RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 LMX1BO60663 402 aa8.2□□□□□ -1.1
SSBP3-215ENST00000533946 SLC16A7O60669 478 aa8.2□□□□□ -1.1
SSBP3-215ENST00000533946 TGFAP01135 160 aa8.2□□□□□ -1.1
SSBP3-215ENST00000533946 AVPP01185 164 aa8.2□□□□□ -1.1
SSBP3-215ENST00000533946 CST2P09228 141 aa8.2□□□□□ -1.1
SSBP3-215ENST00000533946 TACSTD2P09758 323 aa8.2□□□□□ -1.1
SSBP3-215ENST00000533946 RHCEP18577 417 aa8.2□□□□□ -1.1
SSBP3-215ENST00000533946 RPS27P42677 84 aaKnown RBP8.2□□□□□ -1.1
SSBP3-215ENST00000533946 MMP15P51511 669 aa8.2□□□□□ -1.1
SSBP3-215ENST00000533946 GALK2Q01415 458 aa8.2□□□□□ -1.1
SSBP3-215ENST00000533946 SPIBQ01892 262 aa8.2□□□□□ -1.1
SSBP3-215ENST00000533946 HSF2Q03933 536 aa8.2□□□□□ -1.1
SSBP3-215ENST00000533946 KRR1Q13601 381 aaKnown RBP8.2□□□□□ -1.1
SSBP3-215ENST00000533946 DGCR6Q14129 220 aa8.2□□□□□ -1.1
SSBP3-215ENST00000533946 HLXQ14774 488 aaPredicted RBP8.2□□□□□ -1.1
SSBP3-215ENST00000533946 SLC36A2Q495M3 483 aa8.2□□□□□ -1.1
SSBP3-215ENST00000533946 FAM120AOSQ5T036 256 aa8.2□□□□□ -1.1
SSBP3-215ENST00000533946 SLC35F1Q5T1Q4 408 aa8.2□□□□□ -1.1
SSBP3-215ENST00000533946 C1QTNF12Q5T7M4 302 aa8.2□□□□□ -1.1
SSBP3-215ENST00000533946 C1orf229Q6ZS94 237 aaPredicted RBP8.2□□□□□ -1.1
SSBP3-215ENST00000533946 PHC2Q8IXK0 858 aa8.2□□□□□ -1.1
SSBP3-215ENST00000533946 PGAM4Q8N0Y7 254 aa8.2□□□□□ -1.1
SSBP3-215ENST00000533946 OR9Q2Q8NGE9 314 aa8.2□□□□□ -1.1
SSBP3-215ENST00000533946 CLDND2Q8NHS1 167 aa8.2□□□□□ -1.1
SSBP3-215ENST00000533946 ABHD4Q8TB40 342 aa8.2□□□□□ -1.1
SSBP3-215ENST00000533946 SYNPRQ8TBG9 265 aa8.2□□□□□ -1.1
SSBP3-215ENST00000533946 C11orf40Q8WZ69 217 aa8.2□□□□□ -1.1
SSBP3-215ENST00000533946 ZNF570Q96NI8 536 aa8.2□□□□□ -1.1
SSBP3-215ENST00000533946 BTBD10Q9BSF8 475 aa8.2□□□□□ -1.1
SSBP3-215ENST00000533946 RACGAP1Q9H0H5 632 aa8.2□□□□□ -1.1
SSBP3-215ENST00000533946 EGLN3Q9H6Z9 239 aa8.2□□□□□ -1.1
SSBP3-215ENST00000533946 GORASP2Q9H8Y8 452 aa8.2□□□□□ -1.1
SSBP3-215ENST00000533946 MSL2Q9HCI7 577 aa8.2□□□□□ -1.1
SSBP3-215ENST00000533946 NRIP3Q9NQ35 241 aa8.2□□□□□ -1.1
SSBP3-215ENST00000533946 SLC7A8Q9UHI5 535 aa8.2□□□□□ -1.1
SSBP3-215ENST00000533946 TAGLN3Q9UI15 199 aa8.2□□□□□ -1.1
SSBP3-215ENST00000533946 ARL2BPQ9Y2Y0 163 aa8.2□□□□□ -1.1
SSBP3-215ENST00000533946 STARD10Q9Y365 291 aa8.2□□□□□ -1.1
SSBP3-215ENST00000533946 FKBP7Q9Y680 259 aa8.2□□□□□ -1.1
SSBP3-215ENST00000533946 WNK2Q9Y3S1 2297 aa8.19□□□□□ -1.1
SSBP3-215ENST00000533946 DYSFO75923 2080 aa8.19□□□□□ -1.1
SSBP3-215ENST00000533946 IGLV1-36A0A0B4J1U3 117 aa8.19□□□□□ -1.1
SSBP3-215ENST00000533946 OR6C68A6NDL8 312 aa8.19□□□□□ -1.1
SSBP3-215ENST00000533946 C17orf100A8MU93 164 aa8.19□□□□□ -1.1
SSBP3-215ENST00000533946 B2RBV5 119 aa8.19□□□□□ -1.1
SSBP3-215ENST00000533946 RER1O15258 196 aa8.19□□□□□ -1.1
SSBP3-215ENST00000533946 SPRY3O43610 288 aa8.19□□□□□ -1.1
SSBP3-215ENST00000533946 FARS2O95363 451 aaKnown RBP8.19□□□□□ -1.1
SSBP3-215ENST00000533946 SNAP29O95721 258 aa8.19□□□□□ -1.1
SSBP3-215ENST00000533946 IGHV1-46P01743 117 aa8.19□□□□□ -1.1
SSBP3-215ENST00000533946 TFP02787 698 aa8.19□□□□□ -1.1
SSBP3-215ENST00000533946 BMP4P12644 408 aa8.19□□□□□ -1.1
SSBP3-215ENST00000533946 HIST1H1CP16403 213 aaKnown RBP8.19□□□□□ -1.1
SSBP3-215ENST00000533946 SELEP16581 610 aa8.19□□□□□ -1.1
SSBP3-215ENST00000533946 RRM2P31350 389 aa8.19□□□□□ -1.1
SSBP3-215ENST00000533946 LMO4P61968 165 aa8.19□□□□□ -1.1
SSBP3-215ENST00000533946 MVKQ03426 396 aa8.19□□□□□ -1.1
SSBP3-215ENST00000533946 PSG7Q13046 419 aa8.19□□□□□ -1.1
SSBP3-215ENST00000533946 NKPD1Q17RQ9 610 aa8.19□□□□□ -1.1
SSBP3-215ENST00000533946 TBC1D28Q2M2D7 210 aa8.19□□□□□ -1.1
SSBP3-215ENST00000533946 ZNF362Q5T0B9 420 aaPredicted RBP8.19□□□□□ -1.1
SSBP3-215ENST00000533946 C1orf94Q6P1W5 598 aa8.19□□□□□ -1.1
SSBP3-215ENST00000533946 PGBD2Q6P3X8 592 aa8.19□□□□□ -1.1
SSBP3-215ENST00000533946 VASH1Q7L8A9 365 aaPredicted RBP8.19□□□□□ -1.1
SSBP3-215ENST00000533946 TMEM179BQ7Z7N9 219 aa8.19□□□□□ -1.1
SSBP3-215ENST00000533946 LINC00346Q8IVM7 164 aa8.19□□□□□ -1.1
SSBP3-215ENST00000533946 RNF113BQ8IZP6 322 aaKnown RBP8.19□□□□□ -1.1
SSBP3-215ENST00000533946 OR6V1Q8N148 313 aa8.19□□□□□ -1.1
SSBP3-215ENST00000533946 OR4C15Q8NGM1 316 aa8.19□□□□□ -1.1
SSBP3-215ENST00000533946 OR4K13Q8NH42 304 aa8.19□□□□□ -1.1
SSBP3-215ENST00000533946 KLF14Q8TD94 323 aaPredicted RBP8.19□□□□□ -1.1
SSBP3-215ENST00000533946 NEU4Q8WWR8 484 aaPredicted RBP8.19□□□□□ -1.1
SSBP3-215ENST00000533946 RBP7Q96R05 134 aa8.19□□□□□ -1.1
SSBP3-215ENST00000533946 NMNAT3Q96T66 252 aa8.19□□□□□ -1.1
SSBP3-215ENST00000533946 WDR76Q9H967 626 aa8.19□□□□□ -1.1
SSBP3-215ENST00000533946 SMURF2Q9HAU4 748 aa8.19□□□□□ -1.1
SSBP3-215ENST00000533946 SRA1Q9HD15 236 aaKnown RBP8.19□□□□□ -1.1
SSBP3-215ENST00000533946 CCNB1IP1Q9NPC3 277 aa8.19□□□□□ -1.1
SSBP3-215ENST00000533946 HINT3Q9NQE9 182 aaKnown RBP8.19□□□□□ -1.1
SSBP3-215ENST00000533946 GRHPRQ9UBQ7 328 aa8.19□□□□□ -1.1
SSBP3-215ENST00000533946 LHFPL6Q9Y693 200 aa8.19□□□□□ -1.1
SSBP3-215ENST00000533946 TANC2Q9HCD6 1990 aa8.19□□□□□ -1.1
SSBP3-215ENST00000533946 IQCMA0A1B0GVH7 501 aa8.18□□□□□ -1.1
SSBP3-215ENST00000533946 CENPBD1B2RD01 187 aa8.18□□□□□ -1.1
SSBP3-215ENST00000533946 H0YL77 283 aa8.18□□□□□ -1.1
SSBP3-215ENST00000533946 PPIHO43447 177 aaKnown RBP8.18□□□□□ -1.1
SSBP3-215ENST00000533946 RGS9O75916 674 aaPredicted RBP8.18□□□□□ -1.1
SSBP3-215ENST00000533946 NDUFB2O95178 105 aa8.18□□□□□ -1.1
SSBP3-215ENST00000533946 GASTP01350 101 aa8.18□□□□□ -1.1
SSBP3-215ENST00000533946 IGHV3-13P01766 116 aa8.18□□□□□ -1.1
SSBP3-215ENST00000533946 GAAP10253 952 aa8.18□□□□□ -1.1
SSBP3-215ENST00000533946 MSR1P21757 451 aa8.18□□□□□ -1.1
SSBP3-215ENST00000533946 PYCR1P32322 319 aa8.18□□□□□ -1.1
SSBP3-215ENST00000533946 APLNRP35414 380 aa8.18□□□□□ -1.1
SSBP3-215ENST00000533946 GSSP48637 474 aa8.18□□□□□ -1.1
SSBP3-215ENST00000533946 EVX1P49640 407 aa8.18□□□□□ -1.1
SSBP3-215ENST00000533946 GDI2P50395 445 aaKnown RBP8.18□□□□□ -1.1
SSBP3-215ENST00000533946 KLF3P57682 345 aaPredicted RBP8.18□□□□□ -1.1
SSBP3-215ENST00000533946 PPP1CBP62140 327 aa8.18□□□□□ -1.1
SSBP3-215ENST00000533946 CR1LQ2VPA4 569 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms