RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 NMD3Q96D46 503 aaKnown RBP6.96□□□□□ -1.3
SSBP3-211ENST00000528787 MROQ9BYG7 248 aa6.96□□□□□ -1.3
SSBP3-211ENST00000528787 WDR76Q9H967 626 aa6.96□□□□□ -1.3
SSBP3-211ENST00000528787 MARCH7Q9H992 704 aa6.96□□□□□ -1.3
SSBP3-211ENST00000528787 HINT3Q9NQE9 182 aaKnown RBP6.96□□□□□ -1.3
SSBP3-211ENST00000528787 SLC17A5Q9NRA2 495 aa6.96□□□□□ -1.3
SSBP3-211ENST00000528787 EIF3KQ9UBQ5 218 aaKnown RBP6.96□□□□□ -1.3
SSBP3-211ENST00000528787 LAMP5Q9UJQ1 280 aa6.96□□□□□ -1.3
SSBP3-211ENST00000528787 COA3Q9Y2R0 106 aaPredicted RBP6.96□□□□□ -1.3
SSBP3-211ENST00000528787 ALPK2Q86TB3 2170 aa6.96□□□□□ -1.3
SSBP3-211ENST00000528787 SPTBN1Q01082 2364 aaKnown RBP6.96□□□□□ -1.3
SSBP3-211ENST00000528787 CLEC18AA5D8T8 446 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 ZNF878C9JN71 531 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 PRSS44E7EML9 344 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 E9PQ18 207 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 ZNF670-ZNF695F2Z2N8 137 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 H7C1C5 153 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 SGCEO43556 437 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 PRKYO43930 277 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 LYNP07948 512 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 CCDC159P0C7I6 412 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 PIPP12273 146 aaPredicted RBP6.95□□□□□ -1.3
SSBP3-211ENST00000528787 COX6B1P14854 86 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 HSD11B1P28845 292 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 SELENOVP59797 346 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 ISL1P61371 349 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 LCN6P62502 163 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 RAB1AP62820 205 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 RUNX1T1Q06455 604 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 EGR3Q06889 387 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 FAM27E3Q08E93 113 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 RAB35Q15286 201 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 MOGQ16653 247 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 PCK2Q16822 640 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 ZNF362Q5T0B9 420 aaPredicted RBP6.95□□□□□ -1.3
SSBP3-211ENST00000528787 AADACL4Q5VUY2 407 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 PLXDC2Q6UX71 529 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 SEZ6L2Q6UXD5 910 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 CLEC18BQ6UXF7 455 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 TMPRSS11AQ6ZMR5 421 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 PLEKHG7Q6ZR37 379 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 USP51Q70EK9 711 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 FAM220AQ7Z4H9 259 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 ERI1Q8IV48 349 aaKnown RBP6.95□□□□□ -1.3
SSBP3-211ENST00000528787 LIX1LQ8IVB5 337 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 ENTHD1Q8IYW4 607 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 CLEC18CQ8NCF0 446 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 OR4F15Q8NGB8 312 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 OR5L1Q8NGL2 311 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 OR9Q1Q8NGQ5 310 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 OR6N2Q8NGY6 317 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 NRG4Q8WWG1 115 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 PTP4A1Q93096 173 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 S100PBPQ96BU1 408 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 ZNF582Q96NG8 517 aaPredicted RBP6.95□□□□□ -1.3
SSBP3-211ENST00000528787 DDOQ99489 341 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 COQ7Q99807 217 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 BCL2L14Q9BZR8 327 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 ELOVL3Q9HB03 270 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 RASSF1Q9NS23 344 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 PLCXD1Q9NUJ7 323 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 PLEK2Q9NYT0 353 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 GPR160Q9UJ42 338 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 ZNF391Q9UJN7 358 aa6.95□□□□□ -1.3
SSBP3-211ENST00000528787 HEATR1Q9H583 2144 aaKnown RBP6.94□□□□□ -1.3
SSBP3-211ENST00000528787 NKX2-6A6NCS4 301 aa6.94□□□□□ -1.3
SSBP3-211ENST00000528787 ACOD1A6NK06 481 aa6.94□□□□□ -1.3
SSBP3-211ENST00000528787 FAM183AA6NL82 134 aa6.94□□□□□ -1.3
SSBP3-211ENST00000528787 H3BSA7 217 aa6.94□□□□□ -1.3
SSBP3-211ENST00000528787 ZNF593O00488 134 aaPredicted RBP6.94□□□□□ -1.3
SSBP3-211ENST00000528787 FAM20BO75063 409 aa6.94□□□□□ -1.3
SSBP3-211ENST00000528787 SULT1C4O75897 302 aa6.94□□□□□ -1.3
SSBP3-211ENST00000528787 IGKV3-15P01624 115 aa6.94□□□□□ -1.3
SSBP3-211ENST00000528787 SERPINA5P05154 406 aa6.94□□□□□ -1.3
SSBP3-211ENST00000528787 KRT8P05787 483 aa6.94□□□□□ -1.3
SSBP3-211ENST00000528787 CD3EP07766 207 aa6.94□□□□□ -1.3
SSBP3-211ENST00000528787 IGFBP1P08833 259 aaPredicted RBP6.94□□□□□ -1.3
SSBP3-211ENST00000528787 SPARCP09486 303 aa6.94□□□□□ -1.3
SSBP3-211ENST00000528787 GAAP10253 952 aa6.94□□□□□ -1.3
SSBP3-211ENST00000528787 BMP4P12644 408 aa6.94□□□□□ -1.3
SSBP3-211ENST00000528787 SLC2A5P22732 501 aa6.94□□□□□ -1.3
SSBP3-211ENST00000528787 CFL1P23528 166 aaKnown RBP6.94□□□□□ -1.3
SSBP3-211ENST00000528787 DCTDP32321 178 aa6.94□□□□□ -1.3
SSBP3-211ENST00000528787 NTF4P34130 210 aa6.94□□□□□ -1.3
SSBP3-211ENST00000528787 POLR2IP36954 125 aaKnown RBP6.94□□□□□ -1.3
SSBP3-211ENST00000528787 RAD52P43351 418 aa6.94□□□□□ -1.3
SSBP3-211ENST00000528787 GDI2P50395 445 aaKnown RBP6.94□□□□□ -1.3
SSBP3-211ENST00000528787 TPTEP56180 551 aa6.94□□□□□ -1.3
SSBP3-211ENST00000528787 FMODQ06828 376 aa6.94□□□□□ -1.3
SSBP3-211ENST00000528787 ZNF829Q3KNS6 432 aaPredicted RBP6.94□□□□□ -1.3
SSBP3-211ENST00000528787 ELFN2Q5R3F8 820 aa6.94□□□□□ -1.3
SSBP3-211ENST00000528787 DMRTC2Q8IXT2 367 aaPredicted RBP6.94□□□□□ -1.3
SSBP3-211ENST00000528787 LRRC18Q8N456 261 aa6.94□□□□□ -1.3
SSBP3-211ENST00000528787 ACBD7Q8N6N7 88 aa6.94□□□□□ -1.3
SSBP3-211ENST00000528787 OTOSQ8NHW6 89 aa6.94□□□□□ -1.3
SSBP3-211ENST00000528787 C11orf40Q8WZ69 217 aa6.94□□□□□ -1.3
SSBP3-211ENST00000528787 ATF6BQ99941 703 aa6.94□□□□□ -1.3
SSBP3-211ENST00000528787 ZNF416Q9BWM5 594 aa6.94□□□□□ -1.3
SSBP3-211ENST00000528787 OPA3Q9H6K4 179 aa6.94□□□□□ -1.3
SSBP3-211ENST00000528787 MOB1AQ9H8S9 216 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms