RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 FOXL2NBQ6ZUU3 175 aa13.19□□□□□ -0.3
CPSF1-211ENST00000533492 CPLX4Q7Z7G2 160 aa13.19□□□□□ -0.3
CPSF1-211ENST00000533492 SYT9Q86SS6 491 aa13.19□□□□□ -0.3
CPSF1-211ENST00000533492 PHC2Q8IXK0 858 aa13.19□□□□□ -0.3
CPSF1-211ENST00000533492 ZNF101Q8IZC7 436 aa13.19□□□□□ -0.3
CPSF1-211ENST00000533492 CLDND2Q8NHS1 167 aa13.19□□□□□ -0.3
CPSF1-211ENST00000533492 ABHD4Q8TB40 342 aa13.19□□□□□ -0.3
CPSF1-211ENST00000533492 SLC7A13Q8TCU3 470 aa13.19□□□□□ -0.3
CPSF1-211ENST00000533492 C1orf159Q96HA4 380 aa13.19□□□□□ -0.3
CPSF1-211ENST00000533492 FAM46AQ96IP4 442 aaKnown RBP13.19□□□□□ -0.3
CPSF1-211ENST00000533492 Q96M85 177 aa13.19□□□□□ -0.3
CPSF1-211ENST00000533492 ZNF570Q96NI8 536 aa13.19□□□□□ -0.3
CPSF1-211ENST00000533492 WNT5BQ9H1J7 359 aa13.19□□□□□ -0.3
CPSF1-211ENST00000533492 ELOVL3Q9HB03 270 aa13.19□□□□□ -0.3
CPSF1-211ENST00000533492 KRCC1Q9NPI7 259 aaPredicted RBP13.19□□□□□ -0.3
CPSF1-211ENST00000533492 NKIRAS2Q9NYR9 191 aa13.19□□□□□ -0.3
CPSF1-211ENST00000533492 SAMD4AQ9UPU9 718 aaKnown RBP13.19□□□□□ -0.3
CPSF1-211ENST00000533492 AURKCQ9UQB9 309 aa13.19□□□□□ -0.3
CPSF1-211ENST00000533492 ADAM18Q9Y3Q7 739 aa13.19□□□□□ -0.3
CPSF1-211ENST00000533492 CUBNO60494 3623 aa13.18□□□□□ -0.3
CPSF1-211ENST00000533492 A0A1W2PRQ8 180 aa13.18□□□□□ -0.3
CPSF1-211ENST00000533492 AHCYL1O43865 530 aa13.18□□□□□ -0.3
CPSF1-211ENST00000533492 NDUFB2O95178 105 aa13.18□□□□□ -0.3
CPSF1-211ENST00000533492 TFP02787 698 aa13.18□□□□□ -0.3
CPSF1-211ENST00000533492 WNT5AP41221 380 aa13.18□□□□□ -0.3
CPSF1-211ENST00000533492 CRYBB2P43320 205 aa13.18□□□□□ -0.3
CPSF1-211ENST00000533492 ZNF81P51508 661 aa13.18□□□□□ -0.3
CPSF1-211ENST00000533492 ARHGDIAP52565 204 aa13.18□□□□□ -0.3
CPSF1-211ENST00000533492 DVL1P1P54792 670 aaPredicted RBP13.18□□□□□ -0.3
CPSF1-211ENST00000533492 DGCR6Q14129 220 aa13.18□□□□□ -0.3
CPSF1-211ENST00000533492 ZNF774Q6NX45 483 aa13.18□□□□□ -0.3
CPSF1-211ENST00000533492 TSEN54Q7Z6J9 526 aaKnown RBP13.18□□□□□ -0.3
CPSF1-211ENST00000533492 GLCCI1Q86VQ1 547 aa13.18□□□□□ -0.3
CPSF1-211ENST00000533492 RNF148Q8N7C7 305 aa13.18□□□□□ -0.3
CPSF1-211ENST00000533492 FAM156AQ8NDB6 213 aa13.18□□□□□ -0.3
CPSF1-211ENST00000533492 SLC25A40Q8TBP6 338 aa13.18□□□□□ -0.3
CPSF1-211ENST00000533492 MARS2Q96GW9 593 aaKnown RBP13.18□□□□□ -0.3
CPSF1-211ENST00000533492 WACQ9BTA9 647 aa13.18□□□□□ -0.3
CPSF1-211ENST00000533492 REPIN1Q9BWE0 567 aaKnown RBP13.18□□□□□ -0.3
CPSF1-211ENST00000533492 OR2J1Q9GZK6 312 aa13.18□□□□□ -0.3
CPSF1-211ENST00000533492 RERGLQ9H628 205 aa13.18□□□□□ -0.3
CPSF1-211ENST00000533492 POLE4Q9NR33 117 aa13.18□□□□□ -0.3
CPSF1-211ENST00000533492 DCAF13Q9NV06 445 aaKnown RBP13.18□□□□□ -0.3
CPSF1-211ENST00000533492 TREM2Q9NZC2 230 aa13.18□□□□□ -0.3
CPSF1-211ENST00000533492 NDUFAF4Q9P032 175 aa13.18□□□□□ -0.3
CPSF1-211ENST00000533492 NDRG4Q9ULP0 352 aaKnown RBP13.18□□□□□ -0.3
CPSF1-211ENST00000533492 DNHD1Q96M86 4753 aa13.17□□□□□ -0.3
CPSF1-211ENST00000533492 IGHV1-69-2A0A0G2JMI3 117 aa13.17□□□□□ -0.3
CPSF1-211ENST00000533492 PRSS37A4D1T9 235 aa13.17□□□□□ -0.3
CPSF1-211ENST00000533492 SPRY3O43610 288 aa13.17□□□□□ -0.3
CPSF1-211ENST00000533492 SNX3O60493 162 aa13.17□□□□□ -0.3
CPSF1-211ENST00000533492 RP2O75695 350 aa13.17□□□□□ -0.3
CPSF1-211ENST00000533492 PPP1CBP62140 327 aa13.17□□□□□ -0.3
CPSF1-211ENST00000533492 SCRN3Q0VDG4 424 aa13.17□□□□□ -0.3
CPSF1-211ENST00000533492 ENDOGQ14249 297 aaKnown RBP13.17□□□□□ -0.3
CPSF1-211ENST00000533492 GPR139Q6DWJ6 353 aa13.17□□□□□ -0.3
CPSF1-211ENST00000533492 USP51Q70EK9 711 aa13.17□□□□□ -0.3
CPSF1-211ENST00000533492 OR52J3Q8NH60 311 aa13.17□□□□□ -0.3
CPSF1-211ENST00000533492 KLF14Q8TD94 323 aaPredicted RBP13.17□□□□□ -0.3
CPSF1-211ENST00000533492 IPCEF1Q8WWN9 437 aaPredicted RBP13.17□□□□□ -0.3
CPSF1-211ENST00000533492 C4orf45Q96LM5 186 aa13.17□□□□□ -0.3
CPSF1-211ENST00000533492 RACGAP1Q9H0H5 632 aa13.17□□□□□ -0.3
CPSF1-211ENST00000533492 SAP30LQ9HAJ7 183 aa13.17□□□□□ -0.3
CPSF1-211ENST00000533492 LPAR2Q9HBW0 351 aa13.17□□□□□ -0.3
CPSF1-211ENST00000533492 EMC7Q9NPA0 242 aa13.17□□□□□ -0.3
CPSF1-211ENST00000533492 CYSLTR2Q9NS75 346 aa13.17□□□□□ -0.3
CPSF1-211ENST00000533492 SIGLEC7Q9Y286 467 aa13.17□□□□□ -0.3
CPSF1-211ENST00000533492 TEX13CA0A0J9YWL9 993 aa13.16□□□□□ -0.3
CPSF1-211ENST00000533492 WNT9BO14905 357 aa13.16□□□□□ -0.3
CPSF1-211ENST00000533492 PTP4A3O75365 173 aa13.16□□□□□ -0.3
CPSF1-211ENST00000533492 KHDRBS3O75525 346 aaKnown RBP13.16□□□□□ -0.3
CPSF1-211ENST00000533492 DIRAS1O95057 198 aa13.16□□□□□ -0.3
CPSF1-211ENST00000533492 ABHD16AO95870 558 aa13.16□□□□□ -0.3
CPSF1-211ENST00000533492 NGFP01138 241 aa13.16□□□□□ -0.3
CPSF1-211ENST00000533492 SCG5P05408 212 aa13.16□□□□□ -0.3
CPSF1-211ENST00000533492 ZNF26P17031 533 aaPredicted RBP13.16□□□□□ -0.3
CPSF1-211ENST00000533492 ITGA2P17301 1181 aa13.16□□□□□ -0.3
CPSF1-211ENST00000533492 SDHAP31040 664 aa13.16□□□□□ -0.3
CPSF1-211ENST00000533492 LIPAP38571 399 aa13.16□□□□□ -0.3
CPSF1-211ENST00000533492 MPV17P39210 176 aa13.16□□□□□ -0.3
CPSF1-211ENST00000533492 SMIM11AP58511 58 aa13.16□□□□□ -0.3
CPSF1-211ENST00000533492 MVKQ03426 396 aa13.16□□□□□ -0.3
CPSF1-211ENST00000533492 KRR1Q13601 381 aaKnown RBP13.16□□□□□ -0.3
CPSF1-211ENST00000533492 HFEQ30201 348 aa13.16□□□□□ -0.3
CPSF1-211ENST00000533492 MESTQ5EB52 335 aa13.16□□□□□ -0.3
CPSF1-211ENST00000533492 FAM209AQ5JX71 171 aa13.16□□□□□ -0.3
CPSF1-211ENST00000533492 LIPNQ5VXI9 398 aa13.16□□□□□ -0.3
CPSF1-211ENST00000533492 MBNL2Q5VZF2 373 aaKnown RBP13.16□□□□□ -0.3
CPSF1-211ENST00000533492 RINLQ6ZS11 566 aa13.16□□□□□ -0.3
CPSF1-211ENST00000533492 RFPL4BQ6ZWI9 263 aa13.16□□□□□ -0.3
CPSF1-211ENST00000533492 FAM122BQ7Z309 247 aa13.16□□□□□ -0.3
CPSF1-211ENST00000533492 GTF3AQ92664 365 aaKnown RBP13.16□□□□□ -0.3
CPSF1-211ENST00000533492 RASD2Q96D21 266 aa13.16□□□□□ -0.3
CPSF1-211ENST00000533492 ELMOD3Q96FG2 381 aa13.16□□□□□ -0.3
CPSF1-211ENST00000533492 TIMD4Q96H15 378 aa13.16□□□□□ -0.3
CPSF1-211ENST00000533492 RSRC1Q96IZ7 334 aaKnown RBP13.16□□□□□ -0.3
CPSF1-211ENST00000533492 C7orf34Q96L11 122 aa13.16□□□□□ -0.3
CPSF1-211ENST00000533492 EGLN1Q9GZT9 426 aa13.16□□□□□ -0.3
CPSF1-211ENST00000533492 GORASP2Q9H8Y8 452 aa13.16□□□□□ -0.3
CPSF1-211ENST00000533492 NRIP3Q9NQ35 241 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms