RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 ALKBH1Q13686 389 aaKnown RBP6.05□□□□□ -1.44
USP28-207ENST00000538475 ELOCQ15369 112 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 DHCR24Q15392 516 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 SGCAQ16586 387 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 ARHGAP11BQ3KRB8 267 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 TP53I3Q53FA7 332 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 FAM46CQ5VWP2 391 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 OR4C11Q6IEV9 310 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 OR52W1Q6IF63 320 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 ZCCHC12Q6PEW1 402 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 SLC22A25Q6T423 547 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 TMEM150AQ86TG1 271 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 LRRC18Q8N456 261 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 ARRDC1Q8N5I2 433 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 ZNF433Q8N7K0 673 aaPredicted RBP6.05□□□□□ -1.44
USP28-207ENST00000538475 OR8G5Q8NG78 346 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 OR10H5Q8NGA6 315 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 AKR7LQ8NHP1 331 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 TERB2Q8NHR7 220 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 FIBINQ8TAL6 211 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 M1APQ8TC57 530 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 ASB17Q8WXJ9 295 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 SLAMF9Q96A28 289 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 BPIFA2Q96DR5 249 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 LRIG1Q96JA1 1093 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 HHIPL1Q96JK4 782 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 CLCC1Q96S66 551 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 MYADMQ96S97 322 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 TBX5Q99593 518 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 PBDC1Q9BVG4 233 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 COMMD4Q9H0A8 199 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 OR52A5Q9H2C5 316 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 OR51V1Q9H2C8 321 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 R3HDMLQ9H3Y0 253 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 RGCCQ9H4X1 137 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 CERS4Q9HA82 394 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 STARD7Q9NQZ5 370 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 UBQLN4Q9NRR5 601 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 CLDND1Q9NY35 253 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 MEMO1Q9Y316 297 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 STRAPQ9Y3F4 350 aaKnown RBP6.05□□□□□ -1.44
USP28-207ENST00000538475 TMEM14AQ9Y6G1 99 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 TMEM131Q92545 1883 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 FANCMQ8IYD8 2048 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 FAM221BA6H8Z2 402 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 ZNF736B4DX44 427 aaPredicted RBP6.04□□□□□ -1.44
USP28-207ENST00000538475 C1QTNF3-AMACRE9PGA6 284 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 H7C1Q1 480 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 SEPT4O43236 478 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 COCHO43405 550 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 TSPAN6O43657 245 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 CRTAPO75718 401 aaPredicted RBP6.04□□□□□ -1.44
USP28-207ENST00000538475 GLCEO94923 617 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 NDUFB2O95178 105 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 ZNF205O95201 554 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 LYPD3O95274 346 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 FARS2O95363 451 aaKnown RBP6.04□□□□□ -1.44
USP28-207ENST00000538475 HLA-AP01891 365 aaKnown RBP6.04□□□□□ -1.44
USP28-207ENST00000538475 CD3DP04234 171 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 C1QTNF9P0C862 333 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 NQO2P16083 231 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 NFYBP25208 207 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 AVPR2P30518 371 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 NCBP2P52298 156 aaKnown RBP eCLIP6.04□□□□□ -1.44
USP28-207ENST00000538475 ZNF136P52737 540 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 SLC16A1P53985 500 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 ATP1B3P54709 279 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 FXYD6P3P58550 94 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 RAP1AP62834 184 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 DLK1P80370 383 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 LASP1Q14847 261 aaKnown RBP6.04□□□□□ -1.44
USP28-207ENST00000538475 SLC9A5Q14940 896 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 FAM189A2Q15884 450 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 RAB11BQ15907 218 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 ACTBL2Q562R1 376 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 PYY3Q5JQD4 70 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 SDHAF4Q5VUM1 108 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 TPGS2Q68CL5 300 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 FAM166AQ6J272 317 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 MTFR2Q6P444 385 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 OPN5Q6U736 354 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 HEPN1Q6WQI6 88 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 DPY19L2P2Q6ZN68 376 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 C16orf59Q7L2K0 433 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 SLC16A9Q7RTY1 509 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 PEG10Q86TG7 708 aaKnown RBP6.04□□□□□ -1.44
USP28-207ENST00000538475 RAB42Q8N4Z0 105 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 NUP43Q8NFH3 380 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 RNASEH2CQ8TDP1 164 aaKnown RBP6.04□□□□□ -1.44
USP28-207ENST00000538475 ADAMTS15Q8TE58 950 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 TMEM255BQ8WV15 326 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 GLYATL1Q969I3 302 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 R3HDM4Q96D70 268 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 SEH1LQ96EE3 360 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 GALNT14Q96FL9 552 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 WDR77Q9BQA1 342 aaPredicted RBP6.04□□□□□ -1.44
USP28-207ENST00000538475 NAA11Q9BSU3 229 aaPredicted RBP6.04□□□□□ -1.44
USP28-207ENST00000538475 NMNAT2Q9BZQ4 307 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 TRIM2Q9C040 744 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 TGIF2Q9GZN2 237 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms