RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 PSKH1P11801 424 aa21.19■□□□□ 0.98
HMGA2-208ENST00000537429 NAA10P41227 235 aaPredicted RBP21.19■□□□□ 0.98
HMGA2-208ENST00000537429 RPS27P42677 84 aaKnown RBP21.19■□□□□ 0.98
HMGA2-208ENST00000537429 SLC15A1P46059 708 aa21.19■□□□□ 0.98
HMGA2-208ENST00000537429 SORDQ00796 357 aa21.19■□□□□ 0.98
HMGA2-208ENST00000537429 POU4F2Q12837 409 aa21.19■□□□□ 0.98
HMGA2-208ENST00000537429 SLC16A9Q7RTY1 509 aa21.19■□□□□ 0.98
HMGA2-208ENST00000537429 SYT9Q86SS6 491 aa21.19■□□□□ 0.98
HMGA2-208ENST00000537429 OR6N2Q8NGY6 317 aa21.19■□□□□ 0.98
HMGA2-208ENST00000537429 CNN2Q99439 309 aaKnown RBP21.19■□□□□ 0.98
HMGA2-208ENST00000537429 WACQ9BTA9 647 aa21.19■□□□□ 0.98
HMGA2-208ENST00000537429 CDADC1Q9BWV3 514 aa21.19■□□□□ 0.98
HMGA2-208ENST00000537429 B3GNT2Q9NY97 397 aa21.19■□□□□ 0.98
HMGA2-208ENST00000537429 LHFPL6Q9Y693 200 aa21.19■□□□□ 0.98
HMGA2-208ENST00000537429 CACNA1CQ13936 2221 aa21.18■□□□□ 0.98
HMGA2-208ENST00000537429 C12orf71A8MTZ7 269 aa21.18■□□□□ 0.98
HMGA2-208ENST00000537429 XPNPEP2O43895 674 aa21.18■□□□□ 0.98
HMGA2-208ENST00000537429 MMP7P09237 267 aaPredicted RBP21.18■□□□□ 0.98
HMGA2-208ENST00000537429 PATE4P0C8F1 98 aa21.18■□□□□ 0.98
HMGA2-208ENST00000537429 CAPZA2P47755 286 aa21.18■□□□□ 0.98
HMGA2-208ENST00000537429 UBE2NP61088 152 aaKnown RBP21.18■□□□□ 0.98
HMGA2-208ENST00000537429 CSNK2BP67870 215 aa21.18■□□□□ 0.98
HMGA2-208ENST00000537429 AQP6Q13520 282 aa21.18■□□□□ 0.98
HMGA2-208ENST00000537429 BPIFB6Q8NFQ5 453 aa21.18■□□□□ 0.98
HMGA2-208ENST00000537429 KCNN2Q9H2S1 579 aa21.18■□□□□ 0.98
HMGA2-208ENST00000537429 OBP2BQ9NPH6 170 aa21.18■□□□□ 0.98
HMGA2-208ENST00000537429 NPDC1Q9NQX5 325 aaPredicted RBP21.18■□□□□ 0.98
HMGA2-208ENST00000537429 ASH2LQ9UBL3 628 aa21.18■□□□□ 0.98
HMGA2-208ENST00000537429 EXOGQ9Y2C4 368 aaKnown RBP21.18■□□□□ 0.98
HMGA2-208ENST00000537429 APOL3O95236 402 aa21.17■□□□□ 0.98
HMGA2-208ENST00000537429 HLA-HP01893 362 aa21.17■□□□□ 0.98
HMGA2-208ENST00000537429 SLC36A2Q495M3 483 aa21.17■□□□□ 0.98
HMGA2-208ENST00000537429 C1QTNF12Q5T7M4 302 aa21.17■□□□□ 0.98
HMGA2-208ENST00000537429 C22orf34Q6ZV56 151 aa21.17■□□□□ 0.98
HMGA2-208ENST00000537429 DPY19L4Q7Z388 723 aa21.17■□□□□ 0.98
HMGA2-208ENST00000537429 DPPA2Q7Z7J5 298 aa21.17■□□□□ 0.98
HMGA2-208ENST00000537429 OR4F15Q8NGB8 312 aa21.17■□□□□ 0.98
HMGA2-208ENST00000537429 OR52N5Q8NH56 324 aa21.17■□□□□ 0.98
HMGA2-208ENST00000537429 LGALS12Q96DT0 336 aa21.17■□□□□ 0.98
HMGA2-208ENST00000537429 POLR1DQ9Y2S0 133 aa21.17■□□□□ 0.98
HMGA2-208ENST00000537429 AMDHD2Q9Y303 409 aa21.17■□□□□ 0.98
HMGA2-208ENST00000537429 SLC25A15Q9Y619 301 aa21.17■□□□□ 0.98
HMGA2-208ENST00000537429 USP9XQ93008 2570 aaPredicted RBP21.16■□□□□ 0.98
HMGA2-208ENST00000537429 A0A1W2PR80 420 aa21.16■□□□□ 0.98
HMGA2-208ENST00000537429 SLC1A7O00341 560 aa21.16■□□□□ 0.98
HMGA2-208ENST00000537429 TMCC2O75069 709 aa21.16■□□□□ 0.98
HMGA2-208ENST00000537429 UBL3O95164 117 aa21.16■□□□□ 0.98
HMGA2-208ENST00000537429 SPARCP09486 303 aa21.16■□□□□ 0.98
HMGA2-208ENST00000537429 CCDC159P0C7I6 412 aa21.16■□□□□ 0.98
HMGA2-208ENST00000537429 ZNF32P17041 273 aa21.16■□□□□ 0.98
HMGA2-208ENST00000537429 ATP6V1E1P36543 226 aa21.16■□□□□ 0.98
HMGA2-208ENST00000537429 TUBA1BP68363 451 aa21.16■□□□□ 0.98
HMGA2-208ENST00000537429 TUBA4AP68366 448 aa21.16■□□□□ 0.98
HMGA2-208ENST00000537429 RAB40BQ12829 278 aa21.16■□□□□ 0.98
HMGA2-208ENST00000537429 TAB1Q15750 504 aa21.16■□□□□ 0.98
HMGA2-208ENST00000537429 ALKBH2Q6NS38 261 aa21.16■□□□□ 0.98
HMGA2-208ENST00000537429 SLC18B1Q6NT16 456 aa21.16■□□□□ 0.98
HMGA2-208ENST00000537429 CORO6Q6QEF8 472 aa21.16■□□□□ 0.98
HMGA2-208ENST00000537429 TUBA1AQ71U36 451 aa21.16■□□□□ 0.98
HMGA2-208ENST00000537429 SHFQ7M4L6 423 aa21.16■□□□□ 0.98
HMGA2-208ENST00000537429 LINC00346Q8IVM7 164 aa21.16■□□□□ 0.98
HMGA2-208ENST00000537429 OTOSQ8NHW6 89 aa21.16■□□□□ 0.98
HMGA2-208ENST00000537429 SMAP2Q8WU79 429 aaPredicted RBP21.16■□□□□ 0.98
HMGA2-208ENST00000537429 NANOS1Q8WY41 292 aaKnown RBP21.16■□□□□ 0.98
HMGA2-208ENST00000537429 RHNO1Q9BSD3 238 aa21.16■□□□□ 0.98
HMGA2-208ENST00000537429 YIPF3Q9GZM5 350 aa21.16■□□□□ 0.98
HMGA2-208ENST00000537429 PSORS1C1Q9UIG5 152 aa21.16■□□□□ 0.98
HMGA2-208ENST00000537429 J3QRE1 110 aa21.15■□□□□ 0.98
HMGA2-208ENST00000537429 FAM20BO75063 409 aa21.15■□□□□ 0.98
HMGA2-208ENST00000537429 CD79AP11912 226 aa21.15■□□□□ 0.98
HMGA2-208ENST00000537429 PPP3CBP16298 524 aa21.15■□□□□ 0.98
HMGA2-208ENST00000537429 HCCSP53701 268 aa21.15■□□□□ 0.98
HMGA2-208ENST00000537429 PCBD1P61457 104 aa21.15■□□□□ 0.98
HMGA2-208ENST00000537429 RAB1AP62820 205 aa21.15■□□□□ 0.98
HMGA2-208ENST00000537429 HIST1H3AP68431 136 aa21.15■□□□□ 0.98
HMGA2-208ENST00000537429 PIGFQ07326 219 aa21.15■□□□□ 0.98
HMGA2-208ENST00000537429 SNTB1Q13884 538 aaKnown RBP21.15■□□□□ 0.98
HMGA2-208ENST00000537429 KLHL22Q53GT1 634 aa21.15■□□□□ 0.98
HMGA2-208ENST00000537429 HIST2H3PS2Q5TEC6 136 aa21.15■□□□□ 0.98
HMGA2-208ENST00000537429 HIST2H3AQ71DI3 136 aa21.15■□□□□ 0.98
HMGA2-208ENST00000537429 CDC20BQ86Y33 519 aa21.15■□□□□ 0.98
HMGA2-208ENST00000537429 ZNF786Q8N393 782 aa21.15■□□□□ 0.98
HMGA2-208ENST00000537429 HSD17B8Q92506 261 aa21.15■□□□□ 0.98
HMGA2-208ENST00000537429 GGHQ92820 318 aa21.15■□□□□ 0.98
HMGA2-208ENST00000537429 NOX3Q9HBY0 568 aa21.15■□□□□ 0.98
HMGA2-208ENST00000537429 CCNB1IP1Q9NPC3 277 aa21.15■□□□□ 0.98
HMGA2-208ENST00000537429 LRCH1Q9Y2L9 728 aa21.15■□□□□ 0.98
HMGA2-208ENST00000537429 GSG1Q2KHT4 349 aa21.14■□□□□ 0.98
HMGA2-208ENST00000537429 RBM48Q5RL73 367 aaKnown RBP21.14■□□□□ 0.98
HMGA2-208ENST00000537429 SLC35F2Q8IXU6 374 aa21.14■□□□□ 0.98
HMGA2-208ENST00000537429 GJC3Q8NFK1 279 aa21.14■□□□□ 0.98
HMGA2-208ENST00000537429 OR2AJ1Q8NGZ0 328 aa21.14■□□□□ 0.98
HMGA2-208ENST00000537429 MUCL1Q96DR8 90 aa21.14■□□□□ 0.98
HMGA2-208ENST00000537429 RNF121Q9H920 327 aa21.14■□□□□ 0.98
HMGA2-208ENST00000537429 CNOT2Q9NZN8 540 aaKnown RBP21.14■□□□□ 0.98
HMGA2-208ENST00000537429 GDF2Q9UK05 429 aaPredicted RBP21.14■□□□□ 0.98
HMGA2-208ENST00000537429 TIMM10BQ9Y5J6 103 aa21.14■□□□□ 0.98
HMGA2-208ENST00000537429 RER1O15258 196 aa21.14■□□□□ 0.97
HMGA2-208ENST00000537429 WNT11O96014 354 aa21.14■□□□□ 0.97
HMGA2-208ENST00000537429 PIPP12273 146 aaPredicted RBP21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms