RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 ASAH2BP0C7U1 165 aa12.55□□□□□ -0.4
SCNN1A-215ENST00000540037 NFYBP25208 207 aa12.55□□□□□ -0.4
SCNN1A-215ENST00000540037 CBX5P45973 191 aa12.55□□□□□ -0.4
SCNN1A-215ENST00000540037 NPBWR1P48145 328 aa12.55□□□□□ -0.4
SCNN1A-215ENST00000540037 ISXQ2M1V0 245 aa12.55□□□□□ -0.4
SCNN1A-215ENST00000540037 TMEM225Q6GV28 225 aa12.55□□□□□ -0.4
SCNN1A-215ENST00000540037 PHOSPHO1Q8TCT1 267 aa12.55□□□□□ -0.4
SCNN1A-215ENST00000540037 PMM1Q92871 262 aa12.55□□□□□ -0.4
SCNN1A-215ENST00000540037 SLC41A2Q96JW4 573 aa12.55□□□□□ -0.4
SCNN1A-215ENST00000540037 A0A1B0GW55 424 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 TMEM200CA6NKL6 621 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 OR2F2O95006 317 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 DUX4L2P0CJ85 424 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 DUX4L3P0CJ86 424 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 DUX4L4P0CJ87 422 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 DUX4L5P0CJ88 424 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 DUX4L6P0CJ89 424 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 DUX4L7P0CJ90 424 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 CCL5P13501 91 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 PVALBP20472 110 aaPredicted RBP12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 OR2F1Q13607 317 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 ACOT7LQ6ZUV0 252 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 ATG4DQ86TL0 474 aaPredicted RBP12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 TMEM229BQ8NBD8 167 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 ADAD2Q8NCV1 583 aaKnown RBP12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 LILRB1Q8NHL6 650 aaPredicted RBP12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 ROBO4Q8WZ75 1007 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 TAAR8Q969N4 342 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 PLA2G2FQ9BZM2 168 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 SELENOIQ9C0D9 397 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 PIGMQ9H3S5 423 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 Q9N2J8 555 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 UPB1Q9UBR1 384 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 DUX4Q9UBX2 424 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 EPHA6Q9UF33 1036 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 F8W036 122 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 H2AFB1P0C5Y9 115 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 PGAM2P15259 253 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 VAMP1P23763 118 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 HTR2CP28335 458 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 RAB13P51153 203 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 CXADRP78310 365 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 BLOC1S1P78537 153 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 SCRN3Q0VDG4 424 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 PMPCAQ10713 525 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 INPP5JQ15735 1006 aaPredicted RBP12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 CDNFQ49AH0 187 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 MARCH3Q86UD3 253 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 PARGQ86W56 976 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 JAGN1Q8N5M9 183 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 OTOSQ8NHW6 89 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 BAHD1Q8TBE0 780 aaPredicted RBP12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 CPNE2Q96FN4 548 aaPredicted RBP12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 CFAP54Q96N23 3096 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 RTN4RQ9BZR6 473 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 COA4Q9NYJ1 87 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 PRR13Q9NZ81 148 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 NDRG3Q9UGV2 375 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 C13orf42A0A1B0GVH6 325 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 ADH1BP00325 375 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 SPARCP09486 303 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 GDI1P31150 447 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 RASGEF1BQ0VAM2 473 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 RUNX3Q13761 415 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 ZNF345Q14585 488 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 ZNF528Q3MIS6 628 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 EEF1A1P5Q5VTE0 462 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 BHLHE23Q8NDY6 225 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 ASB5Q8WWX0 329 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 SCARF2Q96GP6 870 aaPredicted RBP12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 GAS2L1Q99501 681 aaPredicted RBP12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 CCDC3Q9BQI4 270 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 SLC25A21Q9BQT8 299 aaPredicted RBP12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 HRASLS2Q9NWW9 162 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 MKL2Q9ULH7 1088 aa12.54□□□□□ -0.4
SCNN1A-215ENST00000540037 PCNX3Q9H6A9 2034 aa12.53□□□□□ -0.4
SCNN1A-215ENST00000540037 LOC101059948A0A1B0GTJ6 334 aa12.53□□□□□ -0.4
SCNN1A-215ENST00000540037 OR14I1A6ND48 311 aa12.53□□□□□ -0.4
SCNN1A-215ENST00000540037 SOX1O00570 391 aaPredicted RBP12.53□□□□□ -0.4
SCNN1A-215ENST00000540037 MPZL1O95297 269 aa12.53□□□□□ -0.4
SCNN1A-215ENST00000540037 SPP1P10451 314 aa12.53□□□□□ -0.4
SCNN1A-215ENST00000540037 AKR1C4P17516 323 aa12.53□□□□□ -0.4
SCNN1A-215ENST00000540037 HOXA1P49639 335 aaPredicted RBP12.53□□□□□ -0.4
SCNN1A-215ENST00000540037 RAB38P57729 211 aa12.53□□□□□ -0.4
SCNN1A-215ENST00000540037 ZNF542PQ5EBM4 170 aa12.53□□□□□ -0.4
SCNN1A-215ENST00000540037 CHRDL2Q6WN34 429 aa12.53□□□□□ -0.4
SCNN1A-215ENST00000540037 TMEM184AQ6ZMB5 413 aa12.53□□□□□ -0.4
SCNN1A-215ENST00000540037 ZNF321PQ8N8H1 164 aa12.53□□□□□ -0.4
SCNN1A-215ENST00000540037 OR5AP2Q8NGF4 316 aa12.53□□□□□ -0.4
SCNN1A-215ENST00000540037 TMED6Q8WW62 240 aa12.53□□□□□ -0.4
SCNN1A-215ENST00000540037 FAM46BQ96A09 425 aa12.53□□□□□ -0.4
SCNN1A-215ENST00000540037 ATPIF1Q9UII2 106 aa12.53□□□□□ -0.4
SCNN1A-215ENST00000540037 DHDHQ9UQ10 334 aa12.53□□□□□ -0.4
SCNN1A-215ENST00000540037 FAM96BQ9Y3D0 163 aa12.53□□□□□ -0.4
SCNN1A-215ENST00000540037 A0A0B4J2A0 478 aa12.53□□□□□ -0.4
SCNN1A-215ENST00000540037 SLC25A4P12235 298 aa12.53□□□□□ -0.4
SCNN1A-215ENST00000540037 ZBTB25P24278 435 aa12.53□□□□□ -0.4
SCNN1A-215ENST00000540037 PRKXP51817 358 aa12.53□□□□□ -0.4
SCNN1A-215ENST00000540037 SCAND1P57086 179 aa12.53□□□□□ -0.4
SCNN1A-215ENST00000540037 IL13RA1P78552 427 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms