RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 PCBD1P61457 104 aa13.41□□□□□ -0.26
CPSF1-205ENST00000531042 PPP1CBP62140 327 aa13.41□□□□□ -0.26
CPSF1-205ENST00000531042 LIPEQ05469 1076 aa13.41□□□□□ -0.26
CPSF1-205ENST00000531042 ENDOGQ14249 297 aaKnown RBP13.41□□□□□ -0.26
CPSF1-205ENST00000531042 ZNF774Q6NX45 483 aa13.41□□□□□ -0.26
CPSF1-205ENST00000531042 FAHD2BQ6P2I3 314 aaPredicted RBP13.41□□□□□ -0.26
CPSF1-205ENST00000531042 RFPL4BQ6ZWI9 263 aa13.41□□□□□ -0.26
CPSF1-205ENST00000531042 SYT9Q86SS6 491 aa13.41□□□□□ -0.26
CPSF1-205ENST00000531042 RP9Q8TA86 221 aaKnown RBP13.41□□□□□ -0.26
CPSF1-205ENST00000531042 ABHD4Q8TB40 342 aa13.41□□□□□ -0.26
CPSF1-205ENST00000531042 GEMIN6Q8WXD5 167 aaKnown RBP13.41□□□□□ -0.26
CPSF1-205ENST00000531042 ACOT11Q8WXI4 607 aaPredicted RBP13.41□□□□□ -0.26
CPSF1-205ENST00000531042 RAB39BQ96DA2 213 aa13.41□□□□□ -0.26
CPSF1-205ENST00000531042 ELMOD3Q96FG2 381 aa13.41□□□□□ -0.26
CPSF1-205ENST00000531042 FAHD2AQ96GK7 314 aa13.41□□□□□ -0.26
CPSF1-205ENST00000531042 KLHL21Q9UJP4 597 aa13.41□□□□□ -0.26
CPSF1-205ENST00000531042 A0A087WUU8 490 aa13.4□□□□□ -0.26
CPSF1-205ENST00000531042 ZSCAN5BA6NJL1 495 aa13.4□□□□□ -0.26
CPSF1-205ENST00000531042 H3BSA7 217 aa13.4□□□□□ -0.26
CPSF1-205ENST00000531042 CXCR6O00574 342 aa13.4□□□□□ -0.26
CPSF1-205ENST00000531042 PLPP2O43688 288 aa13.4□□□□□ -0.26
CPSF1-205ENST00000531042 PRSS23O95084 383 aa13.4□□□□□ -0.26
CPSF1-205ENST00000531042 VENTXO95231 258 aa13.4□□□□□ -0.26
CPSF1-205ENST00000531042 MPZL1O95297 269 aa13.4□□□□□ -0.26
CPSF1-205ENST00000531042 ZNF682O95780 498 aa13.4□□□□□ -0.26
CPSF1-205ENST00000531042 AVPP01185 164 aa13.4□□□□□ -0.26
CPSF1-205ENST00000531042 IGHV2-5P01817 119 aa13.4□□□□□ -0.26
CPSF1-205ENST00000531042 SCG5P05408 212 aa13.4□□□□□ -0.26
CPSF1-205ENST00000531042 ADH4P08319 380 aa13.4□□□□□ -0.26
CPSF1-205ENST00000531042 MSR1P21757 451 aa13.4□□□□□ -0.26
CPSF1-205ENST00000531042 LIPAP38571 399 aa13.4□□□□□ -0.26
CPSF1-205ENST00000531042 GUCY1A3Q02108 690 aa13.4□□□□□ -0.26
CPSF1-205ENST00000531042 SCGB2A2Q13296 93 aa13.4□□□□□ -0.26
CPSF1-205ENST00000531042 IFI44LQ53G44 452 aa13.4□□□□□ -0.26
CPSF1-205ENST00000531042 SHQ1Q6PI26 577 aaKnown RBP13.4□□□□□ -0.26
CPSF1-205ENST00000531042 TBPL2Q6SJ96 375 aa13.4□□□□□ -0.26
CPSF1-205ENST00000531042 ZNF730Q6ZMV8 503 aa13.4□□□□□ -0.26
CPSF1-205ENST00000531042 C1orf229Q6ZS94 237 aaPredicted RBP13.4□□□□□ -0.26
CPSF1-205ENST00000531042 MBOAT2Q6ZWT7 520 aa13.4□□□□□ -0.26
CPSF1-205ENST00000531042 CBLL1Q75N03 491 aa13.4□□□□□ -0.26
CPSF1-205ENST00000531042 OR13C2Q8NGS9 318 aa13.4□□□□□ -0.26
CPSF1-205ENST00000531042 RAB1CQ92928 201 aa13.4□□□□□ -0.26
CPSF1-205ENST00000531042 TIMD4Q96H15 378 aa13.4□□□□□ -0.26
CPSF1-205ENST00000531042 C4orf45Q96LM5 186 aa13.4□□□□□ -0.26
CPSF1-205ENST00000531042 CCDC134Q9H6E4 229 aa13.4□□□□□ -0.26
CPSF1-205ENST00000531042 ELOVL3Q9HB03 270 aa13.4□□□□□ -0.26
CPSF1-205ENST00000531042 POLE4Q9NR33 117 aa13.4□□□□□ -0.26
CPSF1-205ENST00000531042 CYSLTR2Q9NS75 346 aa13.4□□□□□ -0.26
CPSF1-205ENST00000531042 TENM1Q9UKZ4 2725 aa13.4□□□□□ -0.27
CPSF1-205ENST00000531042 TANC2Q9HCD6 1990 aa13.4□□□□□ -0.27
CPSF1-205ENST00000531042 C12orf71A8MTZ7 269 aa13.39□□□□□ -0.27
CPSF1-205ENST00000531042 H7C1C5 153 aa13.39□□□□□ -0.27
CPSF1-205ENST00000531042 NME4O00746 187 aa13.39□□□□□ -0.27
CPSF1-205ENST00000531042 CDC42EP2O14613 210 aa13.39□□□□□ -0.27
CPSF1-205ENST00000531042 UBOX5O94941 541 aa13.39□□□□□ -0.27
CPSF1-205ENST00000531042 COX4I1P13073 169 aa13.39□□□□□ -0.27
CPSF1-205ENST00000531042 RPL4P36578 427 aaKnown RBP13.39□□□□□ -0.27
CPSF1-205ENST00000531042 ARHGDIAP52565 204 aa13.39□□□□□ -0.27
CPSF1-205ENST00000531042 LCN6P62502 163 aa13.39□□□□□ -0.27
CPSF1-205ENST00000531042 THSD4Q6ZMP0 1018 aa13.39□□□□□ -0.27
CPSF1-205ENST00000531042 TMPRSS11FQ6ZWK6 438 aa13.39□□□□□ -0.27
CPSF1-205ENST00000531042 FKBP9P1Q75LS8 142 aa13.39□□□□□ -0.27
CPSF1-205ENST00000531042 TEX29Q8N6K0 151 aa13.39□□□□□ -0.27
CPSF1-205ENST00000531042 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.39□□□□□ -0.27
CPSF1-205ENST00000531042 FAM156AQ8NDB6 213 aa13.39□□□□□ -0.27
CPSF1-205ENST00000531042 SEMA6DQ8NFY4 1073 aa13.39□□□□□ -0.27
CPSF1-205ENST00000531042 CCL17Q92583 94 aa13.39□□□□□ -0.27
CPSF1-205ENST00000531042 HOPXQ9BPY8 73 aaPredicted RBP13.39□□□□□ -0.27
CPSF1-205ENST00000531042 WACQ9BTA9 647 aa13.39□□□□□ -0.27
CPSF1-205ENST00000531042 EGLN1Q9GZT9 426 aa13.39□□□□□ -0.27
CPSF1-205ENST00000531042 GRHPRQ9UBQ7 328 aa13.39□□□□□ -0.27
CPSF1-205ENST00000531042 CGGBP1Q9UFW8 167 aaPredicted RBP13.39□□□□□ -0.27
CPSF1-205ENST00000531042 ZDHHC8Q9ULC8 765 aa13.39□□□□□ -0.27
CPSF1-205ENST00000531042 ADAM18Q9Y3Q7 739 aa13.39□□□□□ -0.27
CPSF1-205ENST00000531042 GSTA4O15217 222 aa13.38□□□□□ -0.27
CPSF1-205ENST00000531042 SERPINA1P01009 418 aa13.38□□□□□ -0.27
CPSF1-205ENST00000531042 CD14P08571 375 aa13.38□□□□□ -0.27
CPSF1-205ENST00000531042 COX5BP10606 129 aa13.38□□□□□ -0.27
CPSF1-205ENST00000531042 ZNF26P17031 533 aaPredicted RBP13.38□□□□□ -0.27
CPSF1-205ENST00000531042 GPR4P46093 362 aa13.38□□□□□ -0.27
CPSF1-205ENST00000531042 SLC7A2P52569 658 aa13.38□□□□□ -0.27
CPSF1-205ENST00000531042 ZBED5Q49AG3 693 aa13.38□□□□□ -0.27
CPSF1-205ENST00000531042 MESTQ5EB52 335 aa13.38□□□□□ -0.27
CPSF1-205ENST00000531042 C8orf82Q6P1X6 216 aaPredicted RBP13.38□□□□□ -0.27
CPSF1-205ENST00000531042 ARL9Q6T311 187 aa13.38□□□□□ -0.27
CPSF1-205ENST00000531042 ZFAND2BQ8WV99 257 aa13.38□□□□□ -0.27
CPSF1-205ENST00000531042 HSH2DQ96JZ2 352 aa13.38□□□□□ -0.27
CPSF1-205ENST00000531042 Q96M85 177 aa13.38□□□□□ -0.27
CPSF1-205ENST00000531042 DIRC2Q96SL1 478 aa13.38□□□□□ -0.27
CPSF1-205ENST00000531042 TMPRSS13Q9BYE2 586 aa13.38□□□□□ -0.27
CPSF1-205ENST00000531042 EMC7Q9NPA0 242 aa13.38□□□□□ -0.27
CPSF1-205ENST00000531042 ZNF446Q9NWS9 450 aa13.38□□□□□ -0.27
CPSF1-205ENST00000531042 NDRG4Q9ULP0 352 aaKnown RBP13.38□□□□□ -0.27
CPSF1-205ENST00000531042 LOC105371242A0A075B767 164 aa13.37□□□□□ -0.27
CPSF1-205ENST00000531042 A0A0G2JMP0 313 aa13.37□□□□□ -0.27
CPSF1-205ENST00000531042 A0A0X1KG70 313 aa13.37□□□□□ -0.27
CPSF1-205ENST00000531042 XKRYO14609 159 aa13.37□□□□□ -0.27
CPSF1-205ENST00000531042 AHCYL1O43865 530 aa13.37□□□□□ -0.27
CPSF1-205ENST00000531042 CD55P08174 381 aa13.37□□□□□ -0.27
CPSF1-205ENST00000531042 GSK3BP49841 420 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms