RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 CD276Q5ZPR3 534 aa5.27□□□□□ -1.57
CD44-237ENST00000534082 UNQ6126/PRO20091Q6UXV3 157 aa5.27□□□□□ -1.57
CD44-237ENST00000534082 Q6ZR03 302 aa5.27□□□□□ -1.57
CD44-237ENST00000534082 DCDC5Q6ZRR9 648 aa5.27□□□□□ -1.57
CD44-237ENST00000534082 H1FNTQ75WM6 255 aaPredicted RBP5.27□□□□□ -1.57
CD44-237ENST00000534082 DPPA2Q7Z7J5 298 aa5.27□□□□□ -1.57
CD44-237ENST00000534082 ZER1Q7Z7L7 766 aa5.27□□□□□ -1.57
CD44-237ENST00000534082 ZNF440Q8IYI8 595 aa5.27□□□□□ -1.57
CD44-237ENST00000534082 SCAIQ8N9R8 606 aa5.27□□□□□ -1.57
CD44-237ENST00000534082 PNLDC1Q8NA58 520 aaKnown RBP5.27□□□□□ -1.57
CD44-237ENST00000534082 ADPRHL1Q8NDY3 354 aa5.27□□□□□ -1.57
CD44-237ENST00000534082 HIPK4Q8NE63 616 aa5.27□□□□□ -1.57
CD44-237ENST00000534082 OR4K5Q8NGD3 323 aa5.27□□□□□ -1.57
CD44-237ENST00000534082 ZNF420Q8TAQ5 688 aaPredicted RBP5.27□□□□□ -1.57
CD44-237ENST00000534082 ABHD4Q8TB40 342 aa5.27□□□□□ -1.57
CD44-237ENST00000534082 MIPOL1Q8TD10 442 aa5.27□□□□□ -1.57
CD44-237ENST00000534082 XAGE5Q8WWM1 108 aa5.27□□□□□ -1.57
CD44-237ENST00000534082 NSMAFQ92636 917 aa5.27□□□□□ -1.57
CD44-237ENST00000534082 TXNDC15Q96J42 360 aa5.27□□□□□ -1.57
CD44-237ENST00000534082 MAGEB18Q96M61 343 aa5.27□□□□□ -1.57
CD44-237ENST00000534082 RCHY1Q96PM5 261 aa5.27□□□□□ -1.57
CD44-237ENST00000534082 DPY30Q9C005 99 aa5.27□□□□□ -1.57
CD44-237ENST00000534082 DPH5Q9H2P9 285 aa5.27□□□□□ -1.57
CD44-237ENST00000534082 TNFRSF12AQ9NP84 129 aa5.27□□□□□ -1.57
CD44-237ENST00000534082 RLIMQ9NVW2 624 aa5.27□□□□□ -1.57
CD44-237ENST00000534082 EIF3KQ9UBQ5 218 aaKnown RBP5.27□□□□□ -1.57
CD44-237ENST00000534082 SNX12Q9UMY4 172 aa5.27□□□□□ -1.57
CD44-237ENST00000534082 TMED5Q9Y3A6 229 aa5.27□□□□□ -1.57
CD44-237ENST00000534082 A0A087WUJ7 227 aa5.26□□□□□ -1.57
CD44-237ENST00000534082 LSM1O15116 133 aaKnown RBP5.26□□□□□ -1.57
CD44-237ENST00000534082 NPHS1O60500 1241 aa5.26□□□□□ -1.57
CD44-237ENST00000534082 SERPINI2O75830 405 aa5.26□□□□□ -1.57
CD44-237ENST00000534082 JTBO76095 146 aa5.26□□□□□ -1.57
CD44-237ENST00000534082 FSTL3O95633 263 aa5.26□□□□□ -1.57
CD44-237ENST00000534082 MMP7P09237 267 aaPredicted RBP5.26□□□□□ -1.57
CD44-237ENST00000534082 IL7RP16871 459 aa5.26□□□□□ -1.57
CD44-237ENST00000534082 RPS4Y1P22090 263 aaKnown RBP5.26□□□□□ -1.57
CD44-237ENST00000534082 CBLP22681 906 aa5.26□□□□□ -1.57
CD44-237ENST00000534082 AHCYP23526 432 aa5.26□□□□□ -1.57
CD44-237ENST00000534082 STOMP27105 288 aa5.26□□□□□ -1.57
CD44-237ENST00000534082 PSMB10P40306 273 aa5.26□□□□□ -1.57
CD44-237ENST00000534082 ACAA2P42765 397 aaKnown RBP5.26□□□□□ -1.57
CD44-237ENST00000534082 NPY4RP50391 375 aa5.26□□□□□ -1.57
CD44-237ENST00000534082 ARF6P62330 175 aa5.26□□□□□ -1.57
CD44-237ENST00000534082 MRPS25P82663 173 aaKnown RBP5.26□□□□□ -1.57
CD44-237ENST00000534082 PSG7Q13046 419 aa5.26□□□□□ -1.57
CD44-237ENST00000534082 HABP2Q14520 560 aaPredicted RBP5.26□□□□□ -1.57
CD44-237ENST00000534082 PTGR1Q14914 329 aa5.26□□□□□ -1.57
CD44-237ENST00000534082 TAF11Q15544 211 aa5.26□□□□□ -1.57
CD44-237ENST00000534082 LY6EQ16553 131 aa5.26□□□□□ -1.57
CD44-237ENST00000534082 GALNTL6Q49A17 601 aa5.26□□□□□ -1.57
CD44-237ENST00000534082 PABPC1L2AQ5JQF8 200 aa5.26□□□□□ -1.57
CD44-237ENST00000534082 TCTEX1D4Q5JR98 221 aa5.26□□□□□ -1.57
CD44-237ENST00000534082 FAM69AQ5T7M9 428 aa5.26□□□□□ -1.57
CD44-237ENST00000534082 WDR88Q6ZMY6 472 aa5.26□□□□□ -1.57
CD44-237ENST00000534082 VMO1Q7Z5L0 202 aa5.26□□□□□ -1.57
CD44-237ENST00000534082 SLC22A9Q8IVM8 553 aa5.26□□□□□ -1.57
CD44-237ENST00000534082 CLECL1Q8IZS7 167 aa5.26□□□□□ -1.57
CD44-237ENST00000534082 NATD1Q8N6N6 113 aa5.26□□□□□ -1.57
CD44-237ENST00000534082 CCNYL1Q8N7R7 359 aa5.26□□□□□ -1.57
CD44-237ENST00000534082 SPC24Q8NBT2 197 aa5.26□□□□□ -1.57
CD44-237ENST00000534082 WIPF2Q8TF74 440 aaPredicted RBP5.26□□□□□ -1.57
CD44-237ENST00000534082 TMEM54Q969K7 222 aa5.26□□□□□ -1.57
CD44-237ENST00000534082 TAAR8Q969N4 342 aa5.26□□□□□ -1.57
CD44-237ENST00000534082 POM121L2Q96KW2 1035 aa5.26□□□□□ -1.57
CD44-237ENST00000534082 NPFFR1Q9GZQ6 430 aa5.26□□□□□ -1.57
CD44-237ENST00000534082 SLC38A1Q9H2H9 487 aa5.26□□□□□ -1.57
CD44-237ENST00000534082 MMADHCQ9H3L0 296 aaPredicted RBP5.26□□□□□ -1.57
CD44-237ENST00000534082 ZNF702PQ9H963 129 aa5.26□□□□□ -1.57
CD44-237ENST00000534082 RAB18Q9NP72 206 aa5.26□□□□□ -1.57
CD44-237ENST00000534082 INPP5EQ9NRR6 644 aa5.26□□□□□ -1.57
CD44-237ENST00000534082 MAN2C1Q9NTJ4 1040 aa5.26□□□□□ -1.57
CD44-237ENST00000534082 SERTAD4Q9NUC0 356 aa5.26□□□□□ -1.57
CD44-237ENST00000534082 GLTPQ9NZD2 209 aa5.26□□□□□ -1.57
CD44-237ENST00000534082 CTSZQ9UBR2 303 aa5.26□□□□□ -1.57
CD44-237ENST00000534082 TBK1Q9UHD2 729 aa5.26□□□□□ -1.57
CD44-237ENST00000534082 MAB21L2Q9Y586 359 aa5.26□□□□□ -1.57
CD44-237ENST00000534082 LOC100509620A0A075B734 347 aa5.25□□□□□ -1.57
CD44-237ENST00000534082 A0A1B0GVI7 797 aa5.25□□□□□ -1.57
CD44-237ENST00000534082 A0A1W2PRD5 423 aa5.25□□□□□ -1.57
CD44-237ENST00000534082 A0A1W2PRF3 423 aa5.25□□□□□ -1.57
CD44-237ENST00000534082 A0A1W2PRM7 423 aa5.25□□□□□ -1.57
CD44-237ENST00000534082 CDHR4A6H8M9 788 aa5.25□□□□□ -1.57
CD44-237ENST00000534082 LRRC30A6NM36 301 aa5.25□□□□□ -1.57
CD44-237ENST00000534082 TMEM114B3SHH9 223 aa5.25□□□□□ -1.57
CD44-237ENST00000534082 MS4A18H0YCH9 400 aa5.25□□□□□ -1.57
CD44-237ENST00000534082 H0YHG0 523 aa5.25□□□□□ -1.57
CD44-237ENST00000534082 H3BQF6 201 aa5.25□□□□□ -1.57
CD44-237ENST00000534082 NPFFO15130 113 aa5.25□□□□□ -1.57
CD44-237ENST00000534082 OR2T1O43869 369 aa5.25□□□□□ -1.57
CD44-237ENST00000534082 DBIP07108 87 aaKnown RBP5.25□□□□□ -1.57
CD44-237ENST00000534082 CCDC159P0C7I6 412 aa5.25□□□□□ -1.57
CD44-237ENST00000534082 PRG2P13727 222 aa5.25□□□□□ -1.57
CD44-237ENST00000534082 FAHP16930 419 aa5.25□□□□□ -1.57
CD44-237ENST00000534082 EEF1B2P24534 225 aaKnown RBP5.25□□□□□ -1.57
CD44-237ENST00000534082 SAA4P35542 130 aa5.25□□□□□ -1.57
CD44-237ENST00000534082 GDI2P50395 445 aaKnown RBP5.25□□□□□ -1.57
CD44-237ENST00000534082 BIDP55957 195 aa5.25□□□□□ -1.57
CD44-237ENST00000534082 PRB3Q04118 309 aaPredicted RBP5.25□□□□□ -1.57
CD44-237ENST00000534082 MS4A18Q3C1V0 323 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms