RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 VENTXO95231 258 aa14.3□□□□□ -0.12
CPSF1-207ENST00000531727 PNPP00491 289 aa14.3□□□□□ -0.12
CPSF1-207ENST00000531727 IGHV1-46P01743 117 aa14.3□□□□□ -0.12
CPSF1-207ENST00000531727 IGHV2-5P01817 119 aa14.3□□□□□ -0.12
CPSF1-207ENST00000531727 MSR1P21757 451 aa14.3□□□□□ -0.12
CPSF1-207ENST00000531727 PPP1CBP62140 327 aa14.3□□□□□ -0.12
CPSF1-207ENST00000531727 LIPEQ05469 1076 aa14.3□□□□□ -0.12
CPSF1-207ENST00000531727 ENDOGQ14249 297 aaKnown RBP14.3□□□□□ -0.12
CPSF1-207ENST00000531727 FAHD2BQ6P2I3 314 aaPredicted RBP14.3□□□□□ -0.12
CPSF1-207ENST00000531727 SYT9Q86SS6 491 aa14.3□□□□□ -0.12
CPSF1-207ENST00000531727 SLC15A3Q8IY34 581 aa14.3□□□□□ -0.12
CPSF1-207ENST00000531727 RNF113BQ8IZP6 322 aaKnown RBP14.3□□□□□ -0.12
CPSF1-207ENST00000531727 OR13C2Q8NGS9 318 aa14.3□□□□□ -0.12
CPSF1-207ENST00000531727 RP9Q8TA86 221 aaKnown RBP14.3□□□□□ -0.12
CPSF1-207ENST00000531727 ABHD4Q8TB40 342 aa14.3□□□□□ -0.12
CPSF1-207ENST00000531727 RAB1CQ92928 201 aa14.3□□□□□ -0.12
CPSF1-207ENST00000531727 FAHD2AQ96GK7 314 aa14.3□□□□□ -0.12
CPSF1-207ENST00000531727 TIMD4Q96H15 378 aa14.3□□□□□ -0.12
CPSF1-207ENST00000531727 ELOVL3Q9HB03 270 aa14.3□□□□□ -0.12
CPSF1-207ENST00000531727 G6PC2Q9NQR9 355 aa14.3□□□□□ -0.12
CPSF1-207ENST00000531727 CYSLTR2Q9NS75 346 aa14.3□□□□□ -0.12
CPSF1-207ENST00000531727 CGGBP1Q9UFW8 167 aaPredicted RBP14.3□□□□□ -0.12
CPSF1-207ENST00000531727 A0A087WUU8 490 aa14.29□□□□□ -0.12
CPSF1-207ENST00000531727 ZSCAN5BA6NJL1 495 aa14.29□□□□□ -0.12
CPSF1-207ENST00000531727 C12orf71A8MTZ7 269 aa14.29□□□□□ -0.12
CPSF1-207ENST00000531727 CXCR6O00574 342 aa14.29□□□□□ -0.12
CPSF1-207ENST00000531727 MPZL1O95297 269 aa14.29□□□□□ -0.12
CPSF1-207ENST00000531727 ZNF682O95780 498 aa14.29□□□□□ -0.12
CPSF1-207ENST00000531727 ADH4P08319 380 aa14.29□□□□□ -0.12
CPSF1-207ENST00000531727 LIPAP38571 399 aa14.29□□□□□ -0.12
CPSF1-207ENST00000531727 IFI44LQ53G44 452 aa14.29□□□□□ -0.12
CPSF1-207ENST00000531727 ZNF774Q6NX45 483 aa14.29□□□□□ -0.12
CPSF1-207ENST00000531727 ZNF730Q6ZMV8 503 aa14.29□□□□□ -0.12
CPSF1-207ENST00000531727 MBOAT2Q6ZWT7 520 aa14.29□□□□□ -0.12
CPSF1-207ENST00000531727 TEX29Q8N6K0 151 aa14.29□□□□□ -0.12
CPSF1-207ENST00000531727 FAM156AQ8NDB6 213 aa14.29□□□□□ -0.12
CPSF1-207ENST00000531727 SEMA6DQ8NFY4 1073 aa14.29□□□□□ -0.12
CPSF1-207ENST00000531727 C4orf45Q96LM5 186 aa14.29□□□□□ -0.12
CPSF1-207ENST00000531727 EGLN1Q9GZT9 426 aa14.29□□□□□ -0.12
CPSF1-207ENST00000531727 CCDC134Q9H6E4 229 aa14.29□□□□□ -0.12
CPSF1-207ENST00000531727 POLE4Q9NR33 117 aa14.29□□□□□ -0.12
CPSF1-207ENST00000531727 TANC2Q9HCD6 1990 aa14.29□□□□□ -0.12
CPSF1-207ENST00000531727 H7C1C5 153 aa14.28□□□□□ -0.12
CPSF1-207ENST00000531727 CDC42EP2O14613 210 aa14.28□□□□□ -0.12
CPSF1-207ENST00000531727 PLPP2O43688 288 aa14.28□□□□□ -0.12
CPSF1-207ENST00000531727 PRSS23O95084 383 aa14.28□□□□□ -0.12
CPSF1-207ENST00000531727 NGFP01138 241 aa14.28□□□□□ -0.12
CPSF1-207ENST00000531727 SCG5P05408 212 aa14.28□□□□□ -0.12
CPSF1-207ENST00000531727 COX4I1P13073 169 aa14.28□□□□□ -0.12
CPSF1-207ENST00000531727 ARHGDIAP52565 204 aa14.28□□□□□ -0.12
CPSF1-207ENST00000531727 LCN6P62502 163 aa14.28□□□□□ -0.12
CPSF1-207ENST00000531727 GUCY1A3Q02108 690 aa14.28□□□□□ -0.12
CPSF1-207ENST00000531727 ARL9Q6T311 187 aa14.28□□□□□ -0.12
CPSF1-207ENST00000531727 THSD4Q6ZMP0 1018 aa14.28□□□□□ -0.12
CPSF1-207ENST00000531727 C1orf229Q6ZS94 237 aaPredicted RBP14.28□□□□□ -0.12
CPSF1-207ENST00000531727 CBLL1Q75N03 491 aa14.28□□□□□ -0.12
CPSF1-207ENST00000531727 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.28□□□□□ -0.12
CPSF1-207ENST00000531727 ZFAND2BQ8WV99 257 aa14.28□□□□□ -0.12
CPSF1-207ENST00000531727 CCL17Q92583 94 aa14.28□□□□□ -0.12
CPSF1-207ENST00000531727 HOPXQ9BPY8 73 aaPredicted RBP14.28□□□□□ -0.12
CPSF1-207ENST00000531727 WACQ9BTA9 647 aa14.28□□□□□ -0.12
CPSF1-207ENST00000531727 GRHPRQ9UBQ7 328 aa14.28□□□□□ -0.12
CPSF1-207ENST00000531727 KLHL21Q9UJP4 597 aa14.28□□□□□ -0.12
CPSF1-207ENST00000531727 ZDHHC8Q9ULC8 765 aa14.28□□□□□ -0.12
CPSF1-207ENST00000531727 NDRG4Q9ULP0 352 aaKnown RBP14.28□□□□□ -0.12
CPSF1-207ENST00000531727 ADAM18Q9Y3Q7 739 aa14.28□□□□□ -0.12
CPSF1-207ENST00000531727 A0A0G2JMP0 313 aa14.27□□□□□ -0.13
CPSF1-207ENST00000531727 A0A0X1KG70 313 aa14.27□□□□□ -0.13
CPSF1-207ENST00000531727 NME4O00746 187 aa14.27□□□□□ -0.13
CPSF1-207ENST00000531727 GSTA4O15217 222 aa14.27□□□□□ -0.13
CPSF1-207ENST00000531727 AHCYL1O43865 530 aa14.27□□□□□ -0.13
CPSF1-207ENST00000531727 UBOX5O94941 541 aa14.27□□□□□ -0.13
CPSF1-207ENST00000531727 AVPP01185 164 aa14.27□□□□□ -0.13
CPSF1-207ENST00000531727 CD14P08571 375 aa14.27□□□□□ -0.13
CPSF1-207ENST00000531727 COX5BP10606 129 aa14.27□□□□□ -0.13
CPSF1-207ENST00000531727 RPL4P36578 427 aaKnown RBP14.27□□□□□ -0.13
CPSF1-207ENST00000531727 GPR4P46093 362 aa14.27□□□□□ -0.13
CPSF1-207ENST00000531727 SLC7A2P52569 658 aa14.27□□□□□ -0.13
CPSF1-207ENST00000531727 SLC3A1Q07837 685 aa14.27□□□□□ -0.13
CPSF1-207ENST00000531727 ZBED5Q49AG3 693 aa14.27□□□□□ -0.13
CPSF1-207ENST00000531727 ZMAT1Q5H9K5 638 aa14.27□□□□□ -0.13
CPSF1-207ENST00000531727 C8orf82Q6P1X6 216 aaPredicted RBP14.27□□□□□ -0.13
CPSF1-207ENST00000531727 TBPL2Q6SJ96 375 aa14.27□□□□□ -0.13
CPSF1-207ENST00000531727 TMPRSS11FQ6ZWK6 438 aa14.27□□□□□ -0.13
CPSF1-207ENST00000531727 FKBP9P1Q75LS8 142 aa14.27□□□□□ -0.13
CPSF1-207ENST00000531727 FAM122BQ7Z309 247 aa14.27□□□□□ -0.13
CPSF1-207ENST00000531727 OR4M2Q8NGB6 313 aa14.27□□□□□ -0.13
CPSF1-207ENST00000531727 ZNF418Q8TF45 676 aaPredicted RBP14.27□□□□□ -0.13
CPSF1-207ENST00000531727 HSH2DQ96JZ2 352 aa14.27□□□□□ -0.13
CPSF1-207ENST00000531727 DIRC2Q96SL1 478 aa14.27□□□□□ -0.13
CPSF1-207ENST00000531727 TMPRSS13Q9BYE2 586 aa14.27□□□□□ -0.13
CPSF1-207ENST00000531727 ANKRD19PQ9H560 264 aa14.27□□□□□ -0.13
CPSF1-207ENST00000531727 LOC105371242A0A075B767 164 aa14.26□□□□□ -0.13
CPSF1-207ENST00000531727 XKRYO14609 159 aa14.26□□□□□ -0.13
CPSF1-207ENST00000531727 SERPINA1P01009 418 aa14.26□□□□□ -0.13
CPSF1-207ENST00000531727 CD55P08174 381 aa14.26□□□□□ -0.13
CPSF1-207ENST00000531727 ZNF26P17031 533 aaPredicted RBP14.26□□□□□ -0.13
CPSF1-207ENST00000531727 EPHA1P21709 976 aa14.26□□□□□ -0.13
CPSF1-207ENST00000531727 GSK3BP49841 420 aa14.26□□□□□ -0.13
CPSF1-207ENST00000531727 MESTQ5EB52 335 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms