RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 PGCP20142 388 aa12.61□□□□□ -0.39
UBE3B-210ENST00000539599 HSD11B2P80365 405 aa12.61□□□□□ -0.39
UBE3B-210ENST00000539599 SGCBQ16585 318 aa12.61□□□□□ -0.39
UBE3B-210ENST00000539599 SLC18B1Q6NT16 456 aa12.61□□□□□ -0.39
UBE3B-210ENST00000539599 SLC36A1Q7Z2H8 476 aa12.61□□□□□ -0.39
UBE3B-210ENST00000539599 COQ8AQ8NI60 647 aa12.61□□□□□ -0.39
UBE3B-210ENST00000539599 SOX7Q9BT81 388 aa12.61□□□□□ -0.39
UBE3B-210ENST00000539599 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.61□□□□□ -0.39
UBE3B-210ENST00000539599 CPAMD8Q8IZJ3 1885 aa12.61□□□□□ -0.39
UBE3B-210ENST00000539599 OR2M5A3KFT3 312 aa12.61□□□□□ -0.39
UBE3B-210ENST00000539599 TMEM235A6NFC5 223 aa12.61□□□□□ -0.39
UBE3B-210ENST00000539599 KLK2P20151 261 aa12.61□□□□□ -0.39
UBE3B-210ENST00000539599 POU3F1Q03052 451 aaPredicted RBP12.61□□□□□ -0.39
UBE3B-210ENST00000539599 RASGEF1BQ0VAM2 473 aa12.61□□□□□ -0.39
UBE3B-210ENST00000539599 C4orf46Q504U0 113 aa12.61□□□□□ -0.39
UBE3B-210ENST00000539599 EMC4Q5J8M3 183 aa12.61□□□□□ -0.39
UBE3B-210ENST00000539599 SLC29A4Q7RTT9 530 aa12.61□□□□□ -0.39
UBE3B-210ENST00000539599 OR1N1Q8NGS0 311 aa12.61□□□□□ -0.39
UBE3B-210ENST00000539599 RNF128Q8TEB7 428 aa12.61□□□□□ -0.39
UBE3B-210ENST00000539599 CMTM3Q96MX0 182 aa12.61□□□□□ -0.39
UBE3B-210ENST00000539599 COPS7AQ9UBW8 275 aa12.61□□□□□ -0.39
UBE3B-210ENST00000539599 ETV7Q9Y603 341 aa12.61□□□□□ -0.39
UBE3B-210ENST00000539599 MTCH2Q9Y6C9 303 aa12.61□□□□□ -0.39
UBE3B-210ENST00000539599 A0A1W2PPL8 197 aa12.6□□□□□ -0.39
UBE3B-210ENST00000539599 LMO7DNF2Z398 122 aa12.6□□□□□ -0.39
UBE3B-210ENST00000539599 AANATQ16613 207 aa12.6□□□□□ -0.39
UBE3B-210ENST00000539599 LIN54Q6MZP7 749 aa12.6□□□□□ -0.39
UBE3B-210ENST00000539599 SLC25A45Q8N413 288 aa12.6□□□□□ -0.39
UBE3B-210ENST00000539599 LRRC20Q8TCA0 184 aa12.6□□□□□ -0.39
UBE3B-210ENST00000539599 TXNIPQ9H3M7 391 aa12.6□□□□□ -0.39
UBE3B-210ENST00000539599 EXO5Q9H790 373 aa12.6□□□□□ -0.39
UBE3B-210ENST00000539599 FGF21Q9NSA1 209 aa12.6□□□□□ -0.39
UBE3B-210ENST00000539599 SUSD2Q9UGT4 822 aa12.6□□□□□ -0.39
UBE3B-210ENST00000539599 BLACEA4D250 179 aa12.6□□□□□ -0.39
UBE3B-210ENST00000539599 NAP1L6A6NFF2 107 aa12.6□□□□□ -0.39
UBE3B-210ENST00000539599 WIPF3A6NGB9 483 aa12.6□□□□□ -0.39
UBE3B-210ENST00000539599 LGALS8O00214 317 aa12.6□□□□□ -0.39
UBE3B-210ENST00000539599 CCSO14618 274 aa12.6□□□□□ -0.39
UBE3B-210ENST00000539599 SULT1B1O43704 296 aa12.6□□□□□ -0.39
UBE3B-210ENST00000539599 FADS1O60427 444 aa12.6□□□□□ -0.39
UBE3B-210ENST00000539599 NPIPB7O75200 414 aa12.6□□□□□ -0.39
UBE3B-210ENST00000539599 POLR2HP52434 150 aaKnown RBP12.6□□□□□ -0.39
UBE3B-210ENST00000539599 NR0B2Q15466 257 aa12.6□□□□□ -0.39
UBE3B-210ENST00000539599 SCGB2B2Q4G0G5 96 aa12.6□□□□□ -0.39
UBE3B-210ENST00000539599 SMUG1Q53HV7 270 aa12.6□□□□□ -0.39
UBE3B-210ENST00000539599 GVQW1Q8N7I0 195 aa12.6□□□□□ -0.39
UBE3B-210ENST00000539599 OR4D6Q8NGJ1 314 aa12.6□□□□□ -0.39
UBE3B-210ENST00000539599 SLC25A28Q96A46 364 aa12.6□□□□□ -0.39
UBE3B-210ENST00000539599 PELOQ9BRX2 385 aaKnown RBP12.6□□□□□ -0.39
UBE3B-210ENST00000539599 B3GNT4Q9C0J1 378 aa12.6□□□□□ -0.39
UBE3B-210ENST00000539599 POFUT1Q9H488 388 aa12.6□□□□□ -0.39
UBE3B-210ENST00000539599 TMEM14AQ9Y6G1 99 aa12.6□□□□□ -0.39
UBE3B-210ENST00000539599 LOC107986453A0A1B0GWG9 222 aa12.59□□□□□ -0.39
UBE3B-210ENST00000539599 MCRIP1C9JLW8 97 aa12.59□□□□□ -0.39
UBE3B-210ENST00000539599 MS4A18H0YCH9 400 aa12.59□□□□□ -0.39
UBE3B-210ENST00000539599 KCNAB3O43448 404 aa12.59□□□□□ -0.39
UBE3B-210ENST00000539599 PRAF2O60831 178 aa12.59□□□□□ -0.39
UBE3B-210ENST00000539599 IFNA7P01567 189 aa12.59□□□□□ -0.39
UBE3B-210ENST00000539599 SLC2A1P11166 492 aa12.59□□□□□ -0.39
UBE3B-210ENST00000539599 PRSS3P35030 304 aa12.59□□□□□ -0.39
UBE3B-210ENST00000539599 SLC6A8P48029 635 aa12.59□□□□□ -0.39
UBE3B-210ENST00000539599 RIDAP52758 137 aaKnown RBP12.59□□□□□ -0.39
UBE3B-210ENST00000539599 ARPC4P59998 168 aa12.59□□□□□ -0.39
UBE3B-210ENST00000539599 SORDQ00796 357 aa12.59□□□□□ -0.39
UBE3B-210ENST00000539599 RBMS2Q15434 407 aaKnown RBP12.59□□□□□ -0.39
UBE3B-210ENST00000539599 RSPO4Q2I0M5 234 aaPredicted RBP12.59□□□□□ -0.39
UBE3B-210ENST00000539599 MS4A18Q3C1V0 323 aa12.59□□□□□ -0.39
UBE3B-210ENST00000539599 C11orf88Q6PI97 169 aa12.59□□□□□ -0.39
UBE3B-210ENST00000539599 CD163Q86VB7 1156 aa12.59□□□□□ -0.39
UBE3B-210ENST00000539599 C17orf82Q86X59 251 aaPredicted RBP12.59□□□□□ -0.39
UBE3B-210ENST00000539599 OR13C3Q8NGS6 347 aa12.59□□□□□ -0.39
UBE3B-210ENST00000539599 TNFAIP8L1Q8WVP5 186 aa12.59□□□□□ -0.39
UBE3B-210ENST00000539599 MMACHCQ9Y4U1 282 aa12.59□□□□□ -0.39
UBE3B-210ENST00000539599 LOC100289279A0A1B0GTE1 492 aa12.59□□□□□ -0.39
UBE3B-210ENST00000539599 A8MVM7 634 aa12.59□□□□□ -0.39
UBE3B-210ENST00000539599 SLC17A2O00624 439 aa12.59□□□□□ -0.39
UBE3B-210ENST00000539599 PIAS2O75928 621 aa12.59□□□□□ -0.39
UBE3B-210ENST00000539599 DXOO77932 396 aaKnown RBP12.59□□□□□ -0.39
UBE3B-210ENST00000539599 AHSA1O95433 338 aa12.59□□□□□ -0.39
UBE3B-210ENST00000539599 IGF2P01344 180 aa12.59□□□□□ -0.39
UBE3B-210ENST00000539599 NFYAP23511 347 aaPredicted RBP12.59□□□□□ -0.39
UBE3B-210ENST00000539599 LRRC37A5PQ49AS3 106 aa12.59□□□□□ -0.39
UBE3B-210ENST00000539599 STEAP1BQ6NZ63 245 aa12.59□□□□□ -0.39
UBE3B-210ENST00000539599 TMEM65Q6PI78 240 aa12.59□□□□□ -0.39
UBE3B-210ENST00000539599 DAZLQ92904 295 aaKnown RBP12.59□□□□□ -0.39
UBE3B-210ENST00000539599 PTGES2Q9H7Z7 377 aa12.59□□□□□ -0.39
UBE3B-210ENST00000539599 AKIRIN1Q9H9L7 192 aaPredicted RBP12.59□□□□□ -0.39
UBE3B-210ENST00000539599 DIABLOQ9NR28 239 aa12.59□□□□□ -0.39
UBE3B-210ENST00000539599 RDH8Q9NYR8 311 aa12.59□□□□□ -0.39
UBE3B-210ENST00000539599 OPN4Q9UHM6 478 aa12.59□□□□□ -0.39
UBE3B-210ENST00000539599 MRTO4Q9UKD2 239 aaKnown RBP12.59□□□□□ -0.39
UBE3B-210ENST00000539599 SLC5A6Q9Y289 635 aa12.59□□□□□ -0.39
UBE3B-210ENST00000539599 A0A1W2PPC1 479 aa12.58□□□□□ -0.39
UBE3B-210ENST00000539599 HTR2CP28335 458 aa12.58□□□□□ -0.39
UBE3B-210ENST00000539599 RNF4P78317 190 aa12.58□□□□□ -0.39
UBE3B-210ENST00000539599 BEX5Q5H9J7 111 aa12.58□□□□□ -0.39
UBE3B-210ENST00000539599 TEX30Q5JUR7 227 aa12.58□□□□□ -0.39
UBE3B-210ENST00000539599 OR52W1Q6IF63 320 aa12.58□□□□□ -0.39
UBE3B-210ENST00000539599 COX15Q7KZN9 410 aa12.58□□□□□ -0.39
UBE3B-210ENST00000539599 CATSPERDQ86XM0 798 aa12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms