RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 SUB1P53999 127 aaKnown RBP eCLIP3.09□□□□□ -1.91
C11orf88-204ENST00000529661 KRTAP10-8P60410 259 aa3.09□□□□□ -1.91
C11orf88-204ENST00000529661 TPM4P67936 248 aa3.09□□□□□ -1.91
C11orf88-204ENST00000529661 PSG7Q13046 419 aa3.09□□□□□ -1.91
C11orf88-204ENST00000529661 GPR176Q14439 515 aa3.09□□□□□ -1.91
C11orf88-204ENST00000529661 LY6G6FQ5SQ64 297 aa3.09□□□□□ -1.91
C11orf88-204ENST00000529661 FRMPD2BQ6IN97 320 aa3.09□□□□□ -1.91
C11orf88-204ENST00000529661 TTC23LQ6PF05 361 aa3.09□□□□□ -1.91
C11orf88-204ENST00000529661 ACP7Q6ZNF0 438 aa3.09□□□□□ -1.91
C11orf88-204ENST00000529661 COX15Q7KZN9 410 aa3.09□□□□□ -1.91
C11orf88-204ENST00000529661 APRG1Q8IVJ8 170 aa3.09□□□□□ -1.91
C11orf88-204ENST00000529661 CMTM8Q8IZV2 173 aa3.09□□□□□ -1.91
C11orf88-204ENST00000529661 LIX1Q8N485 282 aa3.09□□□□□ -1.91
C11orf88-204ENST00000529661 TMEM104Q8NE00 496 aa3.09□□□□□ -1.91
C11orf88-204ENST00000529661 NPBQ8NG41 125 aa3.09□□□□□ -1.91
C11orf88-204ENST00000529661 OR4F15Q8NGB8 312 aa3.09□□□□□ -1.91
C11orf88-204ENST00000529661 OR4A15Q8NGL6 344 aa3.09□□□□□ -1.91
C11orf88-204ENST00000529661 OR2G3Q8NGZ4 309 aa3.09□□□□□ -1.91
C11orf88-204ENST00000529661 FANK1Q8TC84 345 aa3.09□□□□□ -1.91
C11orf88-204ENST00000529661 ANP32BQ92688 251 aaKnown RBP3.09□□□□□ -1.91
C11orf88-204ENST00000529661 KIFAP3Q92845 792 aa3.09□□□□□ -1.91
C11orf88-204ENST00000529661 MED8Q96G25 268 aa3.09□□□□□ -1.91
C11orf88-204ENST00000529661 CSPG4P5Q96PW8 444 aa3.09□□□□□ -1.91
C11orf88-204ENST00000529661 NRTNQ99748 197 aa3.09□□□□□ -1.91
C11orf88-204ENST00000529661 RAB1BQ9H0U4 201 aa3.09□□□□□ -1.91
C11orf88-204ENST00000529661 OR2AG1Q9H205 316 aa3.09□□□□□ -1.91
C11orf88-204ENST00000529661 UGT1A10Q9HAW8 530 aa3.09□□□□□ -1.91
C11orf88-204ENST00000529661 FGF20Q9NP95 211 aaPredicted RBP3.09□□□□□ -1.91
C11orf88-204ENST00000529661 UBAP1Q9NZ09 502 aa3.09□□□□□ -1.91
C11orf88-204ENST00000529661 A0A1W2PRD5 423 aa3.08□□□□□ -1.92
C11orf88-204ENST00000529661 TPM3P06753 285 aa3.08□□□□□ -1.92
C11orf88-204ENST00000529661 GKN3PP0CG01 181 aa3.08□□□□□ -1.92
C11orf88-204ENST00000529661 CRISP2P16562 243 aa3.08□□□□□ -1.92
C11orf88-204ENST00000529661 HOXB8P17481 243 aaPredicted RBP3.08□□□□□ -1.92
C11orf88-204ENST00000529661 FOXN2P32314 431 aa3.08□□□□□ -1.92
C11orf88-204ENST00000529661 NUDT1P36639 197 aa3.08□□□□□ -1.92
C11orf88-204ENST00000529661 CX3CR1P49238 355 aa3.08□□□□□ -1.92
C11orf88-204ENST00000529661 SSR4P51571 173 aa3.08□□□□□ -1.92
C11orf88-204ENST00000529661 PSMC5P62195 406 aa3.08□□□□□ -1.92
C11orf88-204ENST00000529661 ZNF92Q03936 586 aa3.08□□□□□ -1.92
C11orf88-204ENST00000529661 SELENBP1Q13228 472 aa3.08□□□□□ -1.92
C11orf88-204ENST00000529661 AQP6Q13520 282 aa3.08□□□□□ -1.92
C11orf88-204ENST00000529661 ANGPT1Q15389 498 aa3.08□□□□□ -1.92
C11orf88-204ENST00000529661 REEP3Q6NUK4 255 aa3.08□□□□□ -1.92
C11orf88-204ENST00000529661 ULK3Q6PHR2 472 aa3.08□□□□□ -1.92
C11orf88-204ENST00000529661 ASCL4Q6XD76 172 aa3.08□□□□□ -1.92
C11orf88-204ENST00000529661 PEX26Q7Z412 305 aa3.08□□□□□ -1.92
C11orf88-204ENST00000529661 SNX20Q7Z614 316 aa3.08□□□□□ -1.92
C11orf88-204ENST00000529661 RBM45Q8IUH3 476 aaKnown RBP3.08□□□□□ -1.92
C11orf88-204ENST00000529661 FAM86B1Q8N7N1 296 aa3.08□□□□□ -1.92
C11orf88-204ENST00000529661 FBXO36Q8NEA4 188 aa3.08□□□□□ -1.92
C11orf88-204ENST00000529661 LRRC58Q96CX6 371 aa3.08□□□□□ -1.92
C11orf88-204ENST00000529661 CCDC126Q96EE4 140 aa3.08□□□□□ -1.92
C11orf88-204ENST00000529661 XPO6Q96QU8 1125 aaKnown RBP3.08□□□□□ -1.92
C11orf88-204ENST00000529661 CYTH2Q99418 400 aa3.08□□□□□ -1.92
C11orf88-204ENST00000529661 SH3GL3Q99963 347 aa3.08□□□□□ -1.92
C11orf88-204ENST00000529661 HES7Q9BYE0 225 aa3.08□□□□□ -1.92
C11orf88-204ENST00000529661 NEUROG2Q9H2A3 272 aa3.08□□□□□ -1.92
C11orf88-204ENST00000529661 ZNF302Q9NR11 478 aa3.08□□□□□ -1.92
C11orf88-204ENST00000529661 NRBP2Q9NSY0 501 aa3.08□□□□□ -1.92
C11orf88-204ENST00000529661 IFNKQ9P0W0 207 aa3.08□□□□□ -1.92
C11orf88-204ENST00000529661 FLVCR2Q9UPI3 526 aa3.08□□□□□ -1.92
C11orf88-204ENST00000529661 TP53TG5Q9Y2B4 290 aa3.08□□□□□ -1.92
C11orf88-204ENST00000529661 MYO3BQ8WXR4 1341 aa3.08□□□□□ -1.92
C11orf88-204ENST00000529661 TRAV6A0A075B6T7 132 aa3.07□□□□□ -1.92
C11orf88-204ENST00000529661 A0A1B0GVI7 797 aa3.07□□□□□ -1.92
C11orf88-204ENST00000529661 TMEM120BA0PK00 339 aa3.07□□□□□ -1.92
C11orf88-204ENST00000529661 LRRIQ3A6PVS8 624 aaPredicted RBP3.07□□□□□ -1.92
C11orf88-204ENST00000529661 PANO1I0J062 215 aa3.07□□□□□ -1.92
C11orf88-204ENST00000529661 M0R3G1 203 aa3.07□□□□□ -1.92
C11orf88-204ENST00000529661 AIM2O14862 343 aa3.07□□□□□ -1.92
C11orf88-204ENST00000529661 RTL8CO15255 209 aa3.07□□□□□ -1.92
C11orf88-204ENST00000529661 NIPSNAP2O75323 286 aa3.07□□□□□ -1.92
C11orf88-204ENST00000529661 CDK14O94921 469 aa3.07□□□□□ -1.92
C11orf88-204ENST00000529661 CLIC3O95833 236 aa3.07□□□□□ -1.92
C11orf88-204ENST00000529661 MOSP00540 346 aa3.07□□□□□ -1.92
C11orf88-204ENST00000529661 IGHV4-34P06331 123 aa3.07□□□□□ -1.92
C11orf88-204ENST00000529661 BCKDHBP21953 392 aa3.07□□□□□ -1.92
C11orf88-204ENST00000529661 CCNE1P24864 410 aa3.07□□□□□ -1.92
C11orf88-204ENST00000529661 DCKP27707 260 aa3.07□□□□□ -1.92
C11orf88-204ENST00000529661 SLC1A1P43005 524 aa3.07□□□□□ -1.92
C11orf88-204ENST00000529661 TMED10P49755 219 aaKnown RBP3.07□□□□□ -1.92
C11orf88-204ENST00000529661 WNT4P56705 351 aa3.07□□□□□ -1.92
C11orf88-204ENST00000529661 RPS21P63220 83 aaKnown RBP3.07□□□□□ -1.92
C11orf88-204ENST00000529661 UBE2IP63279 158 aaKnown RBP3.07□□□□□ -1.92
C11orf88-204ENST00000529661 TNNC1P63316 161 aa3.07□□□□□ -1.92
C11orf88-204ENST00000529661 CAPRIN1Q14444 709 aaKnown RBP3.07□□□□□ -1.92
C11orf88-204ENST00000529661 NCF4Q15080 339 aa3.07□□□□□ -1.92
C11orf88-204ENST00000529661 PSG3Q16557 428 aa3.07□□□□□ -1.92
C11orf88-204ENST00000529661 C18orf21Q32NC0 220 aaPredicted RBP3.07□□□□□ -1.92
C11orf88-204ENST00000529661 C2orf83Q53S99 150 aa3.07□□□□□ -1.92
C11orf88-204ENST00000529661 LRRC10Q5BKY1 277 aa3.07□□□□□ -1.92
C11orf88-204ENST00000529661 LCN12Q6JVE5 192 aa3.07□□□□□ -1.92
C11orf88-204ENST00000529661 NDUFAF7Q7L592 441 aa3.07□□□□□ -1.92
C11orf88-204ENST00000529661 IQCKQ8N0W5 287 aa3.07□□□□□ -1.92
C11orf88-204ENST00000529661 JAGN1Q8N5M9 183 aa3.07□□□□□ -1.92
C11orf88-204ENST00000529661 LRRC75AQ8NAA5 344 aa3.07□□□□□ -1.92
C11orf88-204ENST00000529661 LINC01555Q8NAE3 123 aa3.07□□□□□ -1.92
C11orf88-204ENST00000529661 INO80EQ8NBZ0 244 aaPredicted RBP3.07□□□□□ -1.92
C11orf88-204ENST00000529661 MCOLN3Q8TDD5 553 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms