RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	TEX37	Q96LM6	180 aa		14.33	□□□□□ -0.12
NCAPD3-213	ENST00000534532	TEAD3	Q99594	435 aa		14.33	□□□□□ -0.12
NCAPD3-213	ENST00000534532	NECAP2	Q9NVZ3	263 aa		14.33	□□□□□ -0.12
NCAPD3-213	ENST00000534532	PPIL1	Q9Y3C6	166 aa		14.33	□□□□□ -0.12
NCAPD3-213	ENST00000534532	OR2A25	A4D2G3	310 aa		14.33	□□□□□ -0.12
NCAPD3-213	ENST00000534532	LGALS8	O00214	317 aa		14.33	□□□□□ -0.12
NCAPD3-213	ENST00000534532	FOLR1	P15328	257 aa		14.33	□□□□□ -0.12
NCAPD3-213	ENST00000534532	PTGS2	P35354	604 aa		14.33	□□□□□ -0.12
NCAPD3-213	ENST00000534532	FOXF1	Q12946	379 aa		14.33	□□□□□ -0.12
NCAPD3-213	ENST00000534532	SHB	Q15464	509 aa		14.33	□□□□□ -0.12
NCAPD3-213	ENST00000534532	ACER2	Q5QJU3	275 aa		14.33	□□□□□ -0.12
NCAPD3-213	ENST00000534532	USP51	Q70EK9	711 aa		14.33	□□□□□ -0.12
NCAPD3-213	ENST00000534532	SLC35G3	Q8N808	338 aa		14.33	□□□□□ -0.12
NCAPD3-213	ENST00000534532	ARL11	Q969Q4	196 aa		14.33	□□□□□ -0.12
NCAPD3-213	ENST00000534532	OR2B2	Q9GZK3	357 aa		14.33	□□□□□ -0.12
NCAPD3-213	ENST00000534532	TXNIP	Q9H3M7	391 aa		14.33	□□□□□ -0.12
NCAPD3-213	ENST00000534532	COL18A1	P39060	1754 aa		14.33	□□□□□ -0.12
NCAPD3-213	ENST00000534532	CCDC163	A0A0D9SF12	145 aa		14.32	□□□□□ -0.12
NCAPD3-213	ENST00000534532	LOC100289279	A0A1B0GTE1	492 aa		14.32	□□□□□ -0.12
NCAPD3-213	ENST00000534532	HS3ST1	O14792	307 aa		14.32	□□□□□ -0.12
NCAPD3-213	ENST00000534532	PAPLN	O95428	1278 aa		14.32	□□□□□ -0.12
NCAPD3-213	ENST00000534532	SCG5	P05408	212 aa		14.32	□□□□□ -0.12
NCAPD3-213	ENST00000534532	TPT1	P13693	172 aa	Known RBP	14.32	□□□□□ -0.12
NCAPD3-213	ENST00000534532	SNRPD2	P62316	118 aa	Known RBP	14.32	□□□□□ -0.12
NCAPD3-213	ENST00000534532	JAM3	Q9BX67	310 aa		14.32	□□□□□ -0.12
NCAPD3-213	ENST00000534532	PLEKHF2	Q9H8W4	249 aa		14.32	□□□□□ -0.12
NCAPD3-213	ENST00000534532	SHC1	P29353	583 aa		14.32	□□□□□ -0.12
NCAPD3-213	ENST00000534532	ECI1	P42126	302 aa		14.32	□□□□□ -0.12
NCAPD3-213	ENST00000534532	HBG1	P69891	147 aa		14.32	□□□□□ -0.12
NCAPD3-213	ENST00000534532	HBG2	P69892	147 aa		14.32	□□□□□ -0.12
NCAPD3-213	ENST00000534532	ZNF468	Q5VIY5	522 aa	Predicted RBP	14.32	□□□□□ -0.12
NCAPD3-213	ENST00000534532	HEPHL1	Q6MZM0	1159 aa		14.32	□□□□□ -0.12
NCAPD3-213	ENST00000534532	ADGRF3	Q8IZF5	1079 aa		14.32	□□□□□ -0.12
NCAPD3-213	ENST00000534532	MZB1	Q8WU39	189 aa		14.32	□□□□□ -0.12
NCAPD3-213	ENST00000534532	C3orf49	Q96BT1	292 aa		14.32	□□□□□ -0.12
NCAPD3-213	ENST00000534532	FAM210A	Q96ND0	272 aa		14.32	□□□□□ -0.12
NCAPD3-213	ENST00000534532	IGHV3-15	A0A0B4J1V0	119 aa		14.32	□□□□□ -0.12
NCAPD3-213	ENST00000534532	TMEM82	A0PJX8	343 aa		14.32	□□□□□ -0.12
NCAPD3-213	ENST00000534532	CTXN2	P0C2S0	81 aa		14.32	□□□□□ -0.12
NCAPD3-213	ENST00000534532	ARRB2	P32121	409 aa		14.32	□□□□□ -0.12
NCAPD3-213	ENST00000534532	POLR2I	P36954	125 aa	Known RBP	14.32	□□□□□ -0.12
NCAPD3-213	ENST00000534532	MEOX1	P50221	254 aa		14.32	□□□□□ -0.12
NCAPD3-213	ENST00000534532	RBMS2	Q15434	407 aa	Known RBP	14.32	□□□□□ -0.12
NCAPD3-213	ENST00000534532	SFXN4	Q6P4A7	337 aa		14.32	□□□□□ -0.12
NCAPD3-213	ENST00000534532	TMEM81	Q6P7N7	255 aa		14.32	□□□□□ -0.12
NCAPD3-213	ENST00000534532	TRIL	Q7L0X0	811 aa		14.32	□□□□□ -0.12
NCAPD3-213	ENST00000534532	OR52I1	Q8NGK6	324 aa		14.32	□□□□□ -0.12
NCAPD3-213	ENST00000534532	OR10X1	Q8NGY0	326 aa		14.32	□□□□□ -0.12
NCAPD3-213	ENST00000534532	OR51F2	Q8NH61	342 aa		14.32	□□□□□ -0.12
NCAPD3-213	ENST00000534532	ATF6B	Q99941	703 aa		14.32	□□□□□ -0.12
NCAPD3-213	ENST00000534532	HEYL	Q9NQ87	328 aa	Predicted RBP	14.32	□□□□□ -0.12
NCAPD3-213	ENST00000534532	LRP5	O75197	1615 aa		14.32	□□□□□ -0.12
NCAPD3-213	ENST00000534532	IDO2	Q6ZQW0	420 aa		14.32	□□□□□ -0.12
NCAPD3-213	ENST00000534532	OVCH1	Q7RTY7	1134 aa		14.32	□□□□□ -0.12
NCAPD3-213	ENST00000534532	GALNT16	Q8N428	558 aa		14.32	□□□□□ -0.12
NCAPD3-213	ENST00000534532	SSX3	Q99909	188 aa		14.32	□□□□□ -0.12
NCAPD3-213	ENST00000534532	VN1R1	Q9GZP7	353 aa		14.32	□□□□□ -0.12
NCAPD3-213	ENST00000534532	S1PR5	Q9H228	398 aa		14.32	□□□□□ -0.12
NCAPD3-213	ENST00000534532	RIMS4	Q9H426	269 aa	Predicted RBP	14.32	□□□□□ -0.12
NCAPD3-213	ENST00000534532	PRKN	O60260	465 aa	Predicted RBP	14.31	□□□□□ -0.12
NCAPD3-213	ENST00000534532	CLDN1	O95832	211 aa		14.31	□□□□□ -0.12
NCAPD3-213	ENST00000534532	OPRL1	P41146	370 aa		14.31	□□□□□ -0.12
NCAPD3-213	ENST00000534532	SUB1	P53999	127 aa	Known RBP eCLIP	14.31	□□□□□ -0.12	1e-10	■■■■■ 27.1
NCAPD3-213	ENST00000534532	SNRPG	P62308	76 aa	Known RBP	14.31	□□□□□ -0.12
NCAPD3-213	ENST00000534532	INSM1	Q01101	510 aa	Predicted RBP	14.31	□□□□□ -0.12
NCAPD3-213	ENST00000534532	OR52N5	Q8NH56	324 aa		14.31	□□□□□ -0.12
NCAPD3-213	ENST00000534532	OR10J5	Q8NHC4	309 aa		14.31	□□□□□ -0.12
NCAPD3-213	ENST00000534532	APOBEC4	Q8WW27	367 aa	Known RBP	14.31	□□□□□ -0.12
NCAPD3-213	ENST00000534532	OPALIN	Q96PE5	141 aa		14.31	□□□□□ -0.12
NCAPD3-213	ENST00000534532	ACER3	Q9NUN7	267 aa		14.31	□□□□□ -0.12
NCAPD3-213	ENST00000534532	MED29	Q9NX70	200 aa		14.31	□□□□□ -0.12
NCAPD3-213	ENST00000534532	IGHV5-51	A0A0C4DH38	117 aa		14.31	□□□□□ -0.12
NCAPD3-213	ENST00000534532	MRPL19	P49406	292 aa	Known RBP	14.31	□□□□□ -0.12
NCAPD3-213	ENST00000534532	ACSM1	Q08AH1	577 aa		14.31	□□□□□ -0.12
NCAPD3-213	ENST00000534532	CLPP	Q16740	277 aa	Predicted RBP	14.31	□□□□□ -0.12
NCAPD3-213	ENST00000534532	WIPI1	Q5MNZ9	446 aa	Predicted RBP	14.31	□□□□□ -0.12
NCAPD3-213	ENST00000534532	DLEU7	Q6UYE1	221 aa		14.31	□□□□□ -0.12
NCAPD3-213	ENST00000534532	MAVS	Q7Z434	540 aa		14.31	□□□□□ -0.12
NCAPD3-213	ENST00000534532	SLCO4A1	Q96BD0	722 aa		14.31	□□□□□ -0.12
NCAPD3-213	ENST00000534532	FBXO17	Q96EF6	278 aa		14.31	□□□□□ -0.12
NCAPD3-213	ENST00000534532	MALSU1	Q96EH3	234 aa		14.31	□□□□□ -0.12
NCAPD3-213	ENST00000534532	SMIM3	Q9BZL3	60 aa		14.31	□□□□□ -0.12
NCAPD3-213	ENST00000534532	DDX60L	Q5H9U9	1706 aa	Known RBP	14.31	□□□□□ -0.12
NCAPD3-213	ENST00000534532	NCR1	O76036	304 aa		14.31	□□□□□ -0.12
NCAPD3-213	ENST00000534532	BCKDHB	P21953	392 aa		14.31	□□□□□ -0.12
NCAPD3-213	ENST00000534532	RAC1	P63000	192 aa		14.31	□□□□□ -0.12
NCAPD3-213	ENST00000534532	PLPP7	Q8NBV4	271 aa		14.31	□□□□□ -0.12
NCAPD3-213	ENST00000534532	OR51E1	Q8TCB6	317 aa		14.31	□□□□□ -0.12
NCAPD3-213	ENST00000534532	ZNF71	Q9NQZ8	489 aa	Predicted RBP	14.31	□□□□□ -0.12
NCAPD3-213	ENST00000534532		A0A1W2PS29	197 aa		14.31	□□□□□ -0.12
NCAPD3-213	ENST00000534532	SBK2	P0C263	348 aa		14.31	□□□□□ -0.12
NCAPD3-213	ENST00000534532	TNFRSF1A	P19438	455 aa		14.31	□□□□□ -0.12
NCAPD3-213	ENST00000534532	B4GALNT1	Q00973	533 aa		14.31	□□□□□ -0.12
NCAPD3-213	ENST00000534532	RNPS1	Q15287	305 aa	Known RBP	14.31	□□□□□ -0.12
NCAPD3-213	ENST00000534532	LIPN	Q5VXI9	398 aa		14.31	□□□□□ -0.12
NCAPD3-213	ENST00000534532	SMIM15	Q7Z3B0	74 aa		14.31	□□□□□ -0.12
NCAPD3-213	ENST00000534532	GPR87	Q9BY21	358 aa		14.31	□□□□□ -0.12
NCAPD3-213	ENST00000534532	ERVMER34-1	Q9H9K5	563 aa		14.31	□□□□□ -0.12
NCAPD3-213	ENST00000534532	CMC2	Q9NRP2	79 aa		14.31	□□□□□ -0.12
NCAPD3-213	ENST00000534532	LOC107986453	A0A1B0GWG9	222 aa		14.31	□□□□□ -0.12

Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms