RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 ZNF774Q6NX45 483 aa11.33□□□□□ -0.6
CHFR-216ENST00000538235 SLC27A4Q6P1M0 643 aa11.33□□□□□ -0.6
CHFR-216ENST00000538235 CORO6Q6QEF8 472 aa11.33□□□□□ -0.6
CHFR-216ENST00000538235 PAMR1Q6UXH9 720 aa11.33□□□□□ -0.6
CHFR-216ENST00000538235 CFAP77Q6ZQR2 320 aa11.33□□□□□ -0.6
CHFR-216ENST00000538235 SLC16A14Q7RTX9 510 aa11.33□□□□□ -0.6
CHFR-216ENST00000538235 LINC00346Q8IVM7 164 aa11.33□□□□□ -0.6
CHFR-216ENST00000538235 ZNF511Q8NB15 262 aa11.33□□□□□ -0.6
CHFR-216ENST00000538235 SLC7A6Q92536 515 aa11.33□□□□□ -0.6
CHFR-216ENST00000538235 AKAP1Q92667 903 aaKnown RBP eCLIP11.33□□□□□ -0.6
CHFR-216ENST00000538235 UBE2FQ969M7 185 aa11.33□□□□□ -0.6
CHFR-216ENST00000538235 USB1Q9BQ65 265 aaKnown RBP11.33□□□□□ -0.6
CHFR-216ENST00000538235 OR2H1Q9GZK4 316 aa11.33□□□□□ -0.6
CHFR-216ENST00000538235 NDEL1Q9GZM8 345 aa11.33□□□□□ -0.6
CHFR-216ENST00000538235 WDR76Q9H967 626 aa11.33□□□□□ -0.6
CHFR-216ENST00000538235 UBTD1Q9HAC8 227 aa11.33□□□□□ -0.6
CHFR-216ENST00000538235 SLC24A3Q9HC58 644 aa11.33□□□□□ -0.6
CHFR-216ENST00000538235 PNRC2Q9NPJ4 139 aaKnown RBP11.33□□□□□ -0.6
CHFR-216ENST00000538235 PLEKHA6Q9Y2H5 1048 aa11.33□□□□□ -0.6
CHFR-216ENST00000538235 COMMD3-BMI1R4GMX3 469 aa11.33□□□□□ -0.6
CHFR-216ENST00000538235 CCDC168Q8NDH2 2452 aa11.32□□□□□ -0.6
CHFR-216ENST00000538235 GPRIN2O60269 458 aa11.32□□□□□ -0.6
CHFR-216ENST00000538235 UBL3O95164 117 aa11.32□□□□□ -0.6
CHFR-216ENST00000538235 ATE1O95260 518 aa11.32□□□□□ -0.6
CHFR-216ENST00000538235 BAG2O95816 211 aa11.32□□□□□ -0.6
CHFR-216ENST00000538235 RENP00797 406 aa11.32□□□□□ -0.6
CHFR-216ENST00000538235 CD3EP07766 207 aa11.32□□□□□ -0.6
CHFR-216ENST00000538235 SOD3P08294 240 aa11.32□□□□□ -0.6
CHFR-216ENST00000538235 CST2P09228 141 aa11.32□□□□□ -0.6
CHFR-216ENST00000538235 DANCRP0C864 163 aa11.32□□□□□ -0.6
CHFR-216ENST00000538235 ZNF35P13682 527 aa11.32□□□□□ -0.6
CHFR-216ENST00000538235 CD53P19397 219 aa11.32□□□□□ -0.6
CHFR-216ENST00000538235 APEX1P27695 318 aaKnown RBP11.32□□□□□ -0.6
CHFR-216ENST00000538235 HOXC12P31275 282 aa11.32□□□□□ -0.6
CHFR-216ENST00000538235 WNT5AP41221 380 aa11.32□□□□□ -0.6
CHFR-216ENST00000538235 SLC25A1P53007 311 aa11.32□□□□□ -0.6
CHFR-216ENST00000538235 CDH11P55287 796 aa11.32□□□□□ -0.6
CHFR-216ENST00000538235 ERVS71-1P61550 626 aa11.32□□□□□ -0.6
CHFR-216ENST00000538235 HIST1H3AP68431 136 aa11.32□□□□□ -0.6
CHFR-216ENST00000538235 NKX6-1P78426 367 aaPredicted RBP11.32□□□□□ -0.6
CHFR-216ENST00000538235 SNCBQ16143 134 aa11.32□□□□□ -0.6
CHFR-216ENST00000538235 ZIK1Q3SY52 487 aaPredicted RBP11.32□□□□□ -0.6
CHFR-216ENST00000538235 ZNF672Q499Z4 452 aaPredicted RBP11.32□□□□□ -0.6
CHFR-216ENST00000538235 CCDC92Q53HC0 331 aaPredicted RBP11.32□□□□□ -0.6
CHFR-216ENST00000538235 HIST2H3PS2Q5TEC6 136 aa11.32□□□□□ -0.6
CHFR-216ENST00000538235 PLBD1Q6P4A8 553 aa11.32□□□□□ -0.6
CHFR-216ENST00000538235 HIST2H3AQ71DI3 136 aa11.32□□□□□ -0.6
CHFR-216ENST00000538235 GLB1L2Q8IW92 636 aa11.32□□□□□ -0.6
CHFR-216ENST00000538235 FAM169BQ8N8A8 192 aa11.32□□□□□ -0.6
CHFR-216ENST00000538235 SMAP2Q8WU79 429 aaPredicted RBP11.32□□□□□ -0.6
CHFR-216ENST00000538235 NRG4Q8WWG1 115 aa11.32□□□□□ -0.6
CHFR-216ENST00000538235 AMELYQ99218 206 aa11.32□□□□□ -0.6
CHFR-216ENST00000538235 RIBC2Q9H4K1 309 aa11.32□□□□□ -0.6
CHFR-216ENST00000538235 ESRP2Q9H6T0 727 aaKnown RBP11.32□□□□□ -0.6
CHFR-216ENST00000538235 ASH2LQ9UBL3 628 aa11.32□□□□□ -0.6
CHFR-216ENST00000538235 AASSQ9UDR5 926 aa11.32□□□□□ -0.6
CHFR-216ENST00000538235 BAIAP2Q9UQB8 552 aa11.32□□□□□ -0.6
CHFR-216ENST00000538235 KLHDC2Q9Y2U9 406 aa11.32□□□□□ -0.6
CHFR-216ENST00000538235 C5orf63A6NC05 138 aa11.31□□□□□ -0.6
CHFR-216ENST00000538235 PRR32B1ATL7 298 aa11.31□□□□□ -0.6
CHFR-216ENST00000538235 HS3ST1O14792 307 aa11.31□□□□□ -0.6
CHFR-216ENST00000538235 RER1O15258 196 aa11.31□□□□□ -0.6
CHFR-216ENST00000538235 GOSR1O95249 250 aa11.31□□□□□ -0.6
CHFR-216ENST00000538235 SNAP29O95721 258 aa11.31□□□□□ -0.6
CHFR-216ENST00000538235 CD8AP01732 235 aa11.31□□□□□ -0.6
CHFR-216ENST00000538235 NPR2P20594 1047 aa11.31□□□□□ -0.6
CHFR-216ENST00000538235 PTAFRP25105 342 aa11.31□□□□□ -0.6
CHFR-216ENST00000538235 ARR3P36575 388 aa11.31□□□□□ -0.6
CHFR-216ENST00000538235 ALDH3A2P51648 485 aa11.31□□□□□ -0.6
CHFR-216ENST00000538235 NR1H2P55055 460 aa11.31□□□□□ -0.6
CHFR-216ENST00000538235 RSPO1Q2MKA7 263 aaPredicted RBP11.31□□□□□ -0.6
CHFR-216ENST00000538235 C3orf36Q3SXR2 165 aa11.31□□□□□ -0.6
CHFR-216ENST00000538235 SLC18B1Q6NT16 456 aa11.31□□□□□ -0.6
CHFR-216ENST00000538235 TMEM108Q6UXF1 575 aa11.31□□□□□ -0.6
CHFR-216ENST00000538235 VASH1Q7L8A9 365 aaPredicted RBP11.31□□□□□ -0.6
CHFR-216ENST00000538235 KRTAP1-3Q8IUG1 177 aa11.31□□□□□ -0.6
CHFR-216ENST00000538235 CPOQ8IVL8 374 aa11.31□□□□□ -0.6
CHFR-216ENST00000538235 ZNF101Q8IZC7 436 aa11.31□□□□□ -0.6
CHFR-216ENST00000538235 RFLNBQ8N5W9 214 aa11.31□□□□□ -0.6
CHFR-216ENST00000538235 FNDC8Q8TC99 324 aa11.31□□□□□ -0.6
CHFR-216ENST00000538235 DNAJC9Q8WXX5 260 aa11.31□□□□□ -0.6
CHFR-216ENST00000538235 MAP6Q96JE9 813 aa11.31□□□□□ -0.6
CHFR-216ENST00000538235 POM121L2Q96KW2 1035 aa11.31□□□□□ -0.6
CHFR-216ENST00000538235 POFUT1Q9H488 388 aa11.31□□□□□ -0.6
CHFR-216ENST00000538235 TOR3AQ9H497 397 aa11.31□□□□□ -0.6
CHFR-216ENST00000538235 ZNF556Q9HAH1 456 aa11.31□□□□□ -0.6
CHFR-216ENST00000538235 TVP23BQ9NYZ1 205 aa11.31□□□□□ -0.6
CHFR-216ENST00000538235 KLHL21Q9UJP4 597 aa11.31□□□□□ -0.6
CHFR-216ENST00000538235 RIIAD1A6NNX1 92 aa11.3□□□□□ -0.6
CHFR-216ENST00000538235 SYNGR3O43761 229 aa11.3□□□□□ -0.6
CHFR-216ENST00000538235 SELENOFO60613 162 aa11.3□□□□□ -0.6
CHFR-216ENST00000538235 SERPINA5P05154 406 aa11.3□□□□□ -0.6
CHFR-216ENST00000538235 DBHP09172 617 aa11.3□□□□□ -0.6
CHFR-216ENST00000538235 NR2C1P13056 603 aa11.3□□□□□ -0.6
CHFR-216ENST00000538235 CENPAP49450 140 aa11.3□□□□□ -0.6
CHFR-216ENST00000538235 ARHGDIAP52565 204 aa11.3□□□□□ -0.6
CHFR-216ENST00000538235 ESRRGP62508 458 aa11.3□□□□□ -0.6
CHFR-216ENST00000538235 TEKQ02763 1124 aa11.3□□□□□ -0.6
CHFR-216ENST00000538235 HSF2Q03933 536 aa11.3□□□□□ -0.6
CHFR-216ENST00000538235 LRRC36Q1X8D7 754 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms