RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 CCNB2O95067 398 aa12.94□□□□□ -0.34
UBE3B-212ENST00000540230 CLPTM1O96005 669 aa12.94□□□□□ -0.34
UBE3B-212ENST00000540230 HEXAP06865 529 aa12.94□□□□□ -0.34
UBE3B-212ENST00000540230 RAP2AP10114 183 aa12.94□□□□□ -0.34
UBE3B-212ENST00000540230 STOMP27105 288 aa12.94□□□□□ -0.34
UBE3B-212ENST00000540230 APLNRP35414 380 aa12.94□□□□□ -0.34
UBE3B-212ENST00000540230 BNIP1Q12981 228 aa12.94□□□□□ -0.34
UBE3B-212ENST00000540230 CLEC12AQ5QGZ9 265 aa12.94□□□□□ -0.34
UBE3B-212ENST00000540230 LEG1Q6P5S2 330 aa12.94□□□□□ -0.34
UBE3B-212ENST00000540230 CLEC2AQ6UVW9 174 aa12.94□□□□□ -0.34
UBE3B-212ENST00000540230 ZNF101Q8IZC7 436 aa12.94□□□□□ -0.34
UBE3B-212ENST00000540230 AQP11Q8NBQ7 271 aa12.94□□□□□ -0.34
UBE3B-212ENST00000540230 SDR9C7Q8NEX9 313 aa12.94□□□□□ -0.34
UBE3B-212ENST00000540230 OR4K13Q8NH42 304 aa12.94□□□□□ -0.34
UBE3B-212ENST00000540230 CHID1Q9BWS9 393 aa12.94□□□□□ -0.34
UBE3B-212ENST00000540230 CADM1Q9BY67 442 aaKnown RBP12.94□□□□□ -0.34
UBE3B-212ENST00000540230 TPK1Q9H3S4 243 aa12.94□□□□□ -0.34
UBE3B-212ENST00000540230 FN3KQ9H479 309 aa12.94□□□□□ -0.34
UBE3B-212ENST00000540230 IGLV1-36A0A0B4J1U3 117 aa12.93□□□□□ -0.34
UBE3B-212ENST00000540230 DHRS12A0PJE2 317 aa12.93□□□□□ -0.34
UBE3B-212ENST00000540230 C5orf49A4QMS7 147 aa12.93□□□□□ -0.34
UBE3B-212ENST00000540230 AQP12BA6NM10 295 aa12.93□□□□□ -0.34
UBE3B-212ENST00000540230 ARPC3O15145 178 aa12.93□□□□□ -0.34
UBE3B-212ENST00000540230 KHDRBS3O75525 346 aaKnown RBP12.93□□□□□ -0.34
UBE3B-212ENST00000540230 DNAJC8O75937 253 aaPredicted RBP12.93□□□□□ -0.34
UBE3B-212ENST00000540230 PTHP01270 115 aa12.93□□□□□ -0.34
UBE3B-212ENST00000540230 ADRA2AP08913 450 aa12.93□□□□□ -0.34
UBE3B-212ENST00000540230 GUCA1AP43080 201 aaPredicted RBP12.93□□□□□ -0.34
UBE3B-212ENST00000540230 ALDH3B1P43353 468 aa12.93□□□□□ -0.34
UBE3B-212ENST00000540230 UCP2P55851 309 aa12.93□□□□□ -0.34
UBE3B-212ENST00000540230 MEP1BQ16820 701 aa12.93□□□□□ -0.34
UBE3B-212ENST00000540230 TMEM255AQ5JRV8 349 aa12.93□□□□□ -0.34
UBE3B-212ENST00000540230 SLC35F1Q5T1Q4 408 aa12.93□□□□□ -0.34
UBE3B-212ENST00000540230 RGS7BPQ6MZT1 257 aaPredicted RBP12.93□□□□□ -0.34
UBE3B-212ENST00000540230 TMEM179BQ7Z7N9 219 aa12.93□□□□□ -0.34
UBE3B-212ENST00000540230 AQP12AQ8IXF9 295 aa12.93□□□□□ -0.34
UBE3B-212ENST00000540230 C10orf105Q8TEF2 133 aa12.93□□□□□ -0.34
UBE3B-212ENST00000540230 FAM168AQ92567 244 aa12.93□□□□□ -0.34
UBE3B-212ENST00000540230 RHNO1Q9BSD3 238 aa12.93□□□□□ -0.34
UBE3B-212ENST00000540230 REEP1Q9H902 201 aa12.93□□□□□ -0.34
UBE3B-212ENST00000540230 DYNLRB1Q9NP97 96 aa12.93□□□□□ -0.34
UBE3B-212ENST00000540230 DUSP13Q9UII6 198 aa12.93□□□□□ -0.34
UBE3B-212ENST00000540230 POMPQ9Y244 141 aa12.93□□□□□ -0.34
UBE3B-212ENST00000540230 TIMM10BQ9Y5J6 103 aa12.93□□□□□ -0.34
UBE3B-212ENST00000540230 CDH10Q9Y6N8 788 aa12.93□□□□□ -0.34
UBE3B-212ENST00000540230 SVEP1Q4LDE5 3571 aa12.93□□□□□ -0.34
UBE3B-212ENST00000540230 NIPBLQ6KC79 2804 aaeCLIP12.93□□□□□ -0.34
UBE3B-212ENST00000540230 ABCA1O95477 2261 aa12.93□□□□□ -0.34
UBE3B-212ENST00000540230 YLPM1P49750 1951 aaKnown RBP12.93□□□□□ -0.34
UBE3B-212ENST00000540230 VSTM5A8MXK1 200 aa12.93□□□□□ -0.34
UBE3B-212ENST00000540230 BHLHE40O14503 412 aa12.93□□□□□ -0.34
UBE3B-212ENST00000540230 GSC2O15499 205 aa12.93□□□□□ -0.34
UBE3B-212ENST00000540230 CST1P01037 141 aa12.93□□□□□ -0.34
UBE3B-212ENST00000540230 TP53P04637 393 aaPredicted RBP12.93□□□□□ -0.34
UBE3B-212ENST00000540230 LCKP06239 509 aa12.93□□□□□ -0.34
UBE3B-212ENST00000540230 GAAP10253 952 aa12.93□□□□□ -0.34
UBE3B-212ENST00000540230 RPS23P62266 143 aaKnown RBP12.93□□□□□ -0.34
UBE3B-212ENST00000540230 FLOT2Q14254 428 aa12.93□□□□□ -0.34
UBE3B-212ENST00000540230 MICAQ29983 383 aa12.93□□□□□ -0.34
UBE3B-212ENST00000540230 ALKBH6Q3KRA9 238 aa12.93□□□□□ -0.34
UBE3B-212ENST00000540230 RFPL4BQ6ZWI9 263 aa12.93□□□□□ -0.34
UBE3B-212ENST00000540230 GLB1L2Q8IW92 636 aa12.93□□□□□ -0.34
UBE3B-212ENST00000540230 OR6V1Q8N148 313 aa12.93□□□□□ -0.34
UBE3B-212ENST00000540230 ICA1LQ8NDH6 482 aa12.93□□□□□ -0.34
UBE3B-212ENST00000540230 OR1J2Q8NGS2 313 aa12.93□□□□□ -0.34
UBE3B-212ENST00000540230 C11orf40Q8WZ69 217 aa12.93□□□□□ -0.34
UBE3B-212ENST00000540230 NIPSNAP1Q9BPW8 284 aa12.93□□□□□ -0.34
UBE3B-212ENST00000540230 SRA1Q9HD15 236 aaKnown RBP12.93□□□□□ -0.34
UBE3B-212ENST00000540230 IL20Q9NYY1 176 aa12.93□□□□□ -0.34
UBE3B-212ENST00000540230 FKBP7Q9Y680 259 aa12.93□□□□□ -0.34
UBE3B-212ENST00000540230 OR6C68A6NDL8 312 aa12.92□□□□□ -0.34
UBE3B-212ENST00000540230 C12orf71A8MTZ7 269 aa12.92□□□□□ -0.34
UBE3B-212ENST00000540230 FAM171A2A8MVW0 826 aa12.92□□□□□ -0.34
UBE3B-212ENST00000540230 M0R233 179 aa12.92□□□□□ -0.34
UBE3B-212ENST00000540230 SYNGR3O43761 229 aa12.92□□□□□ -0.34
UBE3B-212ENST00000540230 SOX14O95416 240 aa12.92□□□□□ -0.34
UBE3B-212ENST00000540230 STAMBPO95630 424 aa12.92□□□□□ -0.34
UBE3B-212ENST00000540230 PCSK6P29122 969 aa12.92□□□□□ -0.34
UBE3B-212ENST00000540230 EVX1P49640 407 aa12.92□□□□□ -0.34
UBE3B-212ENST00000540230 GDI2P50395 445 aaKnown RBP12.92□□□□□ -0.34
UBE3B-212ENST00000540230 RIPPLY3P57055 190 aa12.92□□□□□ -0.34
UBE3B-212ENST00000540230 SPATA46Q5T0L3 261 aa12.92□□□□□ -0.34
UBE3B-212ENST00000540230 RASSF6Q6ZTQ3 369 aa12.92□□□□□ -0.34
UBE3B-212ENST00000540230 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.92□□□□□ -0.34
UBE3B-212ENST00000540230 SYT9Q86SS6 491 aa12.92□□□□□ -0.34
UBE3B-212ENST00000540230 JAZF1Q86VZ6 243 aa12.92□□□□□ -0.34
UBE3B-212ENST00000540230 SPATA24Q86W54 205 aa12.92□□□□□ -0.34
UBE3B-212ENST00000540230 LINC00471Q8N535 108 aa12.92□□□□□ -0.34
UBE3B-212ENST00000540230 OR10G2Q8NGC3 310 aa12.92□□□□□ -0.34
UBE3B-212ENST00000540230 OR52E2Q8NGJ4 325 aa12.92□□□□□ -0.34
UBE3B-212ENST00000540230 OR1J1Q8NGS3 322 aa12.92□□□□□ -0.34
UBE3B-212ENST00000540230 RAB1BQ9H0U4 201 aa12.92□□□□□ -0.34
UBE3B-212ENST00000540230 RPRD1BQ9NQG5 326 aaKnown RBP12.92□□□□□ -0.34
UBE3B-212ENST00000540230 ASH2LQ9UBL3 628 aa12.92□□□□□ -0.34
UBE3B-212ENST00000540230 B9D1Q9UPM9 204 aa12.92□□□□□ -0.34
UBE3B-212ENST00000540230 IGLV3-9A0A075B6K5 115 aa12.91□□□□□ -0.34
UBE3B-212ENST00000540230 TCRBV3S1A0A5B6 114 aa12.91□□□□□ -0.34
UBE3B-212ENST00000540230 DOK2O60496 412 aa12.91□□□□□ -0.34
UBE3B-212ENST00000540230 NGFP01138 241 aa12.91□□□□□ -0.34
UBE3B-212ENST00000540230 ZNF250P15622 560 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms