RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 B2RBV5 119 aa14.76□□□□□ -0.05
PHRF1-204ENST00000532550 LMX1BO60663 402 aa14.76□□□□□ -0.05
PHRF1-204ENST00000532550 IFNA2P01563 188 aa14.76□□□□□ -0.05
PHRF1-204ENST00000532550 HPXP02790 462 aa14.76□□□□□ -0.05
PHRF1-204ENST00000532550 SEMG1P04279 462 aa14.76□□□□□ -0.05
PHRF1-204ENST00000532550 FABP3P05413 133 aa14.76□□□□□ -0.05
PHRF1-204ENST00000532550 ZNF16P17020 682 aaPredicted RBP14.76□□□□□ -0.05
PHRF1-204ENST00000532550 COL8A2P25067 703 aa14.76□□□□□ -0.05
PHRF1-204ENST00000532550 GCH1P30793 250 aa14.76□□□□□ -0.05
PHRF1-204ENST00000532550 CHN2P52757 468 aa14.76□□□□□ -0.05
PHRF1-204ENST00000532550 KRR1Q13601 381 aaKnown RBP14.76□□□□□ -0.05
PHRF1-204ENST00000532550 RIN1Q13671 783 aa14.76□□□□□ -0.05
PHRF1-204ENST00000532550 ZNF718Q3SXZ3 478 aa14.76□□□□□ -0.05
PHRF1-204ENST00000532550 FAM166AQ6J272 317 aa14.76□□□□□ -0.05
PHRF1-204ENST00000532550 C1orf174Q8IYL3 243 aa14.76□□□□□ -0.05
PHRF1-204ENST00000532550 RASD2Q96D21 266 aa14.76□□□□□ -0.05
PHRF1-204ENST00000532550 NSL1Q96IY1 281 aa14.76□□□□□ -0.05
PHRF1-204ENST00000532550 BEX2Q9BXY8 128 aa14.76□□□□□ -0.05
PHRF1-204ENST00000532550 WNT5BQ9H1J7 359 aa14.76□□□□□ -0.05
PHRF1-204ENST00000532550 RERGLQ9H628 205 aa14.76□□□□□ -0.05
PHRF1-204ENST00000532550 HINT3Q9NQE9 182 aaKnown RBP14.76□□□□□ -0.05
PHRF1-204ENST00000532550 TMEM160Q9NX00 188 aa14.76□□□□□ -0.05
PHRF1-204ENST00000532550 CDC42EP3Q9UKI2 254 aa14.76□□□□□ -0.05
PHRF1-204ENST00000532550 LRP5LA4QPB2 252 aa14.75□□□□□ -0.05
PHRF1-204ENST00000532550 C17orf100A8MU93 164 aa14.75□□□□□ -0.05
PHRF1-204ENST00000532550 SOCS2O14508 198 aa14.75□□□□□ -0.05
PHRF1-204ENST00000532550 OR10H3O60404 316 aa14.75□□□□□ -0.05
PHRF1-204ENST00000532550 SLC16A7O60669 478 aa14.75□□□□□ -0.05
PHRF1-204ENST00000532550 KHDRBS3O75525 346 aaKnown RBP14.75□□□□□ -0.05
PHRF1-204ENST00000532550 TGFAP01135 160 aa14.75□□□□□ -0.05
PHRF1-204ENST00000532550 MT-ND5P03915 603 aa14.75□□□□□ -0.05
PHRF1-204ENST00000532550 SCG5P05408 212 aa14.75□□□□□ -0.05
PHRF1-204ENST00000532550 IFNGR2P38484 337 aa14.75□□□□□ -0.05
PHRF1-204ENST00000532550 ENDOGQ14249 297 aaKnown RBP14.75□□□□□ -0.05
PHRF1-204ENST00000532550 ELFN2Q5R3F8 820 aa14.75□□□□□ -0.05
PHRF1-204ENST00000532550 ZNF774Q6NX45 483 aa14.75□□□□□ -0.05
PHRF1-204ENST00000532550 SMARCD3Q6STE5 483 aa14.75□□□□□ -0.05
PHRF1-204ENST00000532550 ARL9Q6T311 187 aa14.75□□□□□ -0.05
PHRF1-204ENST00000532550 UGT2A3Q6UWM9 527 aa14.75□□□□□ -0.05
PHRF1-204ENST00000532550 THSD4Q6ZMP0 1018 aa14.75□□□□□ -0.05
PHRF1-204ENST00000532550 ZER1Q7Z7L7 766 aa14.75□□□□□ -0.05
PHRF1-204ENST00000532550 FITM2Q8N6M3 262 aa14.75□□□□□ -0.05
PHRF1-204ENST00000532550 MSI2Q96DH6 328 aaKnown RBP14.75□□□□□ -0.05
PHRF1-204ENST00000532550 GPX7Q96SL4 187 aaPredicted RBP14.75□□□□□ -0.05
PHRF1-204ENST00000532550 FUZQ9BT04 418 aa14.75□□□□□ -0.05
PHRF1-204ENST00000532550 SYT4Q9H2B2 425 aa14.75□□□□□ -0.05
PHRF1-204ENST00000532550 CHODLQ9H9P2 273 aa14.75□□□□□ -0.05
PHRF1-204ENST00000532550 ELOVL3Q9HB03 270 aa14.75□□□□□ -0.05
PHRF1-204ENST00000532550 EMC7Q9NPA0 242 aa14.75□□□□□ -0.05
PHRF1-204ENST00000532550 IL1RAPQ9NPH3 570 aa14.75□□□□□ -0.05
PHRF1-204ENST00000532550 KCNS2Q9ULS6 477 aa14.75□□□□□ -0.05
PHRF1-204ENST00000532550 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.75□□□□□ -0.056e-7■■■□□ 16.9
PHRF1-204ENST00000532550 LILRA1O75019 489 aa14.74□□□□□ -0.05
PHRF1-204ENST00000532550 IGHV3-13P01766 116 aa14.74□□□□□ -0.05
PHRF1-204ENST00000532550 TACSTD2P09758 323 aa14.74□□□□□ -0.05
PHRF1-204ENST00000532550 CTLA4P16410 223 aa14.74□□□□□ -0.05
PHRF1-204ENST00000532550 ACHEP22303 614 aa14.74□□□□□ -0.05
PHRF1-204ENST00000532550 RRM2P31350 389 aa14.74□□□□□ -0.05
PHRF1-204ENST00000532550 WNT5AP41221 380 aa14.74□□□□□ -0.05
PHRF1-204ENST00000532550 ARHGDIAP52565 204 aa14.74□□□□□ -0.05
PHRF1-204ENST00000532550 TMEM33P57088 247 aa14.74□□□□□ -0.05
PHRF1-204ENST00000532550 SCRN3Q0VDG4 424 aa14.74□□□□□ -0.05
PHRF1-204ENST00000532550 RFX4Q33E94 735 aa14.74□□□□□ -0.05
PHRF1-204ENST00000532550 PCGF3Q3KNV8 242 aa14.74□□□□□ -0.05
PHRF1-204ENST00000532550 ADCK1Q86TW2 530 aa14.74□□□□□ -0.05
PHRF1-204ENST00000532550 ZDHHC21Q8IVQ6 265 aa14.74□□□□□ -0.05
PHRF1-204ENST00000532550 GLB1L2Q8IW92 636 aa14.74□□□□□ -0.05
PHRF1-204ENST00000532550 ZNF101Q8IZC7 436 aa14.74□□□□□ -0.05
PHRF1-204ENST00000532550 ABHD4Q8TB40 342 aa14.74□□□□□ -0.05
PHRF1-204ENST00000532550 HPS1Q92902 700 aa14.74□□□□□ -0.05
PHRF1-204ENST00000532550 ERMAPQ96PL5 475 aaPredicted RBP14.74□□□□□ -0.05
PHRF1-204ENST00000532550 GPA33Q99795 319 aa14.74□□□□□ -0.05
PHRF1-204ENST00000532550 SHARPINQ9H0F6 387 aa14.74□□□□□ -0.05
PHRF1-204ENST00000532550 VSX1Q9NZR4 365 aaPredicted RBP14.74□□□□□ -0.05
PHRF1-204ENST00000532550 LPAR3Q9UBY5 353 aa14.74□□□□□ -0.05
PHRF1-204ENST00000532550 NDRG4Q9ULP0 352 aaKnown RBP14.74□□□□□ -0.05
PHRF1-204ENST00000532550 COA3Q9Y2R0 106 aaPredicted RBP14.74□□□□□ -0.05
PHRF1-204ENST00000532550 DYNC1I1O14576 645 aa14.73□□□□□ -0.05
PHRF1-204ENST00000532550 KRT36O76013 467 aa14.73□□□□□ -0.05
PHRF1-204ENST00000532550 TXNDC12O95881 172 aa14.73□□□□□ -0.05
PHRF1-204ENST00000532550 COX5BP10606 129 aa14.73□□□□□ -0.05
PHRF1-204ENST00000532550 MAGEB1P43366 347 aa14.73□□□□□ -0.05
PHRF1-204ENST00000532550 GPR6P46095 362 aaPredicted RBP14.73□□□□□ -0.05
PHRF1-204ENST00000532550 FXYD6P3P58550 94 aa14.73□□□□□ -0.05
PHRF1-204ENST00000532550 CCL8P80075 99 aa14.73□□□□□ -0.05
PHRF1-204ENST00000532550 MRPS11P82912 194 aaKnown RBP14.73□□□□□ -0.05
PHRF1-204ENST00000532550 SPATA46Q5T0L3 261 aa14.73□□□□□ -0.05
PHRF1-204ENST00000532550 CYP2R1Q6VVX0 501 aa14.73□□□□□ -0.05
PHRF1-204ENST00000532550 ARHGAP24Q8N264 748 aa14.73□□□□□ -0.05
PHRF1-204ENST00000532550 CCDC197Q8NCU1 140 aa14.73□□□□□ -0.05
PHRF1-204ENST00000532550 SLC25A40Q8TBP6 338 aa14.73□□□□□ -0.05
PHRF1-204ENST00000532550 MARS2Q96GW9 593 aaKnown RBP14.73□□□□□ -0.05
PHRF1-204ENST00000532550 C4orf45Q96LM5 186 aa14.73□□□□□ -0.05
PHRF1-204ENST00000532550 SNX18Q96RF0 628 aa14.73□□□□□ -0.05
PHRF1-204ENST00000532550 OR2J1Q9GZK6 312 aa14.73□□□□□ -0.05
PHRF1-204ENST00000532550 NUAK2Q9H093 628 aa14.73□□□□□ -0.05
PHRF1-204ENST00000532550 DECR2Q9NUI1 292 aa14.73□□□□□ -0.05
PHRF1-204ENST00000532550 ACTR3BQ9P1U1 418 aa14.73□□□□□ -0.05
PHRF1-204ENST00000532550 PLSCR5A0PG75 271 aa14.72□□□□□ -0.05
PHRF1-204ENST00000532550 IMPA2O14732 288 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms