RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 UGT2B4P06133 528 aa4.28□□□□□ -1.72
CASP4-213ENST00000534356 RHOCP08134 193 aa4.28□□□□□ -1.72
CASP4-213ENST00000534356 KRT13P13646 458 aa4.28□□□□□ -1.72
CASP4-213ENST00000534356 PGCP20142 388 aa4.28□□□□□ -1.72
CASP4-213ENST00000534356 CALB2P22676 271 aa4.28□□□□□ -1.72
CASP4-213ENST00000534356 CD1CP29017 333 aa4.28□□□□□ -1.72
CASP4-213ENST00000534356 HNRNPH3P31942 346 aaKnown RBP4.28□□□□□ -1.72
CASP4-213ENST00000534356 NUDT1P36639 197 aa4.28□□□□□ -1.72
CASP4-213ENST00000534356 CCNHP51946 323 aaPredicted RBP4.28□□□□□ -1.72
CASP4-213ENST00000534356 PLA2G16P53816 162 aa4.28□□□□□ -1.72
CASP4-213ENST00000534356 POLR2FP61218 127 aaKnown RBP4.28□□□□□ -1.72
CASP4-213ENST00000534356 KLHL40Q2TBA0 621 aa4.28□□□□□ -1.72
CASP4-213ENST00000534356 NADK2Q4G0N4 442 aa4.28□□□□□ -1.72
CASP4-213ENST00000534356 CARD16Q5EG05 197 aa4.28□□□□□ -1.72
CASP4-213ENST00000534356 C16orf62Q7Z3J2 963 aa4.28□□□□□ -1.72
CASP4-213ENST00000534356 TMEM252Q8N6L7 170 aa4.28□□□□□ -1.72
CASP4-213ENST00000534356 OR9A1PQ8NGU1 263 aa4.28□□□□□ -1.72
CASP4-213ENST00000534356 PNPT1Q8TCS8 783 aaKnown RBP4.28□□□□□ -1.72
CASP4-213ENST00000534356 C7orf33Q8WU49 177 aa4.28□□□□□ -1.72
CASP4-213ENST00000534356 C19orf60Q96EN9 201 aa4.28□□□□□ -1.72
CASP4-213ENST00000534356 BTN2A3PQ96KV6 586 aa4.28□□□□□ -1.72
CASP4-213ENST00000534356 C12orf66Q96MD2 445 aa4.28□□□□□ -1.72
CASP4-213ENST00000534356 SERPINB11Q96P15 392 aa4.28□□□□□ -1.72
CASP4-213ENST00000534356 NANSQ9NR45 359 aa4.28□□□□□ -1.72
CASP4-213ENST00000534356 DDIT4Q9NX09 232 aa4.28□□□□□ -1.72
CASP4-213ENST00000534356 LCMT1Q9UIC8 334 aa4.28□□□□□ -1.72
CASP4-213ENST00000534356 COQ4Q9Y3A0 265 aa4.28□□□□□ -1.72
CASP4-213ENST00000534356 CNTRLQ7Z7A1 2325 aa4.28□□□□□ -1.72
CASP4-213ENST00000534356 PIKFYVEQ9Y2I7 2098 aa4.28□□□□□ -1.72
CASP4-213ENST00000534356 ZNF106Q9H2Y7 1883 aaKnown RBP4.27□□□□□ -1.73
CASP4-213ENST00000534356 TCP11X1B4DZS4 312 aa4.27□□□□□ -1.73
CASP4-213ENST00000534356 RAD1O60671 282 aa4.27□□□□□ -1.73
CASP4-213ENST00000534356 TM7SF2O76062 418 aa4.27□□□□□ -1.73
CASP4-213ENST00000534356 PCCBP05166 539 aa4.27□□□□□ -1.73
CASP4-213ENST00000534356 FGF1P05230 155 aa4.27□□□□□ -1.73
CASP4-213ENST00000534356 PNMA6AP0CW24 399 aaPredicted RBP4.27□□□□□ -1.73
CASP4-213ENST00000534356 SFTPCP11686 197 aa4.27□□□□□ -1.73
CASP4-213ENST00000534356 CTSEP14091 401 aa4.27□□□□□ -1.73
CASP4-213ENST00000534356 MGMTP16455 207 aa4.27□□□□□ -1.73
CASP4-213ENST00000534356 NT5EP21589 574 aa4.27□□□□□ -1.73
CASP4-213ENST00000534356 GABRR1P24046 479 aa4.27□□□□□ -1.73
CASP4-213ENST00000534356 AK4P27144 223 aaPredicted RBP4.27□□□□□ -1.73
CASP4-213ENST00000534356 NDUFA8P51970 172 aa4.27□□□□□ -1.73
CASP4-213ENST00000534356 SLC10A7Q0GE19 358 aa4.27□□□□□ -1.73
CASP4-213ENST00000534356 PJVKQ0ZLH3 352 aa4.27□□□□□ -1.73
CASP4-213ENST00000534356 HSP90AA5PQ58FG0 334 aa4.27□□□□□ -1.73
CASP4-213ENST00000534356 SPECC1LQ69YQ0 1117 aa4.27□□□□□ -1.73
CASP4-213ENST00000534356 RFLNAQ6ZTI6 216 aa4.27□□□□□ -1.73
CASP4-213ENST00000534356 FAM183BPQ6ZVS7 135 aa4.27□□□□□ -1.73
CASP4-213ENST00000534356 FAM220AQ7Z4H9 259 aa4.27□□□□□ -1.73
CASP4-213ENST00000534356 ATP6V0D2Q8N8Y2 350 aa4.27□□□□□ -1.73
CASP4-213ENST00000534356 CCDC71LQ8N9Z2 235 aa4.27□□□□□ -1.73
CASP4-213ENST00000534356 OR2AP1Q8NGE2 309 aa4.27□□□□□ -1.73
CASP4-213ENST00000534356 OR5L2Q8NGL0 311 aa4.27□□□□□ -1.73
CASP4-213ENST00000534356 ZNF606Q8WXB4 792 aa4.27□□□□□ -1.73
CASP4-213ENST00000534356 OSTF1Q92882 214 aa4.27□□□□□ -1.73
CASP4-213ENST00000534356 NAT6Q93015 286 aa4.27□□□□□ -1.73
CASP4-213ENST00000534356 HSFY1Q96LI6 401 aa4.27□□□□□ -1.73
CASP4-213ENST00000534356 NAP1L5Q96NT1 182 aaPredicted RBP4.27□□□□□ -1.73
CASP4-213ENST00000534356 DYRK4Q9NR20 520 aa4.27□□□□□ -1.73
CASP4-213ENST00000534356 SLC39A1Q9NY26 324 aa4.27□□□□□ -1.73
CASP4-213ENST00000534356 GNG12Q9UBI6 72 aa4.27□□□□□ -1.73
CASP4-213ENST00000534356 CHRNA9Q9UGM1 479 aa4.27□□□□□ -1.73
CASP4-213ENST00000534356 PCYT1BQ9Y5K3 369 aaPredicted RBP4.27□□□□□ -1.73
CASP4-213ENST00000534356 ALG6Q9Y672 507 aa4.27□□□□□ -1.73
CASP4-213ENST00000534356 SEC16AO15027 2179 aa4.27□□□□□ -1.73
CASP4-213ENST00000534356 DNHD1Q96M86 4753 aa4.27□□□□□ -1.73
CASP4-213ENST00000534356 NF1P21359 2839 aa4.26□□□□□ -1.73
CASP4-213ENST00000534356 IGHV2-70DA0A0C4DH43 119 aa4.26□□□□□ -1.73
CASP4-213ENST00000534356 A0A0J9YXY3 114 aa4.26□□□□□ -1.73
CASP4-213ENST00000534356 KIF2AO00139 706 aaPredicted RBP4.26□□□□□ -1.73
CASP4-213ENST00000534356 ZSCAN12O43309 604 aa4.26□□□□□ -1.73
CASP4-213ENST00000534356 MFN2O95140 757 aa4.26□□□□□ -1.73
CASP4-213ENST00000534356 HPNP05981 417 aa4.26□□□□□ -1.73
CASP4-213ENST00000534356 PAEPP09466 180 aa4.26□□□□□ -1.73
CASP4-213ENST00000534356 OR1E1P30953 314 aa4.26□□□□□ -1.73
CASP4-213ENST00000534356 HPCAL1P37235 193 aa4.26□□□□□ -1.73
CASP4-213ENST00000534356 CDH4P55283 916 aa4.26□□□□□ -1.73
CASP4-213ENST00000534356 HSD17B7P56937 341 aa4.26□□□□□ -1.73
CASP4-213ENST00000534356 CDC20Q12834 499 aa4.26□□□□□ -1.73
CASP4-213ENST00000534356 CYTH1Q15438 398 aa4.26□□□□□ -1.73
CASP4-213ENST00000534356 WDR74Q6RFH5 385 aaPredicted RBP4.26□□□□□ -1.73
CASP4-213ENST00000534356 KIR3DL3Q8N743 410 aa4.26□□□□□ -1.73
CASP4-213ENST00000534356 RNF138Q8WVD3 245 aa4.26□□□□□ -1.73
CASP4-213ENST00000534356 DCUN1D4Q92564 292 aa4.26□□□□□ -1.73
CASP4-213ENST00000534356 C16orf45Q96MC5 204 aaPredicted RBP4.26□□□□□ -1.73
CASP4-213ENST00000534356 POPDC2Q9HBU9 364 aa4.26□□□□□ -1.73
CASP4-213ENST00000534356 WARS2Q9UGM6 360 aaKnown RBP4.26□□□□□ -1.73
CASP4-213ENST00000534356 DCDC2Q9UHG0 476 aa4.26□□□□□ -1.73
CASP4-213ENST00000534356 KIAA1257Q9ULG3 409 aa4.26□□□□□ -1.73
CASP4-213ENST00000534356 TMCC3Q9ULS5 477 aa4.26□□□□□ -1.73
CASP4-213ENST00000534356 IFT52Q9Y366 437 aa4.26□□□□□ -1.73
CASP4-213ENST00000534356 POLEQ07864 2286 aa4.26□□□□□ -1.73
CASP4-213ENST00000534356 PPIAL4DF5H284 164 aa4.25□□□□□ -1.73
CASP4-213ENST00000534356 HCN1O60741 890 aa4.25□□□□□ -1.73
CASP4-213ENST00000534356 CLDN11O75508 207 aa4.25□□□□□ -1.73
CASP4-213ENST00000534356 YEATS4O95619 227 aa4.25□□□□□ -1.73
CASP4-213ENST00000534356 GNA14O95837 355 aa4.25□□□□□ -1.73
CASP4-213ENST00000534356 TNFP01375 233 aa4.25□□□□□ -1.73
CASP4-213ENST00000534356 RNH1P13489 461 aaKnown RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms