RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 ANKRD20A5PA0PJZ0 165 aa12.52□□□□□ -0.4
LIMK1-208ENST00000538333 SMLR1H3BR10 107 aa12.52□□□□□ -0.4
LIMK1-208ENST00000538333 SLC17A2O00624 439 aa12.52□□□□□ -0.4
LIMK1-208ENST00000538333 XRCC3O43542 346 aa12.52□□□□□ -0.4
LIMK1-208ENST00000538333 KHDRBS3O75525 346 aaKnown RBP12.52□□□□□ -0.4
LIMK1-208ENST00000538333 HRGP04196 525 aa12.52□□□□□ -0.4
LIMK1-208ENST00000538333 FSTP19883 344 aa12.52□□□□□ -0.4
LIMK1-208ENST00000538333 SDHBP21912 280 aa12.52□□□□□ -0.4
LIMK1-208ENST00000538333 FOXK1P85037 733 aa12.52□□□□□ -0.4
LIMK1-208ENST00000538333 ZFP36L1Q07352 338 aaKnown RBP12.52□□□□□ -0.4
LIMK1-208ENST00000538333 TMEM225Q6GV28 225 aa12.52□□□□□ -0.4
LIMK1-208ENST00000538333 C3orf33Q6P1S2 294 aa12.52□□□□□ -0.4
LIMK1-208ENST00000538333 FAM198BQ6UWH4 519 aa12.52□□□□□ -0.4
LIMK1-208ENST00000538333 FADS6Q8N9I5 356 aa12.52□□□□□ -0.4
LIMK1-208ENST00000538333 WDSUB1Q8N9V3 476 aa12.52□□□□□ -0.4
LIMK1-208ENST00000538333 OR11G2Q8NGC1 345 aa12.52□□□□□ -0.4
LIMK1-208ENST00000538333 OR51D1Q8NGF3 324 aa12.52□□□□□ -0.4
LIMK1-208ENST00000538333 OR56B4Q8NH76 319 aa12.52□□□□□ -0.4
LIMK1-208ENST00000538333 MRPL13Q9BYD1 178 aaKnown RBP12.52□□□□□ -0.4
LIMK1-208ENST00000538333 OR51J1Q9H342 316 aa12.52□□□□□ -0.4
LIMK1-208ENST00000538333 DHDHQ9UQ10 334 aa12.52□□□□□ -0.4
LIMK1-208ENST00000538333 ACOT7O00154 380 aa12.52□□□□□ -0.41
LIMK1-208ENST00000538333 UMODP07911 640 aa12.52□□□□□ -0.41
LIMK1-208ENST00000538333 CD37P11049 281 aa12.52□□□□□ -0.41
LIMK1-208ENST00000538333 IGFBP3P17936 291 aaPredicted RBP12.52□□□□□ -0.41
LIMK1-208ENST00000538333 STOMP27105 288 aa12.52□□□□□ -0.41
LIMK1-208ENST00000538333 EFNB2P52799 333 aa12.52□□□□□ -0.41
LIMK1-208ENST00000538333 BIDP55957 195 aa12.52□□□□□ -0.41
LIMK1-208ENST00000538333 AP3S2P59780 193 aa12.52□□□□□ -0.41
LIMK1-208ENST00000538333 BTBD16Q32M84 506 aa12.52□□□□□ -0.41
LIMK1-208ENST00000538333 ELFN2Q5R3F8 820 aa12.52□□□□□ -0.41
LIMK1-208ENST00000538333 CD276Q5ZPR3 534 aa12.52□□□□□ -0.41
LIMK1-208ENST00000538333 OLFML2AQ68BL7 652 aa12.52□□□□□ -0.41
LIMK1-208ENST00000538333 ANKRD16Q6P6B7 361 aa12.52□□□□□ -0.41
LIMK1-208ENST00000538333 BIVMQ86UB2 503 aa12.52□□□□□ -0.41
LIMK1-208ENST00000538333 LINC00346Q8IVM7 164 aa12.52□□□□□ -0.41
LIMK1-208ENST00000538333 ADPRHL1Q8NDY3 354 aa12.52□□□□□ -0.41
LIMK1-208ENST00000538333 C15orf40Q8WUR7 153 aa12.52□□□□□ -0.41
LIMK1-208ENST00000538333 CMKLR1Q99788 373 aa12.52□□□□□ -0.41
LIMK1-208ENST00000538333 EMC6Q9BV81 110 aa12.52□□□□□ -0.41
LIMK1-208ENST00000538333 ACTR6Q9GZN1 396 aa12.52□□□□□ -0.41
LIMK1-208ENST00000538333 C20orf85Q9H1P6 137 aa12.52□□□□□ -0.41
LIMK1-208ENST00000538333 SLA2Q9H6Q3 261 aa12.52□□□□□ -0.41
LIMK1-208ENST00000538333 EMC9Q9Y3B6 208 aa12.52□□□□□ -0.41
LIMK1-208ENST00000538333 WDR87Q6ZQQ6 2873 aa12.52□□□□□ -0.41
LIMK1-208ENST00000538333 IGHV1-45A0A0A0MS14 117 aa12.51□□□□□ -0.41
LIMK1-208ENST00000538333 NAP1L6A6NFF2 107 aa12.51□□□□□ -0.41
LIMK1-208ENST00000538333 FAM47E-STBD1D6RA91 191 aa12.51□□□□□ -0.41
LIMK1-208ENST00000538333 LAMTOR5O43504 91 aa12.51□□□□□ -0.41
LIMK1-208ENST00000538333 ISG15P05161 165 aa12.51□□□□□ -0.41
LIMK1-208ENST00000538333 CELA2AP08217 269 aa12.51□□□□□ -0.41
LIMK1-208ENST00000538333 POU3F4P49335 361 aa12.51□□□□□ -0.41
LIMK1-208ENST00000538333 TRA2AQ13595 282 aaKnown RBP eCLIP12.51□□□□□ -0.41
LIMK1-208ENST00000538333 DEGS2Q6QHC5 323 aa12.51□□□□□ -0.41
LIMK1-208ENST00000538333 PLCZ1Q86YW0 608 aa12.51□□□□□ -0.41
LIMK1-208ENST00000538333 RNF133Q8WVZ7 376 aa12.51□□□□□ -0.41
LIMK1-208ENST00000538333 GIMAP1Q8WWP7 306 aa12.51□□□□□ -0.41
LIMK1-208ENST00000538333 PISDQ9UG56 409 aa12.51□□□□□ -0.41
LIMK1-208ENST00000538333 A0A1W2PQ72 361 aa12.5□□□□□ -0.41
LIMK1-208ENST00000538333 CTAG2O75638 210 aa12.5□□□□□ -0.41
LIMK1-208ENST00000538333 KLF7O75840 302 aaPredicted RBP12.5□□□□□ -0.41
LIMK1-208ENST00000538333 CCL4P13236 92 aa12.5□□□□□ -0.41
LIMK1-208ENST00000538333 ST3GAL2Q16842 350 aa12.5□□□□□ -0.41
LIMK1-208ENST00000538333 SFRP4Q6FHJ7 346 aaPredicted RBP12.5□□□□□ -0.41
LIMK1-208ENST00000538333 LAMTOR1Q6IAA8 161 aa12.5□□□□□ -0.41
LIMK1-208ENST00000538333 CDH24Q86UP0 819 aa12.5□□□□□ -0.41
LIMK1-208ENST00000538333 AGBL5Q8NDL9 886 aa12.5□□□□□ -0.41
LIMK1-208ENST00000538333 OR5M1Q8NGP8 315 aa12.5□□□□□ -0.41
LIMK1-208ENST00000538333 SLC25A28Q96A46 364 aa12.5□□□□□ -0.41
LIMK1-208ENST00000538333 MS4A3Q96HJ5 214 aa12.5□□□□□ -0.41
LIMK1-208ENST00000538333 ZC3H10Q96K80 434 aaKnown RBP12.5□□□□□ -0.41
LIMK1-208ENST00000538333 IMMP1LQ96LU5 166 aa12.5□□□□□ -0.41
LIMK1-208ENST00000538333 TMEM185BQ9H7F4 350 aa12.5□□□□□ -0.41
LIMK1-208ENST00000538333 OR52A1Q9UKL2 312 aa12.5□□□□□ -0.41
LIMK1-208ENST00000538333 CIB4A0PJX0 185 aa12.5□□□□□ -0.41
LIMK1-208ENST00000538333 GGT3PA6NGU5 568 aa12.5□□□□□ -0.41
LIMK1-208ENST00000538333 FABP7O15540 132 aa12.5□□□□□ -0.41
LIMK1-208ENST00000538333 CD2P06729 351 aa12.5□□□□□ -0.41
LIMK1-208ENST00000538333 PSMB1P20618 241 aaKnown RBP12.5□□□□□ -0.41
LIMK1-208ENST00000538333 CORO6Q6QEF8 472 aa12.5□□□□□ -0.41
LIMK1-208ENST00000538333 PLPP7Q8NBV4 271 aa12.5□□□□□ -0.41
LIMK1-208ENST00000538333 OR1J4Q8NGS1 313 aa12.5□□□□□ -0.41
LIMK1-208ENST00000538333 C11orf40Q8WZ69 217 aa12.5□□□□□ -0.41
LIMK1-208ENST00000538333 FAM3DQ96BQ1 224 aa12.5□□□□□ -0.41
LIMK1-208ENST00000538333 ZNF700Q9H0M5 742 aa12.5□□□□□ -0.41
LIMK1-208ENST00000538333 KCNK15Q9H427 330 aa12.5□□□□□ -0.41
LIMK1-208ENST00000538333 EMC7Q9NPA0 242 aa12.5□□□□□ -0.41
LIMK1-208ENST00000538333 TAS2R4Q9NYW5 299 aa12.5□□□□□ -0.41
LIMK1-208ENST00000538333 HHLA2Q9UM44 414 aa12.5□□□□□ -0.41
LIMK1-208ENST00000538333 FRYLO94915 3013 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 LOC100289279A0A1B0GTE1 492 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 LOC107986453A0A1B0GWG9 222 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 A0A1W2PNR3 127 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 A6NL46 340 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 ZNF814B7Z6K7 855 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 TRAF3IP2O43734 574 aaPredicted RBP12.49□□□□□ -0.41
LIMK1-208ENST00000538333 PEX14O75381 377 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 CER1O95813 267 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 OPN1LWP04000 364 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 KLK3P07288 261 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms