RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 ICOSLGO75144 302 aa11.32□□□□□ -0.6
SFSWAP-208ENST00000539506 SLC25A12O75746 678 aa11.32□□□□□ -0.6
SFSWAP-208ENST00000539506 IL33O95760 270 aa11.32□□□□□ -0.6
SFSWAP-208ENST00000539506 AMY2AP04746 511 aa11.32□□□□□ -0.6
SFSWAP-208ENST00000539506 CPN1P15169 458 aa11.32□□□□□ -0.6
SFSWAP-208ENST00000539506 TACR3P29371 465 aa11.32□□□□□ -0.6
SFSWAP-208ENST00000539506 SDHAP31040 664 aa11.32□□□□□ -0.6
SFSWAP-208ENST00000539506 GMFBP60983 142 aa11.32□□□□□ -0.6
SFSWAP-208ENST00000539506 NR0B2Q15466 257 aa11.32□□□□□ -0.6
SFSWAP-208ENST00000539506 SLC35F3Q8IY50 421 aa11.32□□□□□ -0.6
SFSWAP-208ENST00000539506 OR10Z1Q8NGY1 313 aa11.32□□□□□ -0.6
SFSWAP-208ENST00000539506 ADIPOR1Q96A54 375 aa11.32□□□□□ -0.6
SFSWAP-208ENST00000539506 C12orf57Q99622 126 aa11.32□□□□□ -0.6
SFSWAP-208ENST00000539506 VRK1Q99986 396 aaPredicted RBP11.32□□□□□ -0.6
SFSWAP-208ENST00000539506 CYB5R1Q9UHQ9 305 aa11.32□□□□□ -0.6
SFSWAP-208ENST00000539506 C13orf42A0A1B0GVH6 325 aa11.31□□□□□ -0.6
SFSWAP-208ENST00000539506 ZNF264O43296 627 aa11.31□□□□□ -0.6
SFSWAP-208ENST00000539506 AKR1C3P42330 323 aa11.31□□□□□ -0.6
SFSWAP-208ENST00000539506 ATP1B3P54709 279 aa11.31□□□□□ -0.6
SFSWAP-208ENST00000539506 FOXL2P58012 376 aa11.31□□□□□ -0.6
SFSWAP-208ENST00000539506 ZNF117Q03924 483 aa11.31□□□□□ -0.6
SFSWAP-208ENST00000539506 IKZF1Q13422 519 aa11.31□□□□□ -0.6
SFSWAP-208ENST00000539506 C2orf76Q3KRA6 126 aa11.31□□□□□ -0.6
SFSWAP-208ENST00000539506 SLC16A9Q7RTY1 509 aa11.31□□□□□ -0.6
SFSWAP-208ENST00000539506 JAZF1Q86VZ6 243 aa11.31□□□□□ -0.6
SFSWAP-208ENST00000539506 CDC20BQ86Y33 519 aa11.31□□□□□ -0.6
SFSWAP-208ENST00000539506 PAQR8Q8TEZ7 354 aa11.31□□□□□ -0.6
SFSWAP-208ENST00000539506 CMBLQ96DG6 245 aa11.31□□□□□ -0.6
SFSWAP-208ENST00000539506 LCORQ96JN0 433 aaPredicted RBP11.31□□□□□ -0.6
SFSWAP-208ENST00000539506 CMSS1Q9BQ75 279 aaKnown RBP11.31□□□□□ -0.6
SFSWAP-208ENST00000539506 DHCR7Q9UBM7 475 aaKnown RBP11.31□□□□□ -0.6
SFSWAP-208ENST00000539506 NAP1L6A6NFF2 107 aa11.31□□□□□ -0.6
SFSWAP-208ENST00000539506 TMEM200CA6NKL6 621 aa11.31□□□□□ -0.6
SFSWAP-208ENST00000539506 DDAH2O95865 285 aa11.31□□□□□ -0.6
SFSWAP-208ENST00000539506 BLKP51451 505 aa11.31□□□□□ -0.6
SFSWAP-208ENST00000539506 SLC25A1P53007 311 aa11.31□□□□□ -0.6
SFSWAP-208ENST00000539506 BAMBIQ13145 260 aa11.31□□□□□ -0.6
SFSWAP-208ENST00000539506 RAB30Q15771 203 aa11.31□□□□□ -0.6
SFSWAP-208ENST00000539506 DEFB133Q30KQ1 61 aa11.31□□□□□ -0.6
SFSWAP-208ENST00000539506 ELFN2Q5R3F8 820 aa11.31□□□□□ -0.6
SFSWAP-208ENST00000539506 TTLL10Q6ZVT0 673 aa11.31□□□□□ -0.6
SFSWAP-208ENST00000539506 FAM46BQ96A09 425 aa11.31□□□□□ -0.6
SFSWAP-208ENST00000539506 FBXO17Q96EF6 278 aa11.31□□□□□ -0.6
SFSWAP-208ENST00000539506 PLEKHA1Q9HB21 404 aa11.31□□□□□ -0.6
SFSWAP-208ENST00000539506 LAMP5Q9UJQ1 280 aa11.31□□□□□ -0.6
SFSWAP-208ENST00000539506 OR6C76A6NM76 312 aa11.31□□□□□ -0.6
SFSWAP-208ENST00000539506 CTAG2O75638 210 aa11.31□□□□□ -0.6
SFSWAP-208ENST00000539506 IGKV3-11P04433 115 aa11.31□□□□□ -0.6
SFSWAP-208ENST00000539506 OR4E1P0C645 316 aa11.31□□□□□ -0.6
SFSWAP-208ENST00000539506 PNMTP11086 282 aa11.31□□□□□ -0.6
SFSWAP-208ENST00000539506 HPGDP15428 266 aa11.31□□□□□ -0.6
SFSWAP-208ENST00000539506 PPICP45877 212 aa11.31□□□□□ -0.6
SFSWAP-208ENST00000539506 CAPZA1P52907 286 aa11.31□□□□□ -0.6
SFSWAP-208ENST00000539506 UBXN2BQ14CS0 331 aa11.31□□□□□ -0.6
SFSWAP-208ENST00000539506 Q499Y3 187 aa11.31□□□□□ -0.6
SFSWAP-208ENST00000539506 STEAP1BQ6NZ63 245 aa11.31□□□□□ -0.6
SFSWAP-208ENST00000539506 FAM220AQ7Z4H9 259 aa11.31□□□□□ -0.6
SFSWAP-208ENST00000539506 ZNF721Q8TF20 911 aa11.31□□□□□ -0.6
SFSWAP-208ENST00000539506 USB1Q9BQ65 265 aaKnown RBP11.31□□□□□ -0.6
SFSWAP-208ENST00000539506 SYT4Q9H2B2 425 aa11.31□□□□□ -0.6
SFSWAP-208ENST00000539506 PRODH2Q9UF12 536 aa11.31□□□□□ -0.6
SFSWAP-208ENST00000539506 ASXL3Q9C0F0 2248 aa11.3□□□□□ -0.6
SFSWAP-208ENST00000539506 IGHV1OR15-9A0A0B4J2B8 117 aa11.3□□□□□ -0.6
SFSWAP-208ENST00000539506 GGT3PA6NGU5 568 aa11.3□□□□□ -0.6
SFSWAP-208ENST00000539506 OR5H14A6NHG9 310 aa11.3□□□□□ -0.6
SFSWAP-208ENST00000539506 ZNF98A6NK75 572 aa11.3□□□□□ -0.6
SFSWAP-208ENST00000539506 F5H0A9 414 aaPredicted RBP11.3□□□□□ -0.6
SFSWAP-208ENST00000539506 SCDO00767 359 aa11.3□□□□□ -0.6
SFSWAP-208ENST00000539506 AGPAT2O15120 278 aa11.3□□□□□ -0.6
SFSWAP-208ENST00000539506 FADS1O60427 444 aa11.3□□□□□ -0.6
SFSWAP-208ENST00000539506 TXNDC12O95881 172 aa11.3□□□□□ -0.6
SFSWAP-208ENST00000539506 NFYBP25208 207 aa11.3□□□□□ -0.6
SFSWAP-208ENST00000539506 MPGP29372 298 aa11.3□□□□□ -0.6
SFSWAP-208ENST00000539506 KCNJ3P48549 501 aa11.3□□□□□ -0.6
SFSWAP-208ENST00000539506 ALKBH1Q13686 389 aaKnown RBP11.3□□□□□ -0.6
SFSWAP-208ENST00000539506 MEP1BQ16820 701 aa11.3□□□□□ -0.6
SFSWAP-208ENST00000539506 MOGAT2Q3SYC2 334 aa11.3□□□□□ -0.6
SFSWAP-208ENST00000539506 LY6G6FQ5SQ64 297 aa11.3□□□□□ -0.6
SFSWAP-208ENST00000539506 RAB12Q6IQ22 244 aa11.3□□□□□ -0.6
SFSWAP-208ENST00000539506 C3orf33Q6P1S2 294 aa11.3□□□□□ -0.6
SFSWAP-208ENST00000539506 BAIAP2L2Q6UXY1 529 aa11.3□□□□□ -0.6
SFSWAP-208ENST00000539506 OR2W3Q7Z3T1 314 aa11.3□□□□□ -0.6
SFSWAP-208ENST00000539506 MARCH3Q86UD3 253 aa11.3□□□□□ -0.6
SFSWAP-208ENST00000539506 TMEM200AQ86VY9 491 aa11.3□□□□□ -0.6
SFSWAP-208ENST00000539506 PUSL1Q8N0Z8 303 aaKnown RBP11.3□□□□□ -0.6
SFSWAP-208ENST00000539506 PRSS35Q8N3Z0 413 aa11.3□□□□□ -0.6
SFSWAP-208ENST00000539506 ADAM19Q9H013 955 aa11.3□□□□□ -0.6
SFSWAP-208ENST00000539506 APMAPQ9HDC9 416 aa11.3□□□□□ -0.6
SFSWAP-208ENST00000539506 KCNG2Q9UJ96 466 aa11.3□□□□□ -0.6
SFSWAP-208ENST00000539506 BLACEA4D250 179 aa11.3□□□□□ -0.6
SFSWAP-208ENST00000539506 H7C417 338 aa11.3□□□□□ -0.6
SFSWAP-208ENST00000539506 NME1P15531 152 aaKnown RBP11.3□□□□□ -0.6
SFSWAP-208ENST00000539506 RAB3AP20336 220 aa11.3□□□□□ -0.6
SFSWAP-208ENST00000539506 CSRP1P21291 193 aaKnown RBP11.3□□□□□ -0.6
SFSWAP-208ENST00000539506 VAMP1P23763 118 aa11.3□□□□□ -0.6
SFSWAP-208ENST00000539506 BDKRB2P30411 391 aa11.3□□□□□ -0.6
SFSWAP-208ENST00000539506 PRSS3P35030 304 aa11.3□□□□□ -0.6
SFSWAP-208ENST00000539506 SKP1P63208 163 aa11.3□□□□□ -0.6
SFSWAP-208ENST00000539506 ZP2Q05996 745 aa11.3□□□□□ -0.6
SFSWAP-208ENST00000539506 OLFML2AQ68BL7 652 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms