP20.21■□□□□ 0.83
HOMER3-205ENST00000542541 WDR76Q9H967 626 aa20.21■□□□□ 0.83
HOMER3-205ENST00000542541 CCNB1IP1Q9NPC3 277 aa20.21■□□□□ 0.83
HOMER3-205ENST00000542541 KLF2Q9Y5W3 355 aaPredicted RBP20.21■□□□□ 0.83
HOMER3-205ENST00000542541 FASNP49327 2511 aaKnown RBP20.21■□□□□ 0.83
HOMER3-205ENST00000542541 CCKARP32238 428 aa20.2■□□□□ 0.82
HOMER3-205ENST00000542541 ARR3P36575 388 aa20.2■□□□□ 0.82
HOMER3-205ENST00000542541 NUDT6P53370 316 aa20.2■□□□□ 0.82
HOMER3-205ENST00000542541 CXCR4P61073 352 aa20.2■□□□□ 0.82
HOMER3-205ENST00000542541 AQP6Q13520 282 aa20.2■□□□□ 0.82
HOMER3-205ENST00000542541 ENDOGQ14249 297 aaKnown RBP20.2■□□□□ 0.82
HOMER3-205ENST00000542541 SMN1Q16637 294 aaKnown RBP20.2■□□□□ 0.82
HOMER3-205ENST00000542541 C6orf141Q5SZD1 244 aa20.2■□□□□ 0.82
HOMER3-205ENST00000542541 LYPD4Q6UWN0 246 aa20.2■□□□□ 0.82
HOMER3-205ENST00000542541 SLC16A9Q7RTY1 509 aa20.2■□□□□ 0.82
HOMER3-205ENST00000542541 RNFT2Q96EX2 444 aa20.2■□□□□ 0.82
HOMER3-205ENST00000542541 RNF121Q9H920 327 aa20.2■□□□□ 0.82
HOMER3-205ENST00000542541 AMBNQ9NP70 447 aa20.2■□□□□ 0.82
HOMER3-205ENST00000542541 TIMM10BQ9Y5J6 103 aa20.2■□□□□ 0.82
HOMER3-205ENST00000542541 DBTP11182 482 aaKnown RBP20.2■□□□□ 0.82
HOMER3-205ENST00000542541 CD79AP11912 226 aa20.2■□□□□ 0.82
HOMER3-205ENST00000542541 ZNF91Q05481 1191 aa20.2■□□□□ 0.82
HOMER3-205ENST00000542541 SCRN3Q0VDG4 424 aa20.2■□□□□ 0.82
HOMER3-205ENST00000542541 PCK2Q16822 640 aa20.2■□□□□ 0.82
HOMER3-205ENST00000542541 KLHL22Q53GT1 634 aa20.2■□□□□ 0.82
HOMER3-205ENST00000542541 TMEM53Q6P2H8 277 aa20.2■□□□□ 0.82
HOMER3-205ENST00000542541 WDR31Q8NA23 367 aa20.2■□□□□ 0.82
HOMER3-205ENST00000542541 OR51G2Q8NGK0 314 aa20.2■□□□□ 0.82
HOMER3-205ENST00000542541 OR6N2Q8NGY6 317 aa20.2■□□□□ 0.82
HOMER3-205ENST00000542541 OR52N5Q8NH56 324 aa20.2■□□□□ 0.82
HOMER3-205ENST00000542541 FBXO17Q96EF6 278 aa20.2■□□□□ 0.82
HOMER3-205ENST00000542541 PLCXD1Q9NUJ7 323 aa20.2■□□□□ 0.82
HOMER3-205ENST00000542541 ASH2LQ9UBL3 628 aa20.2■□□□□ 0.82
HOMER3-205ENST00000542541 CYB5R1Q9UHQ9 305 aa20.2■□□□□ 0.82
HOMER3-205ENST00000542541 PCDHGB1Q9Y5G3 927 aa20.2■□□□□ 0.82
HOMER3-205ENST00000542541 HLA-HP01893 362 aa20.19■□□□□ 0.82
HOMER3-205ENST00000542541 SPARCP09486 303 aa20.19■□□□□ 0.82
HOMER3-205ENST00000542541 SBK2P0C263 348 aa20.19■□□□□ 0.82
HOMER3-205ENST00000542541 PPA1Q15181 289 aa20.19■□□□□ 0.82
HOMER3-205ENST00000542541 GSG1Q2KHT4 349 aa20.19■□□□□ 0.82
HOMER3-205ENST00000542541 ZNF454Q8N9F8 522 aa20.19■□□□□ 0.82
HOMER3-205ENST00000542541 GJC3Q8NFK1 279 aa20.19■□□□□ 0.82
HOMER3-205ENST00000542541 MNTQ99583 582 aa20.19■□□□□ 0.82
HOMER3-205ENST00000542541 MED18Q9BUE0 208 aa20.19■□□□□ 0.82
HOMER3-205ENST00000542541 YIPF3Q9GZM5 350 aa20.19■□□□□ 0.82
HOMER3-205ENST00000542541 ADGRL4Q9HBW9 690 aa20.19■□□□□ 0.82
HOMER3-205ENST00000542541 IRGMA1A4Y4 181 aa20.18■□□□□ 0.82
HOMER3-205ENST00000542541 TUBAL3A6NHL2 446 aa20.18■□□□□ 0.82
HOMER3-205ENST00000542541 SELENOFO60613 162 aa20.18■□□□□ 0.82
HOMER3-205ENST00000542541 MRPL3P09001 348 aaKnown RBP20.18■□□□□ 0.82
HOMER3-205ENST00000542541 GRNP28799 593 aaKnown RBP20.18■□□□□ 0.82
HOMER3-205ENST00000542541 NAA10P41227 235 aaPredicted RBP20.18■□□□□ 0.82
HOMER3-205ENST00000542541 RAB1AP62820 205 aa20.18■□□□□ 0.82
HOMER3-205ENST00000542541 RAB40BQ12829 278 aa20.18■□□□□ 0.82
HOMER3-205ENST00000542541 TAB1Q15750 504 aa20.18■□□□□ 0.82
HOMER3-205ENST00000542541 OTPQ5XKR4 325 aa20.18■□□□□ 0.82
HOMER3-205ENST00000542541 DPY19L4Q7Z388 723 aa20.18■□□□□ 0.82
HOMER3-205ENST00000542541 BPIFB6Q8NFQ5 453 aa20.18■□□□□ 0.82
HOMER3-205ENST00000542541 NPDC1Q9NQX5 325 aaPredicted RBP20.18■□□□□ 0.82
HOMER3-205ENST00000542541 MRPS18AQ9NVS2 196 aaKnown RBP20.18■□□□□ 0.82
HOMER3-205ENST00000542541 SCN3BQ9NY72 215 aa20.18■□□□□ 0.82
HOMER3-205ENST00000542541 B3GNT2Q9NY97 397 aa20.18■□□□□ 0.82
HOMER3-205ENST00000542541 ZNF224Q9NZL3 707 aa20.18■□□□□ 0.82
HOMER3-205ENST00000542541 SLC25A15Q9Y619 301 aa20.18■□□□□ 0.82
HOMER3-205ENST00000542541 LHFPL6Q9Y693 200 aa20.18■□□□□ 0.82
HOMER3-205ENST00000542541 TMEM14AQ9Y6G1 99 aa20.18■□□□□ 0.82
HOMER3-205ENST00000542541 RAB36O95755 333 aa20.17■□□□□ 0.82
HOMER3-205ENST00000542541 FADS2O95864 444 aaKnown RBP20.17■□□□□ 0.82
HOMER3-205ENST00000542541 RNF224P0DH78 156 aa20.17■□□□□ 0.82
HOMER3-205ENST00000542541 ZNF32P17041 273 aa20.17■□□□□ 0.82
HOMER3-205ENST00000542541 PIGFQ07326 219 aa20.17■□□□□ 0.82
HOMER3-205ENST00000542541 LAIR2Q6ISS4 152 aa20.17■□□□□ 0.82
HOMER3-205ENST00000542541 ALDH16A1Q8IZ83 802 aa20.17■□□□□ 0.82
HOMER3-205ENST00000542541 WFIKKN1Q96NZ8 548 aa20.17■□□□□ 0.82
HOMER3-205ENST00000542541 FBXL3Q9UKT7 428 aa20.17■□□□□ 0.82
HOMER3-205ENST00000542541 A0A1W2PR80 420 aa20.16■□□□□ 0.82
HOMER3-205ENST00000542541 FAM20BO75063 409 aa20.16■□□□□ 0.82
HOMER3-205ENST00000542541 MMP7P09237 267 aaPredicted RBP20.16■□□□□ 0.82
HOMER3-205ENST00000542541 PATE4P0C8F1 98 aa20.16■□□□□ 0.82
HOMER3-205ENST00000542541 CBR1P16152 277 aa20.16■□□□□ 0.82
HOMER3-205ENST00000542541 PLP2Q04941 152 aa20.16■□□□□ 0.82
HOMER3-205ENST00000542541 FAM169BQ8N8A8 192 aa20.16■□□□□ 0.82
HOMER3-205ENST00000542541 OTOSQ8NHW6 89 aa20.16■□□□□ 0.82
HOMER3-205ENST00000542541 LGALS12Q96DT0 336 aa20.16■□□□□ 0.82
HOMER3-205ENST00000542541 C1orf198Q9H425 327 aa20.16■□□□□ 0.82
HOMER3-205ENST00000542541 NGBQ9NPG2 151 aa20.16■□□□□ 0.82
HOMER3-205ENST00000542541 UBAP1Q9NZ09 502 aa20.16■□□□□ 0.82
HOMER3-205ENST00000542541 EXOGQ9Y2C4 368 aaKnown RBP20.16■□□□□ 0.82
HOMER3-205ENST00000542541 SPTBN1Q01082 2364 aaKnown RBP20.16■□□□□ 0.82
HOMER3-205ENST00000542541 DOPEY1Q5JWR5 2465 aa20.16■□□□□ 0.82
HOMER3-205ENST00000542541 CCDC159P0C7I6 412 aa20.16■□□□□ 0.82
HOMER3-205ENST00000542541 OR2T7P0C7T2 308 aa20.16■□□□□ 0.82
HOMER3-205ENST00000542541 TUBA1BP68363 451 aa20.16■□□□□ 0.82
HOMER3-205ENST00000542541 TUBA4AP68366 448 aa20.16■□□□□ 0.82
HOMER3-205ENST00000542541 SLC18B1Q6NT16 456 aa20.16■□□□□ 0.82
HOMER3-205ENST00000542541 TUBA1AQ71U36 451 aa20.16■□□□□ 0.82
HOMER3-205ENST00000542541 CDC20BQ86Y33 519 aa20.16■□□□□ 0.82
HOMER3-205ENST00000542541 LINC00346Q8IVM7 164 aa20.16■□□□□ 0.82
HOMER3-205ENST00000542541 SLC35F2Q8IXU6 374 aa20.16■□□□□ 0.82
HOMER3-205ENST00000542541 ZNF786Q8N393 782 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms