RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 CLN6Q9NWW5 311 aa9.84□□□□□ -0.83
TRAPPC4-213ENST00000533149 KLHL13Q9P2N7 655 aa9.84□□□□□ -0.83
TRAPPC4-213ENST00000533149 MYRFQ9Y2G1 1151 aa9.84□□□□□ -0.83
TRAPPC4-213ENST00000533149 CADP27708 2225 aa9.84□□□□□ -0.83
TRAPPC4-213ENST00000533149 C11orf98E9PRG8 122 aa9.83□□□□□ -0.84
TRAPPC4-213ENST00000533149 ARPC3O15145 178 aa9.83□□□□□ -0.84
TRAPPC4-213ENST00000533149 RNF13O43567 381 aa9.83□□□□□ -0.84
TRAPPC4-213ENST00000533149 IDH3BO43837 385 aa9.83□□□□□ -0.84
TRAPPC4-213ENST00000533149 ENTPD6O75354 484 aa9.83□□□□□ -0.84
TRAPPC4-213ENST00000533149 AKR7A3O95154 331 aa9.83□□□□□ -0.84
TRAPPC4-213ENST00000533149 PMS2P2O95744 297 aa9.83□□□□□ -0.84
TRAPPC4-213ENST00000533149 DIO1P49895 249 aa9.83□□□□□ -0.84
TRAPPC4-213ENST00000533149 LGALS3BPQ08380 585 aa9.83□□□□□ -0.84
TRAPPC4-213ENST00000533149 CARTPTQ16568 116 aa9.83□□□□□ -0.84
TRAPPC4-213ENST00000533149 OCLNQ16625 522 aa9.83□□□□□ -0.84
TRAPPC4-213ENST00000533149 SMN1Q16637 294 aaKnown RBP9.83□□□□□ -0.84
TRAPPC4-213ENST00000533149 RBM48Q5RL73 367 aaKnown RBP9.83□□□□□ -0.84
TRAPPC4-213ENST00000533149 ZNF362Q5T0B9 420 aaPredicted RBP9.83□□□□□ -0.84
TRAPPC4-213ENST00000533149 HBMQ6B0K9 141 aa9.83□□□□□ -0.84
TRAPPC4-213ENST00000533149 Q6ZT83 130 aa9.83□□□□□ -0.84
TRAPPC4-213ENST00000533149 NUFIP2Q7Z417 695 aaKnown RBP9.83□□□□□ -0.84
TRAPPC4-213ENST00000533149 BCDIN3DQ7Z5W3 292 aaKnown RBP9.83□□□□□ -0.84
TRAPPC4-213ENST00000533149 CCDC103Q8IW40 242 aa9.83□□□□□ -0.84
TRAPPC4-213ENST00000533149 KDM8Q8N371 416 aa9.83□□□□□ -0.84
TRAPPC4-213ENST00000533149 TMEM99Q8N816 258 aa9.83□□□□□ -0.84
TRAPPC4-213ENST00000533149 LINC01356Q8N9X3 169 aa9.83□□□□□ -0.84
TRAPPC4-213ENST00000533149 BPIFB6Q8NFQ5 453 aa9.83□□□□□ -0.84
TRAPPC4-213ENST00000533149 HPS1Q92902 700 aa9.83□□□□□ -0.84
TRAPPC4-213ENST00000533149 KATNB1Q9BVA0 655 aa9.83□□□□□ -0.84
TRAPPC4-213ENST00000533149 PRRG3Q9BZD7 231 aa9.83□□□□□ -0.84
TRAPPC4-213ENST00000533149 METTL17Q9H7H0 456 aaPredicted RBP9.83□□□□□ -0.84
TRAPPC4-213ENST00000533149 TIGARQ9NQ88 270 aa9.83□□□□□ -0.84
TRAPPC4-213ENST00000533149 CMC2Q9NRP2 79 aa9.83□□□□□ -0.84
TRAPPC4-213ENST00000533149 INIPQ9NRY2 104 aa9.83□□□□□ -0.84
TRAPPC4-213ENST00000533149 NPAP1Q9NZP6 1156 aa9.83□□□□□ -0.84
TRAPPC4-213ENST00000533149 ZNF346Q9UL40 294 aaKnown RBP9.83□□□□□ -0.84
TRAPPC4-213ENST00000533149 TENM1Q9UKZ4 2725 aa9.83□□□□□ -0.84
TRAPPC4-213ENST00000533149 RIIAD1A6NNX1 92 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 IMPA2O14732 288 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 TNFSF11O14788 317 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 LYZL6O75951 148 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 TNFAIP8O95379 198 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 TXNDC12O95881 172 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 YES1P07947 543 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 NOS3P29474 1203 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 P2RY4P51582 365 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 CARD18P57730 90 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 CXCR4P61073 352 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 CSNK2BP67870 215 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 CSNK2A1P68400 391 aaPredicted RBP9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 TEKQ02763 1124 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 AWAT1Q58HT5 328 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 SLC25A30Q5SVS4 291 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 TREML4Q6UXN2 200 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 PEG10Q86TG7 708 aaKnown RBP9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 CPOQ8IVL8 374 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 TUSC5Q8IXB3 177 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 OR52E2Q8NGJ4 325 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 RNF128Q8TEB7 428 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 ABHD3Q8WU67 409 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 Q96M85 177 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 Q96MT0 163 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 JMJD8Q96S16 334 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 NAA11Q9BSU3 229 aaPredicted RBP9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 SOX7Q9BT81 388 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 ZNF747Q9BV97 191 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 PLCXD1Q9NUJ7 323 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 SCN3BQ9NY72 215 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 DNAJC27Q9NZQ0 273 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 KLHL21Q9UJP4 597 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 ADAM18Q9Y3Q7 739 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 TEX13CA0A0J9YWL9 993 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 ZNF814B7Z6K7 855 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 PTGES3LE9PB15 166 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 SLC1A7O00341 560 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 XPNPEP2O43895 674 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 EIF1BO60739 113 aaKnown RBP9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 FAM20BO75063 409 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 SERPINI2O75830 405 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 IFNGP01579 166 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 CCDC159P0C7I6 412 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 HLA-DOBP13765 273 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 HIST1H1CP16403 213 aaKnown RBP9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 CRHBPP24387 322 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 CD40P25942 277 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 APOBEC3AP31941 199 aaPredicted RBP9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 RAC3P60763 192 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 H3F3AP84243 136 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 PUDPQ08623 228 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 ZNF239Q16600 458 aaKnown RBP9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 KCTD21Q4G0X4 260 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 AADACL4Q5VUY2 407 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 MEDAGQ5VYS4 303 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 GPR139Q6DWJ6 353 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 TMEM225Q6GV28 225 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 PAQR6Q6TCH4 344 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 NHLRC1Q6VVB1 395 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 USP43Q70EL4 1123 aa9.82□□□□□ -0.84
TRAPPC4-213ENST00000533149 FAM122BQ7Z309 247 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms