RNA–Protein interactions for RNA: ENST00000530120.5

CSRP1-213, Transcript of cysteine and glycine rich protein 1, human

TSL 4

Gene CSRP1, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSRP1-213	ENST00000530120	POLR2J2	Q9GZM3	115 aa	Known RBP	10.29	□□□□□ -0.76
CSRP1-213	ENST00000530120	POLR2J3	Q9H1A7	115 aa	Known RBP	10.29	□□□□□ -0.76
CSRP1-213	ENST00000530120	GLTP	Q9NZD2	209 aa		10.29	□□□□□ -0.76
CSRP1-213	ENST00000530120	PCDHB10	Q9UN67	800 aa		10.29	□□□□□ -0.76
CSRP1-213	ENST00000530120	SH3PXD2B	A1X283	911 aa		10.28	□□□□□ -0.76
CSRP1-213	ENST00000530120		M0R3H8	397 aa		10.28	□□□□□ -0.76
CSRP1-213	ENST00000530120	RNF13	O43567	381 aa		10.28	□□□□□ -0.76
CSRP1-213	ENST00000530120	IGHG1	P01857	330 aa		10.28	□□□□□ -0.76
CSRP1-213	ENST00000530120	HIST1H2AB	P04908	130 aa		10.28	□□□□□ -0.76
CSRP1-213	ENST00000530120	IGFBP1	P08833	259 aa	Predicted RBP	10.28	□□□□□ -0.76
CSRP1-213	ENST00000530120	CD247	P20963	164 aa		10.28	□□□□□ -0.76
CSRP1-213	ENST00000530120	IL2RG	P31785	369 aa		10.28	□□□□□ -0.76
CSRP1-213	ENST00000530120	GPR6	P46095	362 aa	Predicted RBP	10.28	□□□□□ -0.76
CSRP1-213	ENST00000530120	TMEM33	P57088	247 aa		10.28	□□□□□ -0.76
CSRP1-213	ENST00000530120	TOP3A	Q13472	1001 aa	Predicted RBP	10.28	□□□□□ -0.76
CSRP1-213	ENST00000530120	RFX4	Q33E94	735 aa		10.28	□□□□□ -0.76
CSRP1-213	ENST00000530120	C11orf91	Q3C1V1	193 aa		10.28	□□□□□ -0.76
CSRP1-213	ENST00000530120	PCGF3	Q3KNV8	242 aa		10.28	□□□□□ -0.76
CSRP1-213	ENST00000530120	SLC36A2	Q495M3	483 aa		10.28	□□□□□ -0.76
CSRP1-213	ENST00000530120	CYBRD1	Q53TN4	286 aa		10.28	□□□□□ -0.76
CSRP1-213	ENST00000530120	FAM209A	Q5JX71	171 aa		10.28	□□□□□ -0.76
CSRP1-213	ENST00000530120	ENTPD8	Q5MY95	495 aa		10.28	□□□□□ -0.76
CSRP1-213	ENST00000530120	TMEM53	Q6P2H8	277 aa		10.28	□□□□□ -0.76
CSRP1-213	ENST00000530120	ERICH5	Q6P6B1	374 aa		10.28	□□□□□ -0.76
CSRP1-213	ENST00000530120	DEF8	Q6ZN54	512 aa		10.28	□□□□□ -0.76
CSRP1-213	ENST00000530120	HIST3H2A	Q7L7L0	130 aa		10.28	□□□□□ -0.76
CSRP1-213	ENST00000530120	NANOGNB	Q7Z5D8	188 aa		10.28	□□□□□ -0.76
CSRP1-213	ENST00000530120	PEG10	Q86TG7	708 aa	Known RBP	10.28	□□□□□ -0.76
CSRP1-213	ENST00000530120	SMYD1	Q8NB12	490 aa		10.28	□□□□□ -0.76
CSRP1-213	ENST00000530120	OR6T1	Q8NGN1	323 aa		10.28	□□□□□ -0.76
CSRP1-213	ENST00000530120	OR1J2	Q8NGS2	313 aa		10.28	□□□□□ -0.76
CSRP1-213	ENST00000530120	ZNF420	Q8TAQ5	688 aa	Predicted RBP	10.28	□□□□□ -0.76
CSRP1-213	ENST00000530120	HIST1H2AC	Q93077	130 aa		10.28	□□□□□ -0.76
CSRP1-213	ENST00000530120	MS4A3	Q96HJ5	214 aa		10.28	□□□□□ -0.76
CSRP1-213	ENST00000530120	TXNDC15	Q96J42	360 aa		10.28	□□□□□ -0.76
CSRP1-213	ENST00000530120	OSBPL10	Q9BXB5	764 aa		10.28	□□□□□ -0.76
CSRP1-213	ENST00000530120	TPK1	Q9H3S4	243 aa		10.28	□□□□□ -0.76
CSRP1-213	ENST00000530120	KAT8	Q9H7Z6	458 aa	Known RBP	10.28	□□□□□ -0.76
CSRP1-213	ENST00000530120	TMEM38B	Q9NVV0	291 aa		10.28	□□□□□ -0.76
CSRP1-213	ENST00000530120		A0A1W2PPW3	197 aa		10.27	□□□□□ -0.77
CSRP1-213	ENST00000530120	NPIPB13	A6NJU9	1138 aa		10.27	□□□□□ -0.77
CSRP1-213	ENST00000530120	CPSF4L	A6NMK7	179 aa	Known RBP	10.27	□□□□□ -0.77
CSRP1-213	ENST00000530120	NPIPB4	C9JG80	1138 aa		10.27	□□□□□ -0.77
CSRP1-213	ENST00000530120	C11orf98	E9PRG8	122 aa		10.27	□□□□□ -0.77
CSRP1-213	ENST00000530120	DHH	O43323	396 aa		10.27	□□□□□ -0.77
CSRP1-213	ENST00000530120	TRMU	O75648	421 aa	Known RBP	10.27	□□□□□ -0.77
CSRP1-213	ENST00000530120	SERPINI2	O75830	405 aa		10.27	□□□□□ -0.77
CSRP1-213	ENST00000530120	MT-ND5	P03915	603 aa		10.27	□□□□□ -0.77
CSRP1-213	ENST00000530120	ASAH2B	P0C7U1	165 aa		10.27	□□□□□ -0.77
CSRP1-213	ENST00000530120	PGA4	P0DJD7	388 aa		10.27	□□□□□ -0.77
CSRP1-213	ENST00000530120	PGA3	P0DJD8	388 aa		10.27	□□□□□ -0.77
CSRP1-213	ENST00000530120	SAG	P10523	405 aa	Predicted RBP	10.27	□□□□□ -0.77
CSRP1-213	ENST00000530120	RBM34	P42696	430 aa	Known RBP	10.27	□□□□□ -0.77
CSRP1-213	ENST00000530120	LIMS1	P48059	325 aa		10.27	□□□□□ -0.77
CSRP1-213	ENST00000530120	DAP3	P51398	398 aa	Known RBP	10.27	□□□□□ -0.77
CSRP1-213	ENST00000530120	RPS6KA3	P51812	740 aa		10.27	□□□□□ -0.77
CSRP1-213	ENST00000530120	KLF3	P57682	345 aa	Predicted RBP	10.27	□□□□□ -0.77
CSRP1-213	ENST00000530120	PIGF	Q07326	219 aa		10.27	□□□□□ -0.77
CSRP1-213	ENST00000530120	NPTX1	Q15818	432 aa		10.27	□□□□□ -0.77
CSRP1-213	ENST00000530120	MOG	Q16653	247 aa		10.27	□□□□□ -0.77
CSRP1-213	ENST00000530120	DUSP7	Q16829	419 aa		10.27	□□□□□ -0.77
CSRP1-213	ENST00000530120	ELFN2	Q5R3F8	820 aa		10.27	□□□□□ -0.77
CSRP1-213	ENST00000530120	RBM48	Q5RL73	367 aa	Known RBP	10.27	□□□□□ -0.77
CSRP1-213	ENST00000530120	RGS7BP	Q6MZT1	257 aa	Predicted RBP	10.27	□□□□□ -0.77
CSRP1-213	ENST00000530120	UNQ6126/PRO20091	Q6UXV3	157 aa		10.27	□□□□□ -0.77
CSRP1-213	ENST00000530120	ZDHHC13	Q8IUH4	622 aa		10.27	□□□□□ -0.77
CSRP1-213	ENST00000530120	C1orf174	Q8IYL3	243 aa		10.27	□□□□□ -0.77
CSRP1-213	ENST00000530120	ZCCHC24	Q8N2G6	241 aa	Known RBP	10.27	□□□□□ -0.77
CSRP1-213	ENST00000530120	SLC30A7	Q8NEW0	376 aa		10.27	□□□□□ -0.77
CSRP1-213	ENST00000530120	OR10A6	Q8NH74	314 aa		10.27	□□□□□ -0.77
CSRP1-213	ENST00000530120	OR5K1	Q8NHB7	308 aa		10.27	□□□□□ -0.77
CSRP1-213	ENST00000530120	SNX33	Q8WV41	574 aa		10.27	□□□□□ -0.77
CSRP1-213	ENST00000530120	RBM4B	Q9BQ04	359 aa	Known RBP	10.27	□□□□□ -0.77
CSRP1-213	ENST00000530120	BCL2L14	Q9BZR8	327 aa		10.27	□□□□□ -0.77
CSRP1-213	ENST00000530120	SMURF2	Q9HAU4	748 aa		10.27	□□□□□ -0.77
CSRP1-213	ENST00000530120	DCAF13	Q9NV06	445 aa	Known RBP	10.27	□□□□□ -0.77
CSRP1-213	ENST00000530120	SLCO1C1	Q9NYB5	712 aa		10.27	□□□□□ -0.77
CSRP1-213	ENST00000530120	NKIRAS2	Q9NYR9	191 aa		10.27	□□□□□ -0.77
CSRP1-213	ENST00000530120	TAS2R5	Q9NYW4	299 aa		10.27	□□□□□ -0.77
CSRP1-213	ENST00000530120	SLC7A7	Q9UM01	511 aa		10.27	□□□□□ -0.77
CSRP1-213	ENST00000530120	GRIP1	Q9Y3R0	1128 aa		10.27	□□□□□ -0.77
CSRP1-213	ENST00000530120	IGLV3-9	A0A075B6K5	115 aa		10.26	□□□□□ -0.77
CSRP1-213	ENST00000530120		A0A1W2PRG6	482 aa		10.26	□□□□□ -0.77
CSRP1-213	ENST00000530120	HTR3E	A5X5Y0	456 aa		10.26	□□□□□ -0.77
CSRP1-213	ENST00000530120	MCIDAS	D6RGH6	385 aa		10.26	□□□□□ -0.77
CSRP1-213	ENST00000530120	LRRN3	E7EW58	273 aa		10.26	□□□□□ -0.77
CSRP1-213	ENST00000530120		M0QX08	132 aa		10.26	□□□□□ -0.77
CSRP1-213	ENST00000530120	NOL3	O60936	208 aa	Known RBP	10.26	□□□□□ -0.77
CSRP1-213	ENST00000530120	CH25H	O95992	272 aa		10.26	□□□□□ -0.77
CSRP1-213	ENST00000530120	BCL10	O95999	233 aa		10.26	□□□□□ -0.77
CSRP1-213	ENST00000530120	OPN1SW	P03999	348 aa		10.26	□□□□□ -0.77
CSRP1-213	ENST00000530120	ALPL	P05186	524 aa		10.26	□□□□□ -0.77
CSRP1-213	ENST00000530120	ZNF250	P15622	560 aa		10.26	□□□□□ -0.77
CSRP1-213	ENST00000530120	JUNB	P17275	347 aa	Predicted RBP	10.26	□□□□□ -0.77
CSRP1-213	ENST00000530120	RAD52	P43351	418 aa		10.26	□□□□□ -0.77
CSRP1-213	ENST00000530120	ZNF84	P51523	738 aa		10.26	□□□□□ -0.77
CSRP1-213	ENST00000530120	HILS1	P60008	231 aa		10.26	□□□□□ -0.77
CSRP1-213	ENST00000530120	GABARAPL2	P60520	117 aa		10.26	□□□□□ -0.77
CSRP1-213	ENST00000530120	TEK	Q02763	1124 aa		10.26	□□□□□ -0.77
CSRP1-213	ENST00000530120	PLP2	Q04941	152 aa		10.26	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms