RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 ZNF74Q16587 644 aa7.55□□□□□ -1.2
VPS11-203ENST00000529545 TAF9Q16594 264 aa7.55□□□□□ -1.2
VPS11-203ENST00000529545 TTMPQ5BVD1 217 aa7.55□□□□□ -1.2
VPS11-203ENST00000529545 GPR157Q5UAW9 335 aa7.55□□□□□ -1.2
VPS11-203ENST00000529545 ZNF613Q6PF04 617 aa7.55□□□□□ -1.2
VPS11-203ENST00000529545 TTC33Q6PID6 262 aaPredicted RBP7.55□□□□□ -1.2
VPS11-203ENST00000529545 NANOGNBQ7Z5D8 188 aa7.55□□□□□ -1.2
VPS11-203ENST00000529545 ARMC8Q8IUR7 673 aa7.55□□□□□ -1.2
VPS11-203ENST00000529545 ZNF283Q8N7M2 679 aa7.55□□□□□ -1.2
VPS11-203ENST00000529545 OR2Z1Q8NG97 314 aa7.55□□□□□ -1.2
VPS11-203ENST00000529545 OR10S1Q8NGN2 331 aa7.55□□□□□ -1.2
VPS11-203ENST00000529545 RAB40AQ8WXH6 277 aa7.55□□□□□ -1.2
VPS11-203ENST00000529545 FAM71F1Q96KD3 344 aaPredicted RBP7.55□□□□□ -1.2
VPS11-203ENST00000529545 MAGEB18Q96M61 343 aa7.55□□□□□ -1.2
VPS11-203ENST00000529545 ZNF347Q96SE7 839 aa7.55□□□□□ -1.2
VPS11-203ENST00000529545 SSBP3Q9BWW4 388 aaPredicted RBP7.55□□□□□ -1.2
VPS11-203ENST00000529545 WDR55Q9H6Y2 383 aaPredicted RBP7.55□□□□□ -1.2
VPS11-203ENST00000529545 SLCO1B3Q9NPD5 702 aa7.55□□□□□ -1.2
VPS11-203ENST00000529545 MAN2C1Q9NTJ4 1040 aa7.55□□□□□ -1.2
VPS11-203ENST00000529545 DCAF16Q9NXF7 216 aa7.55□□□□□ -1.2
VPS11-203ENST00000529545 TAS2R5Q9NYW4 299 aa7.55□□□□□ -1.2
VPS11-203ENST00000529545 C1RLQ9NZP8 487 aa7.55□□□□□ -1.2
VPS11-203ENST00000529545 ZIM2Q9NZV7 527 aa7.55□□□□□ -1.2
VPS11-203ENST00000529545 KIF17Q9P2E2 1029 aa7.55□□□□□ -1.2
VPS11-203ENST00000529545 STX18Q9P2W9 335 aaKnown RBP7.55□□□□□ -1.2
VPS11-203ENST00000529545 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.55□□□□□ -1.2
VPS11-203ENST00000529545 KLHL21Q9UJP4 597 aa7.55□□□□□ -1.2
VPS11-203ENST00000529545 ZNF229Q9UJW7 825 aa7.55□□□□□ -1.2
VPS11-203ENST00000529545 PPP1R3CQ9UQK1 317 aa7.55□□□□□ -1.2
VPS11-203ENST00000529545 RNF114Q9Y508 228 aa7.55□□□□□ -1.2
VPS11-203ENST00000529545 SOX21Q9Y651 276 aaPredicted RBP7.55□□□□□ -1.2
VPS11-203ENST00000529545 LOC100509620A0A075B734 347 aa7.54□□□□□ -1.2
VPS11-203ENST00000529545 IGHV2-70DA0A0C4DH43 119 aa7.54□□□□□ -1.2
VPS11-203ENST00000529545 MDFIC2A0A1B0GVS7 189 aa7.54□□□□□ -1.2
VPS11-203ENST00000529545 GMNCA6NCL1 334 aa7.54□□□□□ -1.2
VPS11-203ENST00000529545 SLC22A31A6NKX4 558 aa7.54□□□□□ -1.2
VPS11-203ENST00000529545 CEACAM18A8MTB9 384 aa7.54□□□□□ -1.2
VPS11-203ENST00000529545 F5H0A9 414 aaPredicted RBP7.54□□□□□ -1.2
VPS11-203ENST00000529545 BLOC1S5-TXNDC5H3BN57 136 aa7.54□□□□□ -1.2
VPS11-203ENST00000529545 IFNL4K9M1U5 179 aa7.54□□□□□ -1.2
VPS11-203ENST00000529545 CHP2O43745 196 aa7.54□□□□□ -1.2
VPS11-203ENST00000529545 FMO6PO60774 539 aa7.54□□□□□ -1.2
VPS11-203ENST00000529545 WNT2P09544 360 aa7.54□□□□□ -1.2
VPS11-203ENST00000529545 TUBG1P23258 451 aa7.54□□□□□ -1.2
VPS11-203ENST00000529545 PPIBP23284 216 aaKnown RBP7.54□□□□□ -1.2
VPS11-203ENST00000529545 SLC6A2P23975 617 aa7.54□□□□□ -1.2
VPS11-203ENST00000529545 GATA4P43694 442 aa7.54□□□□□ -1.2
VPS11-203ENST00000529545 DAP3P51398 398 aaKnown RBP7.54□□□□□ -1.2
VPS11-203ENST00000529545 RPL15P61313 204 aaKnown RBP7.54□□□□□ -1.2
VPS11-203ENST00000529545 MRPS34P82930 218 aaKnown RBP7.54□□□□□ -1.2
VPS11-203ENST00000529545 SGCAQ16586 387 aa7.54□□□□□ -1.2
VPS11-203ENST00000529545 DEFB112Q30KQ8 113 aa7.54□□□□□ -1.2
VPS11-203ENST00000529545 SPRNQ5BIV9 151 aa7.54□□□□□ -1.2
VPS11-203ENST00000529545 ASPHD2Q6ICH7 369 aa7.54□□□□□ -1.2
VPS11-203ENST00000529545 ZNF620Q6ZNG0 422 aa7.54□□□□□ -1.2
VPS11-203ENST00000529545 RHOUQ7L0Q8 258 aa7.54□□□□□ -1.2
VPS11-203ENST00000529545 NLRC3Q7RTR2 1065 aa7.54□□□□□ -1.2
VPS11-203ENST00000529545 COMTD1Q86VU5 262 aa7.54□□□□□ -1.2
VPS11-203ENST00000529545 C1QL4Q86Z23 238 aa7.54□□□□□ -1.2
VPS11-203ENST00000529545 TMEM86BQ8N661 226 aa7.54□□□□□ -1.2
VPS11-203ENST00000529545 NOXO1Q8NFA2 376 aa7.54□□□□□ -1.2
VPS11-203ENST00000529545 AKR7LQ8NHP1 331 aa7.54□□□□□ -1.2
VPS11-203ENST00000529545 VANGL1Q8TAA9 524 aaPredicted RBP7.54□□□□□ -1.2
VPS11-203ENST00000529545 MCHR1Q99705 422 aa7.54□□□□□ -1.2
VPS11-203ENST00000529545 RSPO3Q9BXY4 272 aaPredicted RBP7.54□□□□□ -1.2
VPS11-203ENST00000529545 PRDM13Q9H4Q3 707 aa7.54□□□□□ -1.2
VPS11-203ENST00000529545 MARCH7Q9H992 704 aa7.54□□□□□ -1.2
VPS11-203ENST00000529545 TCF7L1Q9HCS4 588 aa7.54□□□□□ -1.2
VPS11-203ENST00000529545 TUBG2Q9NRH3 451 aa7.54□□□□□ -1.2
VPS11-203ENST00000529545 FRRS1LQ9P0K9 344 aa7.54□□□□□ -1.2
VPS11-203ENST00000529545 MIOXQ9UGB7 285 aa7.54□□□□□ -1.2
VPS11-203ENST00000529545 IL19Q9UHD0 177 aa7.54□□□□□ -1.2
VPS11-203ENST00000529545 WNK1Q9H4A3 2382 aa7.54□□□□□ -1.2
VPS11-203ENST00000529545 KIR2DS1A0A191URI9 304 aa7.53□□□□□ -1.2
VPS11-203ENST00000529545 KPNA4O00629 521 aaPredicted RBP7.53□□□□□ -1.2
VPS11-203ENST00000529545 TRMUO75648 421 aaKnown RBP7.53□□□□□ -1.2
VPS11-203ENST00000529545 ACADSP16219 412 aa7.53□□□□□ -1.2
VPS11-203ENST00000529545 SELEP16581 610 aa7.53□□□□□ -1.2
VPS11-203ENST00000529545 CDAP32320 146 aa7.53□□□□□ -1.2
VPS11-203ENST00000529545 PCBD1P61457 104 aa7.53□□□□□ -1.2
VPS11-203ENST00000529545 ERVK-25P63136 954 aa7.53□□□□□ -1.2
VPS11-203ENST00000529545 PSG4Q00888 419 aa7.53□□□□□ -1.2
VPS11-203ENST00000529545 CD47Q08722 323 aa7.53□□□□□ -1.2
VPS11-203ENST00000529545 BST1Q10588 318 aa7.53□□□□□ -1.2
VPS11-203ENST00000529545 PSG7Q13046 419 aa7.53□□□□□ -1.2
VPS11-203ENST00000529545 SCARB2Q14108 478 aa7.53□□□□□ -1.2
VPS11-203ENST00000529545 HIST3H3Q16695 136 aa7.53□□□□□ -1.2
VPS11-203ENST00000529545 TMEM255AQ5JRV8 349 aa7.53□□□□□ -1.2
VPS11-203ENST00000529545 C10orf128Q5T292 105 aa7.53□□□□□ -1.2
VPS11-203ENST00000529545 BRD3OSQ6XYD6 125 aa7.53□□□□□ -1.2
VPS11-203ENST00000529545 Q6YL49 198 aa7.53□□□□□ -1.2
VPS11-203ENST00000529545 C8orf86Q6ZUL3 223 aa7.53□□□□□ -1.2
VPS11-203ENST00000529545 RFPL4BQ6ZWI9 263 aa7.53□□□□□ -1.2
VPS11-203ENST00000529545 PTOV1Q86YD1 416 aa7.53□□□□□ -1.2
VPS11-203ENST00000529545 POU5F2Q8N7G0 328 aa7.53□□□□□ -1.2
VPS11-203ENST00000529545 NPEPL1Q8NDH3 523 aa7.53□□□□□ -1.2
VPS11-203ENST00000529545 OR8B3Q8NGG8 313 aa7.53□□□□□ -1.2
VPS11-203ENST00000529545 TBC1D15Q8TC07 691 aa7.53□□□□□ -1.2
VPS11-203ENST00000529545 ITLN1Q8WWA0 313 aa7.53□□□□□ -1.2
VPS11-203ENST00000529545 NSMAFQ92636 917 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms