RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 PRSS16Q9NQE7 514 aa8.59□□□□□ -1.03
CTNNA1-243ENST00000540387 ST6GALNAC2Q9UJ37 374 aa8.59□□□□□ -1.03
CTNNA1-243ENST00000540387 NOP16Q9Y3C1 178 aaKnown RBP8.59□□□□□ -1.03
CTNNA1-243ENST00000540387 MMP24Q9Y5R2 645 aa8.59□□□□□ -1.03
CTNNA1-243ENST00000540387 POMT1Q9Y6A1 747 aa8.59□□□□□ -1.03
CTNNA1-243ENST00000540387 SMCO3A2RU48 225 aa8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 A6NNC1 897 aa8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 C9J4A7 227 aa8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 ADAP1O75689 374 aa8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 GLSO94925 669 aaPredicted RBP8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 MRPL3P09001 348 aaKnown RBP8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 FURINP09958 794 aa8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 SLC35G4P0C7Q5 338 aa8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 AKAIN1P0CW23 69 aa8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 GPR3P46089 330 aa8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 ID4P47928 161 aa8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 DHRS2Q13268 280 aa8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 AKR1C8PQ5T2L2 129 aa8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 ETFRF1Q6IPR1 90 aa8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 NIPAL3Q6P499 406 aa8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 CERS6Q6ZMG9 384 aa8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 MEPCEQ7L2J0 689 aaKnown RBP8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 GID4Q8IVV7 300 aa8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 ASB17Q8WXJ9 295 aa8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 DVL3Q92997 716 aaPredicted RBP8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 NEIL2Q969S2 332 aa8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 ATG10Q9H0Y0 220 aa8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 SYT4Q9H2B2 425 aa8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 SYNPO2LQ9H987 977 aa8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 NCDNQ9UBB6 729 aa8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 TMED3Q9Y3Q3 217 aa8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 TICRRQ7Z2Z1 1910 aa8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 LOC100509620A0A075B734 347 aa8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 CCDC163A0A0D9SF12 145 aa8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 MEIS3P1A6NDR6 274 aa8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 TMEM235A6NFC5 223 aa8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 CTNSO60931 367 aa8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 PLGP00747 810 aaPredicted RBP8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 METTL15P1P0C7V9 234 aa8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 MAOAP21397 527 aa8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 ITPKBP27987 946 aa8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 HTR2CP28335 458 aa8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 RBX1P62877 108 aa8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 NKX6-1P78426 367 aaPredicted RBP8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 ZP2Q05996 745 aa8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 SRSF5Q13243 272 aaKnown RBP8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 ENPP2Q13822 863 aa8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 ELAVL3Q14576 367 aaKnown RBP8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 JOSD1Q15040 202 aaPredicted RBP8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 FAM151BQ6UXP7 276 aa8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 TPRG1Q6ZUI0 275 aa8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 PEG10Q86TG7 708 aaKnown RBP8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 FJX1Q86VR8 437 aa8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 THOC6Q86W42 341 aaKnown RBP8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 CACUL1Q86Y37 369 aa8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 TRAPPC5Q8IUR0 188 aa8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 GALNT16Q8N428 558 aa8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 M1APQ8TC57 530 aa8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 C15orf40Q8WUR7 153 aa8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 FAM3CQ92520 227 aa8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 PRRC1Q96M27 445 aa8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 CXorf36Q9H7Y0 433 aa8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 SLC2A4RGQ9NR83 387 aa8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 TAS2R8Q9NYW2 309 aa8.58□□□□□ -1.04
CTNNA1-243ENST00000540387 NPIPB15A6NHN6 443 aaPredicted RBP8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 ALOX12BO75342 701 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 CLDN7O95471 211 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 CD3DP04234 171 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 SERPINA5P05154 406 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 OR8U9P0C7N5 309 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 GZMBP10144 247 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 SRMP19623 302 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 DRD1P21728 446 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 IFNGR2P38484 337 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 RGS8P57771 180 aaPredicted RBP8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 RPS11P62280 158 aaKnown RBP eCLIP8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 RAB1AP62820 205 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 EIF5AP63241 154 aaKnown RBP8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 GUCA2AQ02747 115 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 ZNF85Q03923 595 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 CNTN1Q12860 1018 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 DUSP5Q16690 384 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 C14orf28Q4W4Y0 310 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 YOD1Q5VVQ6 348 aaPredicted RBP8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 KHDRBS2Q5VWX1 349 aaKnown RBP8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 GGNBP1Q5YKI7 109 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 ZNF529Q6P280 563 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 ARHGAP11AQ6P4F7 1023 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 HMGN2P46Q86SG4 172 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 JAGN1Q8N5M9 183 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 OR8S1Q8NH09 359 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 OR8U1Q8NH10 309 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 NEK7Q8TDX7 302 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 DCUN1D4Q92564 292 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 KISS1RQ969F8 398 aaPredicted RBP8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 MIB2Q96AX9 1013 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 SLC25A36Q96CQ1 311 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 RRNAD1Q96FB5 475 aaKnown RBP8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 THOC3Q96J01 351 aaKnown RBP8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 PTCHD1Q96NR3 888 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms