RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 C1orf162Q8NEQ5 155 aaPredicted RBP13.55□□□□□ -0.24
DDB1-216ENST00000539739 STEAP2Q8NFT2 490 aa13.55□□□□□ -0.24
DDB1-216ENST00000539739 USB1Q9BQ65 265 aaKnown RBP13.55□□□□□ -0.24
DDB1-216ENST00000539739 MOKQ9UQ07 419 aa13.55□□□□□ -0.24
DDB1-216ENST00000539739 COA3Q9Y2R0 106 aaPredicted RBP13.55□□□□□ -0.24
DDB1-216ENST00000539739 TMA7Q9Y2S6 64 aaKnown RBP13.55□□□□□ -0.24
DDB1-216ENST00000539739 SPTBN1Q01082 2364 aaKnown RBP13.55□□□□□ -0.24
DDB1-216ENST00000539739 IGLV1-36A0A0B4J1U3 117 aa13.54□□□□□ -0.24
DDB1-216ENST00000539739 PRODHO43272 600 aa13.54□□□□□ -0.24
DDB1-216ENST00000539739 ICMTO60725 284 aa13.54□□□□□ -0.24
DDB1-216ENST00000539739 RAD51DO75771 328 aa13.54□□□□□ -0.24
DDB1-216ENST00000539739 FARS2O95363 451 aaKnown RBP13.54□□□□□ -0.24
DDB1-216ENST00000539739 CLIC3O95833 236 aa13.54□□□□□ -0.24
DDB1-216ENST00000539739 GYPBP06028 91 aa13.54□□□□□ -0.24
DDB1-216ENST00000539739 BLVRAP53004 296 aa13.54□□□□□ -0.24
DDB1-216ENST00000539739 SNRPGP62308 76 aaKnown RBP13.54□□□□□ -0.24
DDB1-216ENST00000539739 MRPS34P82930 218 aaKnown RBP13.54□□□□□ -0.24
DDB1-216ENST00000539739 IL5RAQ01344 420 aa13.54□□□□□ -0.24
DDB1-216ENST00000539739 TAGLNQ01995 201 aaKnown RBP13.54□□□□□ -0.24
DDB1-216ENST00000539739 SRSF1Q07955 248 aaKnown RBP eCLIP13.54□□□□□ -0.24
DDB1-216ENST00000539739 NRN1LQ496H8 165 aa13.54□□□□□ -0.24
DDB1-216ENST00000539739 SLC35D3Q5M8T2 416 aa13.54□□□□□ -0.24
DDB1-216ENST00000539739 NXNL2Q5VZ03 156 aa13.54□□□□□ -0.24
DDB1-216ENST00000539739 FAM122CQ6P4D5 195 aa13.54□□□□□ -0.24
DDB1-216ENST00000539739 USP43Q70EL4 1123 aa13.54□□□□□ -0.24
DDB1-216ENST00000539739 GID4Q8IVV7 300 aa13.54□□□□□ -0.24
DDB1-216ENST00000539739 C8orf59Q8N0T1 100 aaPredicted RBP13.54□□□□□ -0.24
DDB1-216ENST00000539739 OR1K1Q8NGR3 316 aa13.54□□□□□ -0.24
DDB1-216ENST00000539739 CHAC2Q8WUX2 184 aa13.54□□□□□ -0.24
DDB1-216ENST00000539739 RASSF1Q9NS23 344 aa13.54□□□□□ -0.24
DDB1-216ENST00000539739 TMEM38BQ9NVV0 291 aa13.54□□□□□ -0.24
DDB1-216ENST00000539739 HSPE1-MOB4S4R3N1 261 aa13.54□□□□□ -0.24
DDB1-216ENST00000539739 UBR5O95071 2799 aaPredicted RBP13.54□□□□□ -0.24
DDB1-216ENST00000539739 FAM171A2A8MVW0 826 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 HLA-DQA2P01906 255 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 OR8G3PP0DMU2 310 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 CLUP10909 449 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 B4GALT1P15291 398 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 FMO3P31513 532 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 CDAP32320 146 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 PYCR1P32322 319 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 UGT2B10P36537 528 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 RPS7P62081 194 aaKnown RBP13.53□□□□□ -0.24
DDB1-216ENST00000539739 GABRA6Q16445 453 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 SGCAQ16586 387 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 CEP78Q5JTW2 689 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 MEDAGQ5VYS4 303 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 ZNF627Q7L945 461 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 GPR141Q7Z602 305 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 CCDC36Q8IYA8 594 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 ENTHD1Q8IYW4 607 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 SLC22A24Q8N4F4 322 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 OR51L1Q8NGJ5 315 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 OR6K6Q8NGW6 343 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 UBE2FQ969M7 185 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 Q96MT0 163 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 MUS81Q96NY9 551 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 DOK1Q99704 481 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 HCAR1Q9BXC0 346 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 OR10A4Q9H209 315 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 KCNN2Q9H2S1 579 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 NELFAQ9H3P2 528 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 SIAEQ9HAT2 523 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 CLN6Q9NWW5 311 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 ZNF226Q9NYT6 803 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 UGT2A1Q9Y4X1 527 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 A0A096LPE4 126 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 A0A1W2PPZ6 126 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 CLEC18AA5D8T8 446 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 H3BSA7 217 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 SEC14L2O76054 403 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 GLCEO94923 617 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 MSR1P21757 451 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 P2RX3P56373 397 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 UBE2NP61088 152 aaKnown RBP13.53□□□□□ -0.24
DDB1-216ENST00000539739 HSF2Q03933 536 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 TFF3Q07654 80 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 TSC22D1Q15714 1073 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 SLC25A30Q5SVS4 291 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 LCN1P1Q5VSP4 162 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 AADACL4Q5VUY2 407 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 KLHL24Q6TFL4 600 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 CLEC18BQ6UXF7 455 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 FOXL2NBQ6ZUU3 175 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 P2RY8Q86VZ1 359 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 C17orf78Q8N4C9 275 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 CLEC18CQ8NCF0 446 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 BBS1Q8NFJ9 593 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 OR10H5Q8NGA6 315 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 RHOXF1Q8NHV9 184 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 BCL2L2Q92843 193 aaPredicted RBP13.53□□□□□ -0.24
DDB1-216ENST00000539739 RFKQ969G6 155 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 MARVELD3Q96A59 401 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 BOD1Q96IK1 185 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 FOXN4Q96NZ1 517 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 ACTR6Q9GZN1 396 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 POLE4Q9NR33 117 aa13.53□□□□□ -0.24
DDB1-216ENST00000539739 SLC22A31A6NKX4 558 aa13.52□□□□□ -0.25
DDB1-216ENST00000539739 GNAO1P09471 354 aa13.52□□□□□ -0.25
DDB1-216ENST00000539739 PPP3CBP16298 524 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms