RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-231ENST00000531110 TKTL2Q9H0I9 626 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 SYT4Q9H2B2 425 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 ADGRL4Q9HBW9 690 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 SLC25A19Q9HC21 320 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 MMP25Q9NPA2 562 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 ACOT13Q9NPJ3 140 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 HIF1ANQ9NWT6 349 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 MRPL15Q9P015 296 aaKnown RBP5.01□□□□□ -1.61
CD44-231ENST00000531110 IL17CQ9P0M4 197 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 C5AR2Q9P296 337 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 MARCH4Q9P2E8 410 aaPredicted RBP5.01□□□□□ -1.61
CD44-231ENST00000531110 IL36RNQ9UBH0 155 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 HACL1Q9UJ83 578 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 FBXL4Q9UKA2 621 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 IKZF3Q9UKT9 509 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 PADI1Q9ULC6 663 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 SAMD4AQ9UPU9 718 aaKnown RBP5.01□□□□□ -1.61
CD44-231ENST00000531110 B3GALT5Q9Y2C3 310 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 TBL2Q9Y4P3 447 aaKnown RBP5.01□□□□□ -1.61
CD44-231ENST00000531110 DOCK2Q92608 1830 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 KDM3BQ7LBC6 1761 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 DIP2CQ9Y2E4 1556 aa5□□□□□ -1.61
CD44-231ENST00000531110 C3P01024 1663 aa5□□□□□ -1.61
CD44-231ENST00000531110 DLG5Q8TDM6 1919 aa5□□□□□ -1.61
CD44-231ENST00000531110 TRAV30A0A087WSZ9 112 aa5□□□□□ -1.61
CD44-231ENST00000531110 KCNE1BA0A087WTH5 132 aa5□□□□□ -1.61
CD44-231ENST00000531110 TRAV25A0A0B4J276 109 aa5□□□□□ -1.61
CD44-231ENST00000531110 OR5H15A6NDH6 313 aa5□□□□□ -1.61
CD44-231ENST00000531110 OR5H1A6NKK0 313 aa5□□□□□ -1.61
CD44-231ENST00000531110 ZNF724A8MTY0 619 aa5□□□□□ -1.61
CD44-231ENST00000531110 M0R036 132 aa5□□□□□ -1.61
CD44-231ENST00000531110 FAAHO00519 579 aa5□□□□□ -1.61
CD44-231ENST00000531110 TNFRSF13BO14836 293 aaPredicted RBP5□□□□□ -1.61
CD44-231ENST00000531110 CASKO14936 926 aa5□□□□□ -1.61
CD44-231ENST00000531110 SCAMP2O15127 329 aaKnown RBP5□□□□□ -1.61
CD44-231ENST00000531110 ARPC3O15145 178 aa5□□□□□ -1.61
CD44-231ENST00000531110 PLA2G10O15496 165 aa5□□□□□ -1.61
CD44-231ENST00000531110 EMC8O43402 210 aa5□□□□□ -1.61
CD44-231ENST00000531110 STK16O75716 305 aa5□□□□□ -1.61
CD44-231ENST00000531110 ATP6AP2O75787 350 aa5□□□□□ -1.61
CD44-231ENST00000531110 VAMP5O95183 116 aa5□□□□□ -1.61
CD44-231ENST00000531110 CXCL14O95715 111 aa5□□□□□ -1.61
CD44-231ENST00000531110 PDYNP01213 254 aa5□□□□□ -1.61
CD44-231ENST00000531110 LCATP04180 440 aa5□□□□□ -1.61
CD44-231ENST00000531110 HNRNPA1P09651 372 aaKnown RBP eCLIP5□□□□□ -1.61
CD44-231ENST00000531110 UCHL1P09936 223 aa5□□□□□ -1.61
CD44-231ENST00000531110 OR10J4P0C629 311 aa5□□□□□ -1.61
CD44-231ENST00000531110 IL1RNP18510 177 aa5□□□□□ -1.61
CD44-231ENST00000531110 NFYAP23511 347 aaPredicted RBP5□□□□□ -1.61
CD44-231ENST00000531110 PSMA1P25786 263 aaKnown RBP5□□□□□ -1.61
CD44-231ENST00000531110 UCP1P25874 307 aa5□□□□□ -1.61
CD44-231ENST00000531110 TM4SF1P30408 202 aa5□□□□□ -1.61
CD44-231ENST00000531110 CEACAM3P40198 252 aa5□□□□□ -1.61
CD44-231ENST00000531110 ACLYP53396 1101 aa5□□□□□ -1.61
CD44-231ENST00000531110 NAPAP54920 295 aa5□□□□□ -1.61
CD44-231ENST00000531110 CDH12P55289 794 aa5□□□□□ -1.61
CD44-231ENST00000531110 TPI1P60174 286 aa5□□□□□ -1.61
CD44-231ENST00000531110 PITPNAQ00169 270 aa5□□□□□ -1.61
CD44-231ENST00000531110 ZNF616Q08AN1 781 aa5□□□□□ -1.61
CD44-231ENST00000531110 GPR18Q14330 331 aa5□□□□□ -1.61
CD44-231ENST00000531110 IRF3Q14653 427 aa5□□□□□ -1.61
CD44-231ENST00000531110 SURF2Q15527 256 aaPredicted RBP5□□□□□ -1.61
CD44-231ENST00000531110 ZNF79Q15937 498 aa5□□□□□ -1.61
CD44-231ENST00000531110 C18orf21Q32NC0 220 aaPredicted RBP5□□□□□ -1.61
CD44-231ENST00000531110 ODF3L2Q3SX64 289 aa5□□□□□ -1.61
CD44-231ENST00000531110 CARD16Q5EG05 197 aa5□□□□□ -1.61
CD44-231ENST00000531110 SDHAF4Q5VUM1 108 aa5□□□□□ -1.61
CD44-231ENST00000531110 TMEM236Q5W0B7 351 aa5□□□□□ -1.61
CD44-231ENST00000531110 OR2A2Q6IF42 318 aa5□□□□□ -1.61
CD44-231ENST00000531110 TRAT1Q6PIZ9 186 aa5□□□□□ -1.61
CD44-231ENST00000531110 LCLAT1Q6UWP7 414 aa5□□□□□ -1.61
CD44-231ENST00000531110 CES3Q6UWW8 571 aa5□□□□□ -1.61
CD44-231ENST00000531110 C17orf99Q6UX52 265 aa5□□□□□ -1.61
CD44-231ENST00000531110 DPPA4Q7L190 304 aa5□□□□□ -1.61
CD44-231ENST00000531110 CHMP1BQ7LBR1 199 aa5□□□□□ -1.61
CD44-231ENST00000531110 PRSS45Q7RTY3 260 aa5□□□□□ -1.61
CD44-231ENST00000531110 ZNF720Q7Z2F6 126 aa5□□□□□ -1.61
CD44-231ENST00000531110 AMZ2Q86W34 360 aa5□□□□□ -1.61
CD44-231ENST00000531110 TRAPPC5Q8IUR0 188 aa5□□□□□ -1.61
CD44-231ENST00000531110 SLC30A8Q8IWU4 369 aa5□□□□□ -1.61
CD44-231ENST00000531110 ZC3H3Q8IXZ2 948 aaKnown RBP5□□□□□ -1.61
CD44-231ENST00000531110 CPXM2Q8N436 756 aa5□□□□□ -1.61
CD44-231ENST00000531110 TMEM156Q8N614 296 aa5□□□□□ -1.61
CD44-231ENST00000531110 AMER3Q8N944 861 aa5□□□□□ -1.61
CD44-231ENST00000531110 OR4E2Q8NGC2 313 aa5□□□□□ -1.61
CD44-231ENST00000531110 OR4K14Q8NGD5 310 aa5□□□□□ -1.61
CD44-231ENST00000531110 OR9Q2Q8NGE9 314 aa5□□□□□ -1.61
CD44-231ENST00000531110 OR14L1PQ8NHC6 308 aa5□□□□□ -1.61
CD44-231ENST00000531110 ZCCHC10Q8TBK6 192 aa5□□□□□ -1.61
CD44-231ENST00000531110 RDH11Q8TC12 318 aa5□□□□□ -1.61
CD44-231ENST00000531110 GPX8Q8TED1 209 aa5□□□□□ -1.61
CD44-231ENST00000531110 RAD54LQ92698 747 aa5□□□□□ -1.61
CD44-231ENST00000531110 DNASE1L2Q92874 299 aa5□□□□□ -1.61
CD44-231ENST00000531110 HIST1H2BAQ96A08 127 aa5□□□□□ -1.61
CD44-231ENST00000531110 SFRP2Q96HF1 295 aa5□□□□□ -1.61
CD44-231ENST00000531110 MUS81Q96NY9 551 aa5□□□□□ -1.61
CD44-231ENST00000531110 PCDHB18PQ96TA0 734 aa5□□□□□ -1.61
CD44-231ENST00000531110 VPS25Q9BRG1 176 aa5□□□□□ -1.61
CD44-231ENST00000531110 ALKBH7Q9BT30 221 aaPredicted RBP5□□□□□ -1.61
CD44-231ENST00000531110 MED10Q9BTT4 135 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms