RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 YWHAGP61981 247 aaKnown RBP eCLIP1.86□□□□□ -2.11
CCDC7-209ENST00000539197 ZNF77Q15935 545 aa1.86□□□□□ -2.11
CCDC7-209ENST00000539197 ORMDL2Q53FV1 153 aa1.86□□□□□ -2.11
CCDC7-209ENST00000539197 METTL21CQ5VZV1 264 aa1.86□□□□□ -2.11
CCDC7-209ENST00000539197 UNQ9165/PRO28630Q6UXU0 137 aa1.86□□□□□ -2.11
CCDC7-209ENST00000539197 PPP1R42Q7Z4L9 355 aa1.86□□□□□ -2.11
CCDC7-209ENST00000539197 SNX20Q7Z614 316 aa1.86□□□□□ -2.11
CCDC7-209ENST00000539197 TBC1D21Q8IYX1 336 aa1.86□□□□□ -2.11
CCDC7-209ENST00000539197 STEAP2Q8NFT2 490 aa1.86□□□□□ -2.11
CCDC7-209ENST00000539197 OR4K5Q8NGD3 323 aa1.86□□□□□ -2.11
CCDC7-209ENST00000539197 OR13G1Q8NGZ3 307 aa1.86□□□□□ -2.11
CCDC7-209ENST00000539197 NPTNQ9Y639 398 aa1.86□□□□□ -2.11
CCDC7-209ENST00000539197 ATP10AO60312 1499 aa1.86□□□□□ -2.11
CCDC7-209ENST00000539197 SCN1AP35498 2009 aa1.85□□□□□ -2.11
CCDC7-209ENST00000539197 TRAV6A0A075B6T7 132 aa1.85□□□□□ -2.11
CCDC7-209ENST00000539197 IGKV2-24A0A0C4DH68 120 aa1.85□□□□□ -2.11
CCDC7-209ENST00000539197 CLRN2A0PK11 232 aa1.85□□□□□ -2.11
CCDC7-209ENST00000539197 OR6C74A6NCV1 312 aa1.85□□□□□ -2.11
CCDC7-209ENST00000539197 GCM2O75603 506 aaPredicted RBP1.85□□□□□ -2.11
CCDC7-209ENST00000539197 F2RP25116 425 aa1.85□□□□□ -2.11
CCDC7-209ENST00000539197 ZNF138P52744 262 aa1.85□□□□□ -2.11
CCDC7-209ENST00000539197 UBE2NP61088 152 aaKnown RBP1.85□□□□□ -2.11
CCDC7-209ENST00000539197 ACTG2P63267 376 aa1.85□□□□□ -2.11
CCDC7-209ENST00000539197 IRX3P78415 501 aaPredicted RBP1.85□□□□□ -2.11
CCDC7-209ENST00000539197 FLI1Q01543 452 aaPredicted RBP1.85□□□□□ -2.11
CCDC7-209ENST00000539197 PON2Q15165 354 aa1.85□□□□□ -2.11
CCDC7-209ENST00000539197 LRRC23Q53EV4 343 aaPredicted RBP1.85□□□□□ -2.11
CCDC7-209ENST00000539197 PLET1Q6UQ28 207 aa1.85□□□□□ -2.11
CCDC7-209ENST00000539197 EFL1Q7Z2Z2 1120 aaKnown RBP1.85□□□□□ -2.11
CCDC7-209ENST00000539197 PDIK1LQ8N165 341 aa1.85□□□□□ -2.11
CCDC7-209ENST00000539197 SERPINB12Q96P63 405 aa1.85□□□□□ -2.11
CCDC7-209ENST00000539197 TIMM17AQ99595 171 aa1.85□□□□□ -2.11
CCDC7-209ENST00000539197 C1orf198Q9H425 327 aa1.85□□□□□ -2.11
CCDC7-209ENST00000539197 SGK2Q9HBY8 427 aa1.85□□□□□ -2.11
CCDC7-209ENST00000539197 NT5MQ9NPB1 228 aa1.85□□□□□ -2.11
CCDC7-209ENST00000539197 IKZF2Q9UKS7 526 aa1.85□□□□□ -2.11
CCDC7-209ENST00000539197 A0A0U1RQV1 116 aa1.84□□□□□ -2.11
CCDC7-209ENST00000539197 BTBD17A6NE02 478 aa1.84□□□□□ -2.11
CCDC7-209ENST00000539197 GPR89AB7ZAQ6 455 aa1.84□□□□□ -2.11
CCDC7-209ENST00000539197 FGGP02679 453 aa1.84□□□□□ -2.11
CCDC7-209ENST00000539197 ZNF688P0C7X2 276 aa1.84□□□□□ -2.11
CCDC7-209ENST00000539197 GPR89BP0CG08 455 aa1.84□□□□□ -2.11
CCDC7-209ENST00000539197 ATP1B2P14415 290 aaPredicted RBP1.84□□□□□ -2.11
CCDC7-209ENST00000539197 KCNJ2P63252 427 aa1.84□□□□□ -2.11
CCDC7-209ENST00000539197 TGFBIQ15582 683 aa1.84□□□□□ -2.11
CCDC7-209ENST00000539197 MAJINQ3KP22 176 aa1.84□□□□□ -2.11
CCDC7-209ENST00000539197 RGS9BPQ6ZS82 235 aa1.84□□□□□ -2.11
CCDC7-209ENST00000539197 SLC25A48Q6ZT89 311 aaKnown RBP1.84□□□□□ -2.11
CCDC7-209ENST00000539197 CNPY4Q8N129 248 aa1.84□□□□□ -2.11
CCDC7-209ENST00000539197 LRRC75A-AS1Q8N1F1 130 aa1.84□□□□□ -2.11
CCDC7-209ENST00000539197 MIR7-3HGQ8N6C7 128 aa1.84□□□□□ -2.11
CCDC7-209ENST00000539197 METTL13Q8N6R0 699 aa1.84□□□□□ -2.11
CCDC7-209ENST00000539197 HSD17B11Q8NBQ5 300 aa1.84□□□□□ -2.11
CCDC7-209ENST00000539197 OR4F6Q8NGB9 312 aa1.84□□□□□ -2.11
CCDC7-209ENST00000539197 OR52M1Q8NGK5 317 aa1.84□□□□□ -2.11
CCDC7-209ENST00000539197 SHC3Q92529 594 aa1.84□□□□□ -2.11
CCDC7-209ENST00000539197 SEH1LQ96EE3 360 aa1.84□□□□□ -2.11
CCDC7-209ENST00000539197 NPY6RQ99463 290 aa1.84□□□□□ -2.11
CCDC7-209ENST00000539197 CRACR2AQ9BSW2 395 aa1.84□□□□□ -2.11
CCDC7-209ENST00000539197 VCX2Q9H322 139 aa1.84□□□□□ -2.11
CCDC7-209ENST00000539197 ETNK2Q9NVF9 386 aa1.84□□□□□ -2.11
CCDC7-209ENST00000539197 SIGLEC9Q9Y336 463 aa1.84□□□□□ -2.11
CCDC7-209ENST00000539197 GOLT1BQ9Y3E0 138 aa1.84□□□□□ -2.11
CCDC7-209ENST00000539197 SDK2Q58EX2 2172 aa1.83□□□□□ -2.12
CCDC7-209ENST00000539197 IGHV1OR15-9A0A0B4J2B8 117 aa1.83□□□□□ -2.12
CCDC7-209ENST00000539197 CENPVL3A0A0U1RRI6 287 aa1.83□□□□□ -2.12
CCDC7-209ENST00000539197 CDC7O00311 574 aa1.83□□□□□ -2.12
CCDC7-209ENST00000539197 DPM1O60762 260 aa1.83□□□□□ -2.12
CCDC7-209ENST00000539197 EEDO75530 441 aaKnown RBP1.83□□□□□ -2.12
CCDC7-209ENST00000539197 TMEM50AO95807 157 aa1.83□□□□□ -2.12
CCDC7-209ENST00000539197 CD74P04233 296 aa1.83□□□□□ -2.12
CCDC7-209ENST00000539197 PRPHP41219 470 aa1.83□□□□□ -2.12
CCDC7-209ENST00000539197 VSX2P58304 361 aaPredicted RBP1.83□□□□□ -2.12
CCDC7-209ENST00000539197 SEC61GP60059 68 aa1.83□□□□□ -2.12
CCDC7-209ENST00000539197 UBE2HP62256 183 aa1.83□□□□□ -2.12
CCDC7-209ENST00000539197 MRPS22P82650 360 aaKnown RBP1.83□□□□□ -2.12
CCDC7-209ENST00000539197 ZNF616Q08AN1 781 aa1.83□□□□□ -2.12
CCDC7-209ENST00000539197 CDH17Q12864 832 aa1.83□□□□□ -2.12
CCDC7-209ENST00000539197 PPIL2Q13356 520 aa1.83□□□□□ -2.12
CCDC7-209ENST00000539197 CASC1Q6TDU7 716 aa1.83□□□□□ -2.12
CCDC7-209ENST00000539197 WDFY1Q8IWB7 410 aa1.83□□□□□ -2.12
CCDC7-209ENST00000539197 OR1L6Q8NGR2 347 aa1.83□□□□□ -2.12
CCDC7-209ENST00000539197 PIFOQ8TCI5 191 aa1.83□□□□□ -2.12
CCDC7-209ENST00000539197 SLC25A46Q96AG3 418 aa1.83□□□□□ -2.12
CCDC7-209ENST00000539197 TEKT3Q9BXF9 490 aa1.83□□□□□ -2.12
CCDC7-209ENST00000539197 FRMD8P1Q9BZ68 369 aaPredicted RBP1.83□□□□□ -2.12
CCDC7-209ENST00000539197 GORASP2Q9H8Y8 452 aa1.83□□□□□ -2.12
CCDC7-209ENST00000539197 FN3KRPQ9HA64 309 aa1.83□□□□□ -2.12
CCDC7-209ENST00000539197 CLEC4AQ9UMR7 237 aa1.83□□□□□ -2.12
CCDC7-209ENST00000539197 ING4Q9UNL4 249 aa1.83□□□□□ -2.12
CCDC7-209ENST00000539197 TNS2Q63HR2 1409 aa1.83□□□□□ -2.12
CCDC7-209ENST00000539197 PCNX2A6NKB5 2137 aa1.82□□□□□ -2.12
CCDC7-209ENST00000539197 ADGRL1O94910 1474 aa1.82□□□□□ -2.12
CCDC7-209ENST00000539197 SHROOM3Q8TF72 1996 aa1.82□□□□□ -2.12
CCDC7-209ENST00000539197 ZNF816-ZNF321PA0A0X1KG74 233 aa1.82□□□□□ -2.12
CCDC7-209ENST00000539197 SPECC1L-ADORA2AF8WAN1 911 aa1.82□□□□□ -2.12
CCDC7-209ENST00000539197 LGALS9O00182 355 aa1.82□□□□□ -2.12
CCDC7-209ENST00000539197 MPHOSPH10O00566 681 aaKnown RBP1.82□□□□□ -2.12
CCDC7-209ENST00000539197 CHST10O43529 356 aa1.82□□□□□ -2.12
CCDC7-209ENST00000539197 SPAG6O75602 509 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms