RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 TMEM38BQ9NVV0 291 aa6.07□□□□□ -1.44
YBX3-206ENST00000536823 STX18Q9P2W9 335 aaKnown RBP6.07□□□□□ -1.44
YBX3-206ENST00000536823 FBXL3Q9UKT7 428 aa6.07□□□□□ -1.44
YBX3-206ENST00000536823 FKBP7Q9Y680 259 aa6.07□□□□□ -1.44
YBX3-206ENST00000536823 YLPM1P49750 1951 aaKnown RBP6.06□□□□□ -1.44
YBX3-206ENST00000536823 INAFM1C9JVW0 142 aa6.06□□□□□ -1.44
YBX3-206ENST00000536823 J3KTA2 159 aa6.06□□□□□ -1.44
YBX3-206ENST00000536823 hCG_2039718K7EN88 272 aa6.06□□□□□ -1.44
YBX3-206ENST00000536823 FFAR1O14842 300 aa6.06□□□□□ -1.44
YBX3-206ENST00000536823 TRMUO75648 421 aaKnown RBP6.06□□□□□ -1.44
YBX3-206ENST00000536823 PRSS23O95084 383 aa6.06□□□□□ -1.44
YBX3-206ENST00000536823 UBL3O95164 117 aa6.06□□□□□ -1.44
YBX3-206ENST00000536823 FARS2O95363 451 aaKnown RBP6.06□□□□□ -1.44
YBX3-206ENST00000536823 RAB36O95755 333 aa6.06□□□□□ -1.44
YBX3-206ENST00000536823 SERPINA1P01009 418 aa6.06□□□□□ -1.44
YBX3-206ENST00000536823 IGHMP01871 453 aa6.06□□□□□ -1.44
YBX3-206ENST00000536823 QDPRP09417 244 aa6.06□□□□□ -1.44
YBX3-206ENST00000536823 OR4A8P0C604 315 aa6.06□□□□□ -1.44
YBX3-206ENST00000536823 OR8G3PP0DMU2 310 aa6.06□□□□□ -1.44
YBX3-206ENST00000536823 IFI30P13284 250 aa6.06□□□□□ -1.44
YBX3-206ENST00000536823 SLC25A16P16260 332 aa6.06□□□□□ -1.44
YBX3-206ENST00000536823 NPR2P20594 1047 aa6.06□□□□□ -1.44
YBX3-206ENST00000536823 APEX1P27695 318 aaKnown RBP6.06□□□□□ -1.44
YBX3-206ENST00000536823 THBS4P35443 961 aa6.06□□□□□ -1.44
YBX3-206ENST00000536823 YAP1P46937 504 aaKnown RBP6.06□□□□□ -1.44
YBX3-206ENST00000536823 PTDSS1P48651 473 aaKnown RBP6.06□□□□□ -1.44
YBX3-206ENST00000536823 PPOXP50336 477 aa6.06□□□□□ -1.44
YBX3-206ENST00000536823 ZNF133P52736 654 aaPredicted RBP6.06□□□□□ -1.44
YBX3-206ENST00000536823 CLRN1P58418 232 aa6.06□□□□□ -1.44
YBX3-206ENST00000536823 IL13RA1P78552 427 aa6.06□□□□□ -1.44
YBX3-206ENST00000536823 DAG1Q14118 895 aa6.06□□□□□ -1.44
YBX3-206ENST00000536823 TRAM2Q15035 370 aa6.06□□□□□ -1.44
YBX3-206ENST00000536823 TAF11Q15544 211 aa6.06□□□□□ -1.44
YBX3-206ENST00000536823 HIST3H3Q16695 136 aa6.06□□□□□ -1.44
YBX3-206ENST00000536823 PRR31Q5SQ13 230 aa6.06□□□□□ -1.44
YBX3-206ENST00000536823 C10orf128Q5T292 105 aa6.06□□□□□ -1.44
YBX3-206ENST00000536823 ARMC4Q5T2S8 1044 aa6.06□□□□□ -1.44
YBX3-206ENST00000536823 CPLX4Q7Z7G2 160 aa6.06□□□□□ -1.44
YBX3-206ENST00000536823 DPPA2Q7Z7J5 298 aa6.06□□□□□ -1.44
YBX3-206ENST00000536823 LYSMD2Q8IV50 215 aa6.06□□□□□ -1.44
YBX3-206ENST00000536823 SLC22A24Q8N4F4 322 aa6.06□□□□□ -1.44
YBX3-206ENST00000536823 ZNF525Q8N782 197 aa6.06□□□□□ -1.44
YBX3-206ENST00000536823 OR4K5Q8NGD3 323 aa6.06□□□□□ -1.44
YBX3-206ENST00000536823 ACOT11Q8WXI4 607 aaPredicted RBP6.06□□□□□ -1.44
YBX3-206ENST00000536823 FAM162AQ96A26 154 aa6.06□□□□□ -1.44
YBX3-206ENST00000536823 NMD3Q96D46 503 aaKnown RBP6.06□□□□□ -1.44
YBX3-206ENST00000536823 BPIFA2Q96DR5 249 aa6.06□□□□□ -1.44
YBX3-206ENST00000536823 WWC2-AS2Q96NR7 200 aa6.06□□□□□ -1.44
YBX3-206ENST00000536823 ZNF347Q96SE7 839 aa6.06□□□□□ -1.44
YBX3-206ENST00000536823 ALG12Q9BV10 488 aa6.06□□□□□ -1.44
YBX3-206ENST00000536823 FNDC11Q9BVV2 318 aa6.06□□□□□ -1.44
YBX3-206ENST00000536823 MRPL13Q9BYD1 178 aaKnown RBP6.06□□□□□ -1.44
YBX3-206ENST00000536823 TXNIPQ9H3M7 391 aa6.06□□□□□ -1.44
YBX3-206ENST00000536823 ANKRD19PQ9H560 264 aa6.06□□□□□ -1.44
YBX3-206ENST00000536823 SPAG4Q9NPE6 437 aa6.06□□□□□ -1.44
YBX3-206ENST00000536823 FBXO9Q9UK97 447 aaPredicted RBP6.06□□□□□ -1.44
YBX3-206ENST00000536823 SNX13Q9Y5W8 968 aa6.06□□□□□ -1.44
YBX3-206ENST00000536823 ENPP4Q9Y6X5 453 aa6.06□□□□□ -1.44
YBX3-206ENST00000536823 DNHD1Q96M86 4753 aa6.05□□□□□ -1.44
YBX3-206ENST00000536823 A0A087WUU8 490 aa6.05□□□□□ -1.44
YBX3-206ENST00000536823 TMEM129A0AVI4 362 aa6.05□□□□□ -1.44
YBX3-206ENST00000536823 GMNCA6NCL1 334 aa6.05□□□□□ -1.44
YBX3-206ENST00000536823 VSTM5A8MXK1 200 aa6.05□□□□□ -1.44
YBX3-206ENST00000536823 GPRIN2O60269 458 aa6.05□□□□□ -1.44
YBX3-206ENST00000536823 LY6HO94772 140 aa6.05□□□□□ -1.44
YBX3-206ENST00000536823 SERPINA5P05154 406 aa6.05□□□□□ -1.44
YBX3-206ENST00000536823 PATE4P0C8F1 98 aa6.05□□□□□ -1.44
YBX3-206ENST00000536823 SAGP10523 405 aaPredicted RBP6.05□□□□□ -1.44
YBX3-206ENST00000536823 NR2C1P13056 603 aa6.05□□□□□ -1.44
YBX3-206ENST00000536823 ZNF35P13682 527 aa6.05□□□□□ -1.44
YBX3-206ENST00000536823 ACADSP16219 412 aa6.05□□□□□ -1.44
YBX3-206ENST00000536823 NCK1P16333 377 aa6.05□□□□□ -1.44
YBX3-206ENST00000536823 MAKP20794 623 aa6.05□□□□□ -1.44
YBX3-206ENST00000536823 NR4A1P22736 598 aa6.05□□□□□ -1.44
YBX3-206ENST00000536823 PCSK6P29122 969 aa6.05□□□□□ -1.44
YBX3-206ENST00000536823 SLC9A3P48764 834 aa6.05□□□□□ -1.44
YBX3-206ENST00000536823 MTNR1BP49286 362 aa6.05□□□□□ -1.44
YBX3-206ENST00000536823 PDLIM4P50479 330 aa6.05□□□□□ -1.44
YBX3-206ENST00000536823 ZNF84P51523 738 aa6.05□□□□□ -1.44
YBX3-206ENST00000536823 RPL27P61353 136 aaKnown RBP6.05□□□□□ -1.44
YBX3-206ENST00000536823 RPS23P62266 143 aaKnown RBP6.05□□□□□ -1.44
YBX3-206ENST00000536823 RAB1AP62820 205 aa6.05□□□□□ -1.44
YBX3-206ENST00000536823 GNGT1P63211 74 aa6.05□□□□□ -1.44
YBX3-206ENST00000536823 MRPS34P82930 218 aaKnown RBP6.05□□□□□ -1.44
YBX3-206ENST00000536823 PPP2R2BQ00005 443 aa6.05□□□□□ -1.44
YBX3-206ENST00000536823 MYBPC1Q00872 1141 aa6.05□□□□□ -1.44
YBX3-206ENST00000536823 PIGFQ07326 219 aa6.05□□□□□ -1.44
YBX3-206ENST00000536823 LOXL1Q08397 574 aaPredicted RBP6.05□□□□□ -1.44
YBX3-206ENST00000536823 CD47Q08722 323 aa6.05□□□□□ -1.44
YBX3-206ENST00000536823 TOP3AQ13472 1001 aaPredicted RBP6.05□□□□□ -1.44
YBX3-206ENST00000536823 FHL1Q13642 323 aa6.05□□□□□ -1.44
YBX3-206ENST00000536823 RAB39AQ14964 217 aa6.05□□□□□ -1.44
YBX3-206ENST00000536823 ANKDD1AQ495B1 522 aa6.05□□□□□ -1.44
YBX3-206ENST00000536823 NRN1LQ496H8 165 aa6.05□□□□□ -1.44
YBX3-206ENST00000536823 ALG10Q5BKT4 473 aa6.05□□□□□ -1.44
YBX3-206ENST00000536823 FAM205BPQ63HN1 556 aa6.05□□□□□ -1.44
YBX3-206ENST00000536823 KRT80Q6KB66 452 aa6.05□□□□□ -1.44
YBX3-206ENST00000536823 TMEM53Q6P2H8 277 aa6.05□□□□□ -1.44
YBX3-206ENST00000536823 ZNF730Q6ZMV8 503 aa6.05□□□□□ -1.44
YBX3-206ENST00000536823 TSEN54Q7Z6J9 526 aaKnown RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms