RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 TRAV40A0A0B4J280 105 aa12.54□□□□□ -0.4
CTSB-230ENST00000534149 EVPLLA8MZ36 301 aa12.54□□□□□ -0.4
CTSB-230ENST00000534149 H3BSA7 217 aa12.54□□□□□ -0.4
CTSB-230ENST00000534149 M0QX08 132 aa12.54□□□□□ -0.4
CTSB-230ENST00000534149 AQP2P41181 271 aa12.54□□□□□ -0.4
CTSB-230ENST00000534149 MRPL19P49406 292 aaKnown RBP12.54□□□□□ -0.4
CTSB-230ENST00000534149 CD47Q08722 323 aa12.54□□□□□ -0.4
CTSB-230ENST00000534149 PSG7Q13046 419 aa12.54□□□□□ -0.4
CTSB-230ENST00000534149 CDK5R2Q13319 367 aa12.54□□□□□ -0.4
CTSB-230ENST00000534149 WDR93Q6P2C0 686 aa12.54□□□□□ -0.4
CTSB-230ENST00000534149 HDDC2Q7Z4H3 204 aa12.54□□□□□ -0.4
CTSB-230ENST00000534149 PTOV1Q86YD1 416 aa12.54□□□□□ -0.4
CTSB-230ENST00000534149 C1orf174Q8IYL3 243 aa12.54□□□□□ -0.4
CTSB-230ENST00000534149 KIR3DL3Q8N743 410 aa12.54□□□□□ -0.4
CTSB-230ENST00000534149 OR2Z1Q8NG97 314 aa12.54□□□□□ -0.4
CTSB-230ENST00000534149 PFN4Q8NHR9 129 aa12.54□□□□□ -0.4
CTSB-230ENST00000534149 ITLN1Q8WWA0 313 aa12.54□□□□□ -0.4
CTSB-230ENST00000534149 HDAC2Q92769 488 aaKnown RBP12.54□□□□□ -0.4
CTSB-230ENST00000534149 NMD3Q96D46 503 aaKnown RBP12.54□□□□□ -0.4
CTSB-230ENST00000534149 MPP4Q96JB8 637 aa12.54□□□□□ -0.4
CTSB-230ENST00000534149 SAMD8Q96LT4 415 aa12.54□□□□□ -0.4
CTSB-230ENST00000534149 CPPED1Q9BRF8 314 aaPredicted RBP12.54□□□□□ -0.4
CTSB-230ENST00000534149 POFUT1Q9H488 388 aa12.54□□□□□ -0.4
CTSB-230ENST00000534149 CEACAM18A8MTB9 384 aa12.53□□□□□ -0.4
CTSB-230ENST00000534149 HOXA3O43365 443 aaPredicted RBP12.53□□□□□ -0.4
CTSB-230ENST00000534149 ICMTO60725 284 aa12.53□□□□□ -0.4
CTSB-230ENST00000534149 TGDSO95455 350 aa12.53□□□□□ -0.4
CTSB-230ENST00000534149 PLATP00750 562 aa12.53□□□□□ -0.4
CTSB-230ENST00000534149 TNFRSF1AP19438 455 aa12.53□□□□□ -0.4
CTSB-230ENST00000534149 TNFSF4P23510 183 aa12.53□□□□□ -0.4
CTSB-230ENST00000534149 MDH2P40926 338 aaKnown RBP12.53□□□□□ -0.4
CTSB-230ENST00000534149 ARHGDIAP52565 204 aa12.53□□□□□ -0.4
CTSB-230ENST00000534149 ARMC4Q5T2S8 1044 aa12.53□□□□□ -0.4
CTSB-230ENST00000534149 ZNF774Q6NX45 483 aa12.53□□□□□ -0.4
CTSB-230ENST00000534149 EPGNQ6UW88 154 aa12.53□□□□□ -0.4
CTSB-230ENST00000534149 Q6ZR03 302 aa12.53□□□□□ -0.4
CTSB-230ENST00000534149 C17orf107Q6ZR85 190 aa12.53□□□□□ -0.4
CTSB-230ENST00000534149 C11orf65Q8NCR3 313 aa12.53□□□□□ -0.4
CTSB-230ENST00000534149 MOSPD2Q8NHP6 518 aa12.53□□□□□ -0.4
CTSB-230ENST00000534149 C4orf45Q96LM5 186 aa12.53□□□□□ -0.4
CTSB-230ENST00000534149 CCT8L2Q96SF2 557 aa12.53□□□□□ -0.4
CTSB-230ENST00000534149 PRSS27Q9BQR3 290 aa12.53□□□□□ -0.4
CTSB-230ENST00000534149 SMURF2Q9HAU4 748 aa12.53□□□□□ -0.4
CTSB-230ENST00000534149 ELOVL3Q9HB03 270 aa12.53□□□□□ -0.4
CTSB-230ENST00000534149 TNFRSF19Q9NS68 423 aa12.53□□□□□ -0.4
CTSB-230ENST00000534149 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.53□□□□□ -0.45e-10■■□□□ 13.3
CTSB-230ENST00000534149 PPP1R3CQ9UQK1 317 aa12.53□□□□□ -0.4
CTSB-230ENST00000534149 LRCH1Q9Y2L9 728 aa12.53□□□□□ -0.4
CTSB-230ENST00000534149 USH1CQ9Y6N9 552 aa12.53□□□□□ -0.4
CTSB-230ENST00000534149 V9GYY5 206 aaPredicted RBP12.53□□□□□ -0.4
CTSB-230ENST00000534149 FAM181BA6NEQ2 426 aa12.52□□□□□ -0.41
CTSB-230ENST00000534149 OR7A10O76100 309 aa12.52□□□□□ -0.41
CTSB-230ENST00000534149 MT-ND1P03886 318 aa12.52□□□□□ -0.41
CTSB-230ENST00000534149 FUT1P19526 365 aa12.52□□□□□ -0.41
CTSB-230ENST00000534149 CD247P20963 164 aa12.52□□□□□ -0.41
CTSB-230ENST00000534149 LAP3P28838 519 aa12.52□□□□□ -0.41
CTSB-230ENST00000534149 PAX2Q02962 417 aa12.52□□□□□ -0.41
CTSB-230ENST00000534149 CYP51A1Q16850 503 aa12.52□□□□□ -0.41
CTSB-230ENST00000534149 FAM27BQ5VT28 67 aa12.52□□□□□ -0.41
CTSB-230ENST00000534149 BRICD5Q6PL45 260 aa12.52□□□□□ -0.41
CTSB-230ENST00000534149 SLC25A47Q6Q0C1 308 aa12.52□□□□□ -0.41
CTSB-230ENST00000534149 BTNL3Q6UXE8 466 aa12.52□□□□□ -0.41
CTSB-230ENST00000534149 ZER1Q7Z7L7 766 aa12.52□□□□□ -0.41
CTSB-230ENST00000534149 ALDH16A1Q8IZ83 802 aa12.52□□□□□ -0.41
CTSB-230ENST00000534149 CLDN22Q8N7P3 220 aa12.52□□□□□ -0.41
CTSB-230ENST00000534149 UPRTQ96BW1 309 aa12.52□□□□□ -0.41
CTSB-230ENST00000534149 PKP2Q99959 881 aa12.52□□□□□ -0.41
CTSB-230ENST00000534149 SSBP3Q9BWW4 388 aaPredicted RBP12.52□□□□□ -0.41
CTSB-230ENST00000534149 NANOGQ9H9S0 305 aa12.52□□□□□ -0.41
CTSB-230ENST00000534149 ARMCX1Q9P291 453 aa12.52□□□□□ -0.41
CTSB-230ENST00000534149 STX18Q9P2W9 335 aaKnown RBP12.52□□□□□ -0.41
CTSB-230ENST00000534149 IL20RAQ9UHF4 553 aa12.52□□□□□ -0.41
CTSB-230ENST00000534149 IGHV2-70DA0A0C4DH43 119 aa12.51□□□□□ -0.41
CTSB-230ENST00000534149 A0A1B0GUS0 222 aa12.51□□□□□ -0.41
CTSB-230ENST00000534149 TMEM178BH3BS89 294 aa12.51□□□□□ -0.41
CTSB-230ENST00000534149 POLR3GO15318 223 aaPredicted RBP12.51□□□□□ -0.41
CTSB-230ENST00000534149 ZNF205O95201 554 aa12.51□□□□□ -0.41
CTSB-230ENST00000534149 ABHD16AO95870 558 aa12.51□□□□□ -0.41
CTSB-230ENST00000534149 CST2P09228 141 aa12.51□□□□□ -0.41
CTSB-230ENST00000534149 WNT2P09544 360 aa12.51□□□□□ -0.41
CTSB-230ENST00000534149 PPIAL4GP0DN37 164 aa12.51□□□□□ -0.41
CTSB-230ENST00000534149 RPS2P15880 293 aaKnown RBP12.51□□□□□ -0.41
CTSB-230ENST00000534149 GSTM3P21266 225 aa12.51□□□□□ -0.41
CTSB-230ENST00000534149 MMP16P51512 607 aa12.51□□□□□ -0.41
CTSB-230ENST00000534149 RAG2P55895 527 aa12.51□□□□□ -0.41
CTSB-230ENST00000534149 TOP3AQ13472 1001 aaPredicted RBP12.51□□□□□ -0.41
CTSB-230ENST00000534149 SELPLGQ14242 412 aa12.51□□□□□ -0.41
CTSB-230ENST00000534149 DEFB112Q30KQ8 113 aa12.51□□□□□ -0.41
CTSB-230ENST00000534149 RUNDC3AQ59EK9 446 aa12.51□□□□□ -0.41
CTSB-230ENST00000534149 LRRN1Q6UXK5 716 aa12.51□□□□□ -0.41
CTSB-230ENST00000534149 DLEU7Q6UYE1 221 aa12.51□□□□□ -0.41
CTSB-230ENST00000534149 BRD3OSQ6XYD6 125 aa12.51□□□□□ -0.41
CTSB-230ENST00000534149 NKAIN4Q8IVV8 208 aa12.51□□□□□ -0.41
CTSB-230ENST00000534149 MUC20Q8N307 709 aaPredicted RBP12.51□□□□□ -0.41
CTSB-230ENST00000534149 POU5F2Q8N7G0 328 aa12.51□□□□□ -0.41
CTSB-230ENST00000534149 OR4F5Q8NH21 305 aa12.51□□□□□ -0.41
CTSB-230ENST00000534149 TMEM255BQ8WV15 326 aa12.51□□□□□ -0.41
CTSB-230ENST00000534149 ZDHHC16Q969W1 377 aa12.51□□□□□ -0.41
CTSB-230ENST00000534149 TAMM41Q96BW9 452 aa12.51□□□□□ -0.41
CTSB-230ENST00000534149 SGTBQ96EQ0 304 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms