RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 THEM6Q8WUY1 208 aa12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 WDR13Q9H1Z4 485 aa12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 FBXL3Q9UKT7 428 aa12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 ATRXP46100 2492 aa12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 HEATR5AQ86XA9 2040 aa12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 OR2T7P0C7T2 308 aa12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 VSIG10L2P0DP72 767 aa12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 HAAOP46952 286 aa12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 HOXA1P49639 335 aaPredicted RBP12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 MMP15P51511 669 aa12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 MANEAQ5SRI9 462 aa12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 SLC22A10Q63ZE4 541 aa12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 UNQ6126/PRO20091Q6UXV3 157 aa12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 ZNF600Q6ZNG1 722 aa12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 TMED4Q7Z7H5 227 aa12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 JAZF1Q86VZ6 243 aa12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 OR2T27Q8NH04 317 aa12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 NAT6Q93015 286 aa12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 TRIM2Q9C040 744 aa12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 DNTTIP1Q9H147 329 aa12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 DNAJB12Q9NXW2 375 aaKnown RBP12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 CAMK2AQ9UQM7 478 aa12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 MPDZO75970 2070 aa12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 MED13Q9UHV7 2174 aa12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 H3BMH7 237 aa12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 CYR61O00622 381 aa12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 PIN1P1O15428 100 aa12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 ALOX12BO75342 701 aa12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 NUDT14O95848 222 aa12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 FABP1P07148 127 aa12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 SPI1P17947 270 aa12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 SLC2A5P22732 501 aa12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 PLA2G7Q13093 441 aa12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 C4orf46Q504U0 113 aa12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 FHL5Q5TD97 284 aa12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 WDR74Q6RFH5 385 aaPredicted RBP12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 CDH26Q8IXH8 852 aa12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 PRR22Q8IZ63 422 aa12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 OR6N2Q8NGY6 317 aa12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 PHOSPHO1Q8TCT1 267 aa12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 NPDC1Q9NQX5 325 aaPredicted RBP12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 ASF1BQ9NVP2 202 aa12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 ABRACLQ9P1F3 81 aa12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 PURGQ9UJV8 347 aaKnown RBP12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 ELOA3DA6NLF2 546 aaPredicted RBP12.91□□□□□ -0.34
SFSWAP-210ENST00000541286 C11orf98E9PRG8 122 aa12.91□□□□□ -0.34
SFSWAP-210ENST00000541286 CCSO14618 274 aa12.91□□□□□ -0.34
SFSWAP-210ENST00000541286 GFRA3O60609 400 aa12.91□□□□□ -0.34
SFSWAP-210ENST00000541286 GALR3O60755 368 aaPredicted RBP12.91□□□□□ -0.34
SFSWAP-210ENST00000541286 ATP1B1P05026 303 aa12.91□□□□□ -0.34
SFSWAP-210ENST00000541286 C4BPBP20851 252 aa12.91□□□□□ -0.34
SFSWAP-210ENST00000541286 ACAA2P42765 397 aaKnown RBP12.91□□□□□ -0.34
SFSWAP-210ENST00000541286 RPS18P62269 152 aaKnown RBP12.91□□□□□ -0.34
SFSWAP-210ENST00000541286 ACTA2P62736 377 aa12.91□□□□□ -0.34
SFSWAP-210ENST00000541286 ACTG2P63267 376 aa12.91□□□□□ -0.34
SFSWAP-210ENST00000541286 RBM39Q14498 530 aaKnown RBP12.91□□□□□ -0.34
SFSWAP-210ENST00000541286 ELOA3BQ3SY89 546 aa12.91□□□□□ -0.34
SFSWAP-210ENST00000541286 PABPC1L2AQ5JQF8 200 aa12.91□□□□□ -0.34
SFSWAP-210ENST00000541286 LIN54Q6MZP7 749 aa12.91□□□□□ -0.34
SFSWAP-210ENST00000541286 ULK3Q6PHR2 472 aa12.91□□□□□ -0.34
SFSWAP-210ENST00000541286 CMIPQ8IY22 773 aa12.91□□□□□ -0.34
SFSWAP-210ENST00000541286 CA13Q8N1Q1 262 aa12.91□□□□□ -0.34
SFSWAP-210ENST00000541286 ELOA3Q8NG57 546 aa12.91□□□□□ -0.34
SFSWAP-210ENST00000541286 NT5CQ8TCD5 201 aa12.91□□□□□ -0.34
SFSWAP-210ENST00000541286 FCAMRQ8WWV6 532 aa12.91□□□□□ -0.34
SFSWAP-210ENST00000541286 SLC41A2Q96JW4 573 aa12.91□□□□□ -0.34
SFSWAP-210ENST00000541286 KCNK15Q9H427 330 aa12.91□□□□□ -0.34
SFSWAP-210ENST00000541286 C14orf105Q9NVL8 296 aa12.91□□□□□ -0.34
SFSWAP-210ENST00000541286 FAM221BA6H8Z2 402 aa12.91□□□□□ -0.34
SFSWAP-210ENST00000541286 NTN3O00634 580 aaPredicted RBP12.91□□□□□ -0.34
SFSWAP-210ENST00000541286 KRT33AO76009 404 aa12.91□□□□□ -0.34
SFSWAP-210ENST00000541286 HPP00738 406 aa12.91□□□□□ -0.34
SFSWAP-210ENST00000541286 PLGP00747 810 aaPredicted RBP12.91□□□□□ -0.34
SFSWAP-210ENST00000541286 CSN2P05814 226 aa12.91□□□□□ -0.34
SFSWAP-210ENST00000541286 PPP3CBP16298 524 aa12.91□□□□□ -0.34
SFSWAP-210ENST00000541286 GALP22466 123 aa12.91□□□□□ -0.34
SFSWAP-210ENST00000541286 NOVA1P51513 510 aaKnown RBP12.91□□□□□ -0.34
SFSWAP-210ENST00000541286 EPHA4P54764 986 aa12.91□□□□□ -0.34
SFSWAP-210ENST00000541286 GLDNQ6ZMI3 551 aaPredicted RBP12.91□□□□□ -0.34
SFSWAP-210ENST00000541286 D2HGDHQ8N465 521 aa12.91□□□□□ -0.34
SFSWAP-210ENST00000541286 ARHGEF39Q8N4T4 335 aa12.91□□□□□ -0.34
SFSWAP-210ENST00000541286 ZNF676Q8N7Q3 588 aa12.91□□□□□ -0.34
SFSWAP-210ENST00000541286 OR5M9Q8NGP3 310 aa12.91□□□□□ -0.34
SFSWAP-210ENST00000541286 DUSP19Q8WTR2 217 aa12.91□□□□□ -0.34
SFSWAP-210ENST00000541286 TSLPQ969D9 159 aa12.91□□□□□ -0.34
SFSWAP-210ENST00000541286 S100A16Q96FQ6 103 aaKnown RBP12.91□□□□□ -0.34
SFSWAP-210ENST00000541286 ALG12Q9BV10 488 aa12.91□□□□□ -0.34
SFSWAP-210ENST00000541286 ZNF471Q9BX82 626 aaPredicted RBP12.91□□□□□ -0.34
SFSWAP-210ENST00000541286 CUTCQ9NTM9 273 aa12.91□□□□□ -0.34
SFSWAP-210ENST00000541286 CDV3Q9UKY7 258 aaKnown RBP12.91□□□□□ -0.34
SFSWAP-210ENST00000541286 ADAMTS20P59510 1910 aa12.91□□□□□ -0.34
SFSWAP-210ENST00000541286 COL12A1Q99715 3063 aa12.91□□□□□ -0.34
SFSWAP-210ENST00000541286 CDC14CA4D256 554 aa12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 FAM25EA8MYX2 175 aa12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 PRR32B1ATL7 298 aa12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 WDPCPO95876 746 aa12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 APOC1P02654 83 aa12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 HIST1H2ABP04908 130 aa12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 CRYBA1P05813 215 aa12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 ANXA2P07355 339 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms