RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 RNF152Q8N8N0 203 aa4.95□□□□□ -1.62
CD44-236ENST00000533222 C8orf58Q8NAV2 365 aa4.95□□□□□ -1.62
CD44-236ENST00000533222 CYB561A3Q8NBI2 242 aa4.95□□□□□ -1.62
CD44-236ENST00000533222 OR11H7Q8NGC8 314 aa4.95□□□□□ -1.62
CD44-236ENST00000533222 OR10AD1Q8NGE0 317 aa4.95□□□□□ -1.62
CD44-236ENST00000533222 OR52L2PQ8NGH6 319 aa4.95□□□□□ -1.62
CD44-236ENST00000533222 OR4D5Q8NGN0 318 aa4.95□□□□□ -1.62
CD44-236ENST00000533222 OR10K1Q8NGX5 313 aa4.95□□□□□ -1.62
CD44-236ENST00000533222 RPLP0P6Q8NHW5 317 aa4.95□□□□□ -1.62
CD44-236ENST00000533222 SKA2Q8WVK7 121 aaPredicted RBP4.95□□□□□ -1.62
CD44-236ENST00000533222 APH1BQ8WW43 257 aa4.95□□□□□ -1.62
CD44-236ENST00000533222 FAM151AQ8WW52 585 aa4.95□□□□□ -1.62
CD44-236ENST00000533222 SORCS1Q8WY21 1168 aa4.95□□□□□ -1.62
CD44-236ENST00000533222 SLC25A46Q96AG3 418 aa4.95□□□□□ -1.62
CD44-236ENST00000533222 COQ8BQ96D53 544 aa4.95□□□□□ -1.62
CD44-236ENST00000533222 FBXO17Q96EF6 278 aa4.95□□□□□ -1.62
CD44-236ENST00000533222 AKR1E2Q96JD6 320 aa4.95□□□□□ -1.62
CD44-236ENST00000533222 POM121L2Q96KW2 1035 aa4.95□□□□□ -1.62
CD44-236ENST00000533222 IL4I1Q96RQ9 567 aa4.95□□□□□ -1.62
CD44-236ENST00000533222 COPS8Q99627 209 aa4.95□□□□□ -1.62
CD44-236ENST00000533222 PITX2Q99697 317 aa4.95□□□□□ -1.62
CD44-236ENST00000533222 CCDC3Q9BQI4 270 aa4.95□□□□□ -1.62
CD44-236ENST00000533222 NRIP2Q9BQI9 281 aa4.95□□□□□ -1.62
CD44-236ENST00000533222 FNDC11Q9BVV2 318 aa4.95□□□□□ -1.62
CD44-236ENST00000533222 CDCA4Q9BXL8 241 aa4.95□□□□□ -1.62
CD44-236ENST00000533222 MS4A8Q9BY19 250 aa4.95□□□□□ -1.62
CD44-236ENST00000533222 TPSD1Q9BZJ3 242 aa4.95□□□□□ -1.62
CD44-236ENST00000533222 AMBRA1Q9C0C7 1298 aa4.95□□□□□ -1.62
CD44-236ENST00000533222 CHST8Q9H2A9 424 aa4.95□□□□□ -1.62
CD44-236ENST00000533222 CWH43Q9H720 699 aa4.95□□□□□ -1.62
CD44-236ENST00000533222 ZBTB20Q9HC78 741 aaPredicted RBP4.95□□□□□ -1.62
CD44-236ENST00000533222 MMP26Q9NRE1 261 aa4.95□□□□□ -1.62
CD44-236ENST00000533222 CYSLTR2Q9NS75 346 aa4.95□□□□□ -1.62
CD44-236ENST00000533222 TMEM100Q9NV29 134 aa4.95□□□□□ -1.62
CD44-236ENST00000533222 TMEM160Q9NX00 188 aa4.95□□□□□ -1.62
CD44-236ENST00000533222 SPANXCQ9NY87 97 aa4.95□□□□□ -1.62
CD44-236ENST00000533222 TAS2R13Q9NYV9 303 aa4.95□□□□□ -1.62
CD44-236ENST00000533222 PRODH2Q9UF12 536 aa4.95□□□□□ -1.62
CD44-236ENST00000533222 STEAP1Q9UHE8 339 aa4.95□□□□□ -1.62
CD44-236ENST00000533222 VAX2Q9UIW0 290 aa4.95□□□□□ -1.62
CD44-236ENST00000533222 OSGIN2Q9Y236 505 aa4.95□□□□□ -1.62
CD44-236ENST00000533222 CD163L1Q9NR16 1453 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 MICAL3Q7RTP6 2002 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 LAMB2P55268 1798 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 A0A096LPI6 279 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 TRBV7-9A0A0J9YWB2 115 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 TRBV2A0A0J9YWF9 115 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 PRORSD1PA6NEY8 169 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 NAP1L6A6NFF2 107 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 ANKRD61A6NGH8 418 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 IFITM10A6NMD0 228 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 DHRS7CA6NNS2 312 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 CORTO00230 105 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 SLC17A3O00476 420 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 ADAM20O43506 726 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 TLX3O43711 291 aaPredicted RBP4.94□□□□□ -1.62
CD44-236ENST00000533222 EIF4E2O60573 245 aaKnown RBP4.94□□□□□ -1.62
CD44-236ENST00000533222 FSHBP01225 129 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 IGHG3P01860 377 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 TCRBP04435 133 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 HIST1H2ABP04908 130 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 IL5P05113 134 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 SFTPBP07988 381 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 CHRM2P08172 466 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 OR5H8P0DN80 308 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 CD37P11049 281 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 CD22P20273 847 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 MMP11P24347 488 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 ACKR3P25106 362 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 HTR1EP28566 365 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 MPGP29372 298 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 PIGAP37287 484 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 PBX3P40426 434 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 LGALS7P47929 136 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 KLK7P49862 253 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 CRYBA4P53673 196 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 CRISP1P54107 249 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 CDH12P55289 794 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 WNT3P56703 355 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 BACE1P56817 501 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 TBPL1P62380 186 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 FABP5Q01469 135 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 FOXI1Q12951 378 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 SRSF6Q13247 344 aaKnown RBP4.94□□□□□ -1.62
CD44-236ENST00000533222 PMS2P11Q13670 270 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 NTRK2Q16620 822 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 PRSS8Q16651 343 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 TCTN1Q2MV58 587 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 ZNF284Q2VY69 593 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 AGKQ53H12 422 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 RAB6CQ53S08 254 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 XKR7Q5GH72 579 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 TMEM69Q5SWH9 247 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 ABHD17BQ5VST6 288 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 TMEM268Q5VZI3 342 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 DNAJC24Q6P3W2 148 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 TMEM88Q6PEY1 159 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 ZNF790Q6PG37 636 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 FAM131AQ6UXB0 335 aa4.94□□□□□ -1.62
CD44-236ENST00000533222 AHSA2Q719I0 299 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms