RNA–Protein interactions for RNA: ENST00000538708.5

PTPRB-204, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 1 (best) BASIC

Gene PTPRB, Length 5,839 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-204ENST00000538708 OR2A1Q8NGT9 310 aa8.62□□□□□ -1.03
PTPRB-204ENST00000538708 TINAGL1Q9GZM7 467 aaPredicted RBP8.62□□□□□ -1.03
PTPRB-204ENST00000538708 M0R135 149 aa8.62□□□□□ -1.03
PTPRB-204ENST00000538708 LGI1O95970 557 aa8.62□□□□□ -1.03
PTPRB-204ENST00000538708 FTH1P19P0C7X4 201 aa8.62□□□□□ -1.03
PTPRB-204ENST00000538708 TNFRSF1AP19438 455 aa8.62□□□□□ -1.03
PTPRB-204ENST00000538708 GPR12P47775 334 aa8.62□□□□□ -1.03
PTPRB-204ENST00000538708 DAPP51397 102 aa8.62□□□□□ -1.03
PTPRB-204ENST00000538708 HFEQ30201 348 aa8.62□□□□□ -1.03
PTPRB-204ENST00000538708 METAP1DQ6UB28 335 aaPredicted RBP8.62□□□□□ -1.03
PTPRB-204ENST00000538708 BPIFB2Q8N4F0 458 aa8.62□□□□□ -1.03
PTPRB-204ENST00000538708 OR10G3Q8NGC4 313 aa8.62□□□□□ -1.03
PTPRB-204ENST00000538708 ZNF799Q96GE5 643 aa8.62□□□□□ -1.03
PTPRB-204ENST00000538708 NLKQ9UBE8 527 aa8.62□□□□□ -1.03
PTPRB-204ENST00000538708 P2RX6O15547 441 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 LYRM1O43325 122 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 IL1AP01583 271 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 CD3EP07766 207 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 SP9P0CG40 484 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 HTR2AP28223 471 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 PCSK6P29122 969 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 THBS3P49746 956 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 RPS16P62249 146 aaKnown RBP8.61□□□□□ -1.03
PTPRB-204ENST00000538708 BTNL3Q6UXE8 466 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 NKAIN4Q8IVV8 208 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 GABRG1Q8N1C3 465 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 S1PR5Q9H228 398 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 MED29Q9NX70 200 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 ASIC5Q9NY37 505 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 LRP5LA4QPB2 252 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 YIF1AO95070 293 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 RAB40ALP0C0E4 278 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 NAGAP17050 411 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 F2RP25116 425 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 ARNTP27540 789 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 SDHAP31040 664 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 TRIM23P36406 574 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 CLDN12P56749 244 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 EMC4Q5J8M3 183 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 METTL11BQ5VVY1 283 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 NKAIN3Q8N8D7 197 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 GDPD1Q8N9F7 314 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 M1APQ8TC57 530 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 RAB40AQ8WXH6 277 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 TMEM106AQ96A25 262 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 PKMYT1Q99640 499 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 SLC26A1Q9H2B4 701 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 C21orf140B9A014 251 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 CCL21O00585 134 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 BHLHE40O14503 412 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 SOD1P00441 154 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 YIF1BQ5BJH7 314 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 TMEM108Q6UXF1 575 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 NOXO1Q8NFA2 376 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 KIRREL1Q96J84 757 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 MYOZ1Q9NP98 299 aaPredicted RBP8.61□□□□□ -1.03
PTPRB-204ENST00000538708 TCFL5Q9UL49 500 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 NRASP01111 189 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 HNF1AP20823 631 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 ACVR1Q04771 509 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 ZNF91Q05481 1191 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 PMPCAQ10713 525 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 SPNS3Q6ZMD2 512 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 BHLHA15Q7RTS1 189 aaPredicted RBP8.61□□□□□ -1.03
PTPRB-204ENST00000538708 PLPP7Q8NBV4 271 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 GPR119Q8TDV5 335 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 FBXW5Q969U6 566 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 TMEM246Q9BRR3 403 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 ZNF696Q9H7X3 374 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 C1orf123Q9NWV4 160 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 LOXHD1Q8IVV2 1947 aa8.61□□□□□ -1.03
PTPRB-204ENST00000538708 MEIKINA0A087WXM9 373 aa8.6□□□□□ -1.03
PTPRB-204ENST00000538708 SERTM1A2A2V5 107 aa8.6□□□□□ -1.03
PTPRB-204ENST00000538708 OR5H15A6NDH6 313 aa8.6□□□□□ -1.03
PTPRB-204ENST00000538708 NUDT19A8MXV4 375 aa8.6□□□□□ -1.03
PTPRB-204ENST00000538708 TOX3O15405 576 aaPredicted RBP8.6□□□□□ -1.03
PTPRB-204ENST00000538708 GABRA1P14867 456 aa8.6□□□□□ -1.03
PTPRB-204ENST00000538708 NKX6-1P78426 367 aaPredicted RBP8.6□□□□□ -1.03
PTPRB-204ENST00000538708 RPL18Q07020 188 aaKnown RBP8.6□□□□□ -1.03
PTPRB-204ENST00000538708 ZNF385BQ569K4 471 aa8.6□□□□□ -1.03
PTPRB-204ENST00000538708 FCRL6Q6DN72 434 aa8.6□□□□□ -1.03
PTPRB-204ENST00000538708 WDR74Q6RFH5 385 aaPredicted RBP8.6□□□□□ -1.03
PTPRB-204ENST00000538708 GDPGP1Q6ZNW5 385 aa8.6□□□□□ -1.03
PTPRB-204ENST00000538708 H2BFWTQ7Z2G1 175 aa8.6□□□□□ -1.03
PTPRB-204ENST00000538708 RBM45Q8IUH3 476 aaKnown RBP8.6□□□□□ -1.03
PTPRB-204ENST00000538708 GHSRQ92847 366 aa8.6□□□□□ -1.03
PTPRB-204ENST00000538708 MALSU1Q96EH3 234 aa8.6□□□□□ -1.03
PTPRB-204ENST00000538708 LOXL4Q96JB6 756 aa8.6□□□□□ -1.03
PTPRB-204ENST00000538708 BCO1Q9HAY6 547 aa8.6□□□□□ -1.03
PTPRB-204ENST00000538708 OSGIN2Q9Y236 505 aa8.6□□□□□ -1.03
PTPRB-204ENST00000538708 A3GALT2U3KPV4 340 aa8.6□□□□□ -1.03
PTPRB-204ENST00000538708 MYH15Q9Y2K3 1946 aa8.6□□□□□ -1.03
PTPRB-204ENST00000538708 A0A0A6YYD5 115 aa8.6□□□□□ -1.03
PTPRB-204ENST00000538708 TRBV5-4A0A0C4DH59 114 aa8.6□□□□□ -1.03
PTPRB-204ENST00000538708 UPK1AO00322 258 aa8.6□□□□□ -1.03
PTPRB-204ENST00000538708 CPEP16870 476 aa8.6□□□□□ -1.03
PTPRB-204ENST00000538708 ABCD3P28288 659 aa8.6□□□□□ -1.03
PTPRB-204ENST00000538708 C21orf33P30042 268 aaPredicted RBP8.6□□□□□ -1.03
PTPRB-204ENST00000538708 RPS25P62851 125 aaKnown RBP8.6□□□□□ -1.03
PTPRB-204ENST00000538708 RSPO4Q2I0M5 234 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms