RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 C19orf57Q0VDD7 668 aa15.42■□□□□ 0.06
BRCA2-204ENST00000530893 C16orf47Q6ZP98 133 aaPredicted RBP15.42■□□□□ 0.06
BRCA2-204ENST00000530893 MEIOBQ8N635 442 aa15.42■□□□□ 0.06
BRCA2-204ENST00000530893 OR8H1Q8NGG4 311 aa15.42■□□□□ 0.06
BRCA2-204ENST00000530893 OR6M1Q8NGM8 313 aa15.42■□□□□ 0.06
BRCA2-204ENST00000530893 ST7LQ8TDW4 575 aa15.42■□□□□ 0.06
BRCA2-204ENST00000530893 HLA-CQ95604 372 aa15.42■□□□□ 0.06
BRCA2-204ENST00000530893 ATXN7L1Q9ULK2 861 aaPredicted RBP15.42■□□□□ 0.06
BRCA2-204ENST00000530893 ADAMTS9Q9P2N4 1935 aa15.42■□□□□ 0.06
BRCA2-204ENST00000530893 A0A0A6YYH2 397 aa15.41■□□□□ 0.06
BRCA2-204ENST00000530893 A0A1W2PNV4 684 aa15.41■□□□□ 0.06
BRCA2-204ENST00000530893 A0A1W2PPC1 479 aa15.41■□□□□ 0.06
BRCA2-204ENST00000530893 A6NJ64 397 aa15.41■□□□□ 0.06
BRCA2-204ENST00000530893 TMEM200CA6NKL6 621 aa15.41■□□□□ 0.06
BRCA2-204ENST00000530893 HTR2CP28335 458 aa15.41■□□□□ 0.06
BRCA2-204ENST00000530893 PRSS3P35030 304 aa15.41■□□□□ 0.06
BRCA2-204ENST00000530893 ZNF41P51814 821 aaPredicted RBP15.41■□□□□ 0.06
BRCA2-204ENST00000530893 PLA2G7Q13093 441 aa15.41■□□□□ 0.06
BRCA2-204ENST00000530893 TMEM244Q5VVB8 128 aa15.41■□□□□ 0.06
BRCA2-204ENST00000530893 ZNF626Q68DY1 528 aa15.41■□□□□ 0.06
BRCA2-204ENST00000530893 OR2T35Q8NGX2 323 aa15.41■□□□□ 0.06
BRCA2-204ENST00000530893 SLC25A28Q96A46 364 aa15.41■□□□□ 0.06
BRCA2-204ENST00000530893 WDR77Q9BQA1 342 aaPredicted RBP15.41■□□□□ 0.06
BRCA2-204ENST00000530893 METTL17Q9H7H0 456 aaPredicted RBP15.41■□□□□ 0.06
BRCA2-204ENST00000530893 MED11Q9P086 117 aa15.41■□□□□ 0.06
BRCA2-204ENST00000530893 PCDHGA5Q9Y5G8 931 aa15.41■□□□□ 0.06
BRCA2-204ENST00000530893 USP34Q70CQ2 3546 aa15.41■□□□□ 0.06
BRCA2-204ENST00000530893 LIPT2A6NK58 231 aa15.41■□□□□ 0.06
BRCA2-204ENST00000530893 H3BSH0 61 aa15.41■□□□□ 0.06
BRCA2-204ENST00000530893 ZFAND5O76080 213 aa15.41■□□□□ 0.06
BRCA2-204ENST00000530893 GIPP09681 153 aaPredicted RBP15.41■□□□□ 0.06
BRCA2-204ENST00000530893 UBCP0CG48 685 aaKnown RBP15.41■□□□□ 0.06
BRCA2-204ENST00000530893 FOSL2P15408 326 aa15.41■□□□□ 0.06
BRCA2-204ENST00000530893 RAD52P43351 418 aa15.41■□□□□ 0.06
BRCA2-204ENST00000530893 EFNB2P52799 333 aa15.41■□□□□ 0.06
BRCA2-204ENST00000530893 ACTBP60709 375 aa15.41■□□□□ 0.06
BRCA2-204ENST00000530893 GPR85P60893 370 aa15.41■□□□□ 0.06
BRCA2-204ENST00000530893 ACTG1P63261 375 aa15.41■□□□□ 0.06
BRCA2-204ENST00000530893 POU3F1Q03052 451 aaPredicted RBP15.41■□□□□ 0.06
BRCA2-204ENST00000530893 FOXF1Q12946 379 aa15.41■□□□□ 0.06
BRCA2-204ENST00000530893 OTPQ5XKR4 325 aa15.41■□□□□ 0.06
BRCA2-204ENST00000530893 Q6ZTK2 550 aa15.41■□□□□ 0.06
BRCA2-204ENST00000530893 NLRC3Q7RTR2 1065 aa15.41■□□□□ 0.06
BRCA2-204ENST00000530893 DCXRQ7Z4W1 244 aa15.41■□□□□ 0.06
BRCA2-204ENST00000530893 CPEB2Q7Z5Q1 589 aaKnown RBP15.41■□□□□ 0.06
BRCA2-204ENST00000530893 KDM8Q8N371 416 aa15.41■□□□□ 0.06
BRCA2-204ENST00000530893 NKAIN3Q8N8D7 197 aa15.41■□□□□ 0.06
BRCA2-204ENST00000530893 THAP3Q8WTV1 239 aaPredicted RBP15.41■□□□□ 0.06
BRCA2-204ENST00000530893 PTX4Q96A99 478 aa15.41■□□□□ 0.06
BRCA2-204ENST00000530893 SLC25A44Q96H78 314 aaPredicted RBP15.41■□□□□ 0.06
BRCA2-204ENST00000530893 SORCS2Q96PQ0 1159 aa15.41■□□□□ 0.06
BRCA2-204ENST00000530893 CMKLR1Q99788 373 aa15.41■□□□□ 0.06
BRCA2-204ENST00000530893 G6PC2Q9NQR9 355 aa15.41■□□□□ 0.06
BRCA2-204ENST00000530893 KLRF1Q9NZS2 232 aa15.41■□□□□ 0.06
BRCA2-204ENST00000530893 PPP4R1LQ9P1A2 415 aa15.41■□□□□ 0.06
BRCA2-204ENST00000530893 C19orf25Q9UFG5 118 aaPredicted RBP15.41■□□□□ 0.06
BRCA2-204ENST00000530893 VDAC3Q9Y277 283 aa15.41■□□□□ 0.06
BRCA2-204ENST00000530893 RPH3AQ9Y2J0 694 aaPredicted RBP15.41■□□□□ 0.06
BRCA2-204ENST00000530893 EMC9Q9Y3B6 208 aa15.41■□□□□ 0.06
BRCA2-204ENST00000530893 CABIN1Q9Y6J0 2220 aa15.41■□□□□ 0.06
BRCA2-204ENST00000530893 FREM3P0C091 2139 aa15.4■□□□□ 0.06
BRCA2-204ENST00000530893 TRAV18A0A075B6X5 111 aa15.4■□□□□ 0.06
BRCA2-204ENST00000530893 TMEM272A0A1B0GTI8 110 aa15.4■□□□□ 0.06
BRCA2-204ENST00000530893 TSC22D2O75157 780 aa15.4■□□□□ 0.06
BRCA2-204ENST00000530893 MPZL1O95297 269 aa15.4■□□□□ 0.06
BRCA2-204ENST00000530893 TIAF1O95411 115 aa15.4■□□□□ 0.06
BRCA2-204ENST00000530893 AKAIN1P0CW23 69 aa15.4■□□□□ 0.06
BRCA2-204ENST00000530893 C4BPBP20851 252 aa15.4■□□□□ 0.06
BRCA2-204ENST00000530893 SELENOPP49908 381 aa15.4■□□□□ 0.06
BRCA2-204ENST00000530893 MMP16P51512 607 aa15.4■□□□□ 0.06
BRCA2-204ENST00000530893 FOXL2P58012 376 aa15.4■□□□□ 0.06
BRCA2-204ENST00000530893 ZNF385CQ66K41 422 aaPredicted RBP15.4■□□□□ 0.06
BRCA2-204ENST00000530893 ARSKQ6UWY0 536 aa15.4■□□□□ 0.06
BRCA2-204ENST00000530893 PLPP7Q8NBV4 271 aa15.4■□□□□ 0.06
BRCA2-204ENST00000530893 ADPRHL1Q8NDY3 354 aa15.4■□□□□ 0.06
BRCA2-204ENST00000530893 OR4C16Q8NGL9 310 aa15.4■□□□□ 0.06
BRCA2-204ENST00000530893 OR6N1Q8NGY5 312 aa15.4■□□□□ 0.06
BRCA2-204ENST00000530893 FOXRED1Q96CU9 486 aaPredicted RBP15.4■□□□□ 0.06
BRCA2-204ENST00000530893 C5orf34Q96MH7 638 aa15.4■□□□□ 0.06
BRCA2-204ENST00000530893 SLC26A1Q9H2B4 701 aa15.4■□□□□ 0.06
BRCA2-204ENST00000530893 SERINC1Q9NRX5 453 aa15.4■□□□□ 0.06
BRCA2-204ENST00000530893 OR52A1Q9UKL2 312 aa15.4■□□□□ 0.06
BRCA2-204ENST00000530893 CACNA1CQ13936 2221 aa15.4■□□□□ 0.06
BRCA2-204ENST00000530893 A0A0C4DFX4 3053 aa15.4■□□□□ 0.06
BRCA2-204ENST00000530893 A0A1W2PQ72 361 aa15.39■□□□□ 0.05
BRCA2-204ENST00000530893 LOC390937A0A1W2PQ73 354 aa15.39■□□□□ 0.05
BRCA2-204ENST00000530893 C2orf72A6NCS6 295 aa15.39■□□□□ 0.05
BRCA2-204ENST00000530893 GABRA1P14867 456 aa15.39■□□□□ 0.05
BRCA2-204ENST00000530893 DNASE1L1P49184 302 aa15.39■□□□□ 0.05
BRCA2-204ENST00000530893 RGS19P49795 217 aa15.39■□□□□ 0.05
BRCA2-204ENST00000530893 LGALSLQ3ZCW2 172 aaPredicted RBP15.39■□□□□ 0.05
BRCA2-204ENST00000530893 LYSMD4Q5XG99 296 aa15.39■□□□□ 0.05
BRCA2-204ENST00000530893 FAAP20Q6NZ36 180 aa15.39■□□□□ 0.05
BRCA2-204ENST00000530893 GUSBP11Q6P575 273 aa15.39■□□□□ 0.05
BRCA2-204ENST00000530893 TMEM205Q6UW68 189 aa15.39■□□□□ 0.05
BRCA2-204ENST00000530893 MDGA2Q7Z553 956 aa15.39■□□□□ 0.05
BRCA2-204ENST00000530893 ZNF680Q8NEM1 530 aa15.39■□□□□ 0.05
BRCA2-204ENST00000530893 OR13C3Q8NGS6 347 aa15.39■□□□□ 0.05
BRCA2-204ENST00000530893 RNF133Q8WVZ7 376 aa15.39■□□□□ 0.05
BRCA2-204ENST00000530893 PIGKQ92643 395 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms